Journal of Bioloscel Physics OO: 1-28, 2003. 1
18.2003 Aluwer Academic Publishers. Printed inthe Netherlands
Models of the Collective Behavior of Proteins in
Cells: Tubulin, Actin and Motor Proteins
JA. TUSZYNSKT and J.A. BROWN
Department of Physics, Universiy ofAlbere, Edmonton, Albena, T6G 211, Canada
“also ote Laboratory of Bimolecular Dynamics, Catholic University of Lewven, Celesiinenaan
2000, B-3001, Belgium
D. SEPT.
Department of Biomedicad Engineering, Center for Computational Biology. Washington University,
Campus Box 1087, One Brookings Drive St. Louis, MO 63130-4898, USA
Abstract, One of the most important issues of molecular biophysics is the complex and mult
Functional behavior ofthe cell's eytesheleton. Interiors of living cells are sructurlly organized by
the cytoskeleton networks of filamentous protein polymers: microtubules, actin and intermediate
filaments with motor proteins providing force and directionality needed for transport processes.
“Microtubules (M's) take active parti material tansport within the cell, constitute the most rigid
clement ofthe cell and henoe foond many uses in cell motility (eg, lagella and cis). At present
there is, however, no quanttvelypeediciable explanation of how these important phenomena are
orchestrated at a molecular level Moreover, microtubules have been demonsuated to selF-organize
Jeading to patern formation, We discuss here several models which attempt to shed light on the
assembly of microtubules and their interactions with motor proves. Subsequently, an overview of
‘sctn filaments and thir properties is given with particlac emphasis on actin assembly processes.
‘The lengths of set filaments have been reported that were foie by spontaneous polymerization
of highly purified atin monomers after Ibeling with todamine-phalfldts. Te length tisrbutions
fre exponential with a nian of about 7 jan. This lengih iy independent of tbe inital cancentra-
tion of actin monomer, an observation inconsistent with 2 sirmpe nuclestion-
J.A. Tuszynski, J.M. Dixon and Y. Engelborghs: On The Relationship Between The Radiative Rate Constant and The Fluorescence Intensity in Organic Fluorophores
D. Sept and J.A. Tuszynski: A Landau-Ginzburg Model of The Co-Existence of Free Tubulin and Assembled Microtubules in Nucleation and Oscillations Phenomena
S. Portet, J.A. Tuszynski, J.M. Dixon and M.V. Sataric: Models of Spatial and Orientational Self-Organization of Microtubules Under The Influence of Gravitational Fields
J.A. Tuszynski, T. Luchko, E.J. Carpenter and E. Crawford: Results of Molecular Dynamics Computations of Structural and Electrostatic Properties of Tubulin and Their Consequences For Microtubules
H.Bolterauer, J. A. Tuszynski, E. Unger: Directed Binding: A Novel Physical Mechanism That Describes The Directional Motion of Two-Headed Kinesin Motor Proteins
P. Chelminiak, R. Marsh, J.A. Tuszynski, J.M. Dixon, K.J.E. Vos: Investigations of The Asymptotic Time Dependence in The Fractal Pharmacokinetics of A Two-Compartment Model