Beruflich Dokumente
Kultur Dokumente
Doi: 10.1111/j.1365-3059.2011.02553.x
Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, PO Box 34, AlKhoud 123, Oman; and bCenter for Biodiversity, Functional and Integrative Genomics, Universidade do Algarve, Campus de Gambelas, 8005139 Faro, Portugal
A study was conducted to characterize occurrence, molecular variability and potential sources of Citrus tristeza virus (CTV) in Oman. A survey during 2009 and 2010 showed that CTV occurs in most (91%) of the surveyed districts. Moderate to high levels of infection with CTV in lime were detected in northern Oman (1563%) compared to the south (012%). This could be related to the continuous introduction of infected citrus germplasm in the north from abroad, where CTV was detected in 45% of citrus seedlings imported from Syria, Lebanon, India, Pakistan and Egypt. CTV was detected for the rst time in sweet lime, sweet lemon, citron, mandarin, sweet orange and sour orange and was found to be associated with stem pitting, stunting, leaf curling and vein clearing symptoms in many of the infected trees and seedlings in Oman. Bi-directional reverse transcription-PCR analysis of the coat protein (CP) gene of 22 randomly selected CTV-positive samples provided evidence that severe strains of CTV exist in Oman. Cloning and sequencing the CP gene of six isolates showed that they have 91100% nucleotide identity with each other and 9699% with representative isolates from other parts of the world. Phylogenetic analysis of the CTV isolates showed that four belong to CTV Group 4. However, two isolates formed a separate clade with 100% bootstrap support for separation from Group 5. Phylogenetic analysis and coefcient of differentiation values suggest that the two isolates from Oman constitute a new CTV phylogenetic group. Keywords: CTV phylogeny, lime, Tristeza viroids. Citrus tristeza virus (CTV), a member of the genus Closterovirus of the Closteroviridae family, is the most destructive viral pathogen of citrus in the world. The virus has killed over 100 million citrus trees in Spain, Brazil and Argentina, especially those that are grafted on sour orange rootstocks (Moreno et al., 2008). CTV can cause different symptoms on citrus trees depending on the strain of the virus, citrus species, environmental conditions and propagation method. These include decline of citrus trees grafted on sour orange rootstocks, stem pitting symptoms on acid lime, pummelo (C. grandis), grapefruit (C. paradise) and sweet orange, and seedling yellows (McClean, 1960; Garnsey & Lee, 1988; Lee & Bar-Joseph, 2000; Brlansky et al., 2002). CTV can be transmitted by propagation of infected buds, import of diseased planting material and several aphid species such as Toxoptera citricida, Aphis gossypii and A. spiraecola (Roistacher & Bar-Joseph, 1987). Citrus tristeza virus was rst detected in Oman in 1986 in seedlings of lemon, mandarin and grapefruit imported from India (Bove, 1995). However, little attention has been given to the disease. A preliminary survey by the Ministry of Agriculture in 2008 in 10 different farms in Oman showed that the disease was present in four of them (MA, 2009). However, because that
Introduction
Citrus is an important genus of fruit crops in the world. In Oman, acid limes (Citrus aurantifolia) are the fourth major fruit crop in terms of production after date palms, bananas and mangoes (FAO, 2010). There are over 350 000 lime trees across the country (MAF, 2005). Other citrus species grown in Oman are: sweet lime (C. limettioides), sweet orange (C. sinensis), citron (C. medica), mandarin (C. reticulata), lemon (C. limon) and sour orange (C. aurantium). Citrus trees are found in all regions in Oman, with production being concentrated in the Al-Batinah region. Most citrus species are grown on their own, with grafting being a very limited practice. However, citrus propagation is commonly practised in Oman using seeds and layering. Most lime and sweet lime plants are propagated locally, while many other citrus species are imported via nurseries from countries such as India, Pakistan, Syria, Lebanon and Egypt. Most species of citrus are susceptible to several plant pathogenic fungi, prokaryotes, viruses, nematodes and
*E-mail: alsadi@squ.edu.om
A. M. Al-Sadi et al.
survey was very limited, there is still little known about the distribution of CTV in Oman, or which citrus species are affected. In addition, there is a lack of knowledge about the most common symptoms associated with CTV infection and the potential role of commercial nurseries in disseminating CTV infected citrus seedlings. This establishes a barrier towards development and implementation of effective management strategies for CTV in the country. Biological indexing has been used in the past for strain differentiation in CTV. However, because indexing is time consuming (up to 1215 months) (Mukhopadhyay, 2004; Moreno et al., 2008), several serological and molecular methods have been developed over the past two decades for characterization of CTV strains. The nding that severe isolates of CTV (decline or stem pitting inducing isolates) differ from the mild isolates at position 371 of the coat protein (CP) gene (Niblett et al., 2000) has helped develop selective primers, which through bi-directional reverse transcription PCR (RT-PCR) has helped in accurate, sensitive and fast characterization of CTV strains (Cevik et al., 1996; Niblett et al., 2000; Huang et al., 2004). Although this test has proved to be efcient in differentiating CTV strains from Florida and some other places into two types, severe and mild (Huang et al., 2004; Jiang et al., 2008), it is not clear whether Omani lime trees developing severe CTV symptoms can be identied using the test. Restriction analysis as well as phylogenetic analysis of the CP gene of CTV isolates has helped group CTV haplotypes from different parts of the world into seven different groups (Mawassi et al., 1993; Zemzami et al., 2002; Nolasco et al., 2009). The grouping was found to be related to biological activities of the haplotypes (Nolasco et al., 2009). A recent study by Nolasco et al. (2009) on more than 140 CTV haplotypes from 20 different parts of the world has shown that all belong to one of the seven CTV groups. Oman lies on the far eastern part of the Arabian Peninsula, a place which has been considered the transition point through which lime and some other citrus species have been moved from India and China to the west (Davies & Albrigo, 1994). Because no isolates were included in the study by Nolasco et al. (2009) from Oman or other parts of the Arabian Peninsula, it is not known if isolates from this part of the world belong to any of the previously described seven groups. In addition, there is a lack of knowledge concerning molecular variability of CTV from Oman, so that it is not known whether CTV in Oman originates from common or multiple sources. This study was therefore conducted to characterize occurrence, phylogeny and sources of CTV in Oman. Specic objectives include: (i) to characterize the distribution of CTV in Oman; (ii) to nd out whether commercial nurseries could play a role in spreading CTV infected seedlings; and (iii) to characterize the phylogenetic relationship of CTV isolates from Oman with CTV from other parts of the world. Investigations into these aspects of the disease may help establish a solid background about distribution and molecular variability of CTV in
Iran Dibba Oman Mahadha Yanqul Dhank Rustaq Samael Nizwa Ibri Ibra Bahla Mudhaibi Madha
UAE KSA
Salalah
Taqa Marbat
Figure 1 A map of Oman showing the main districts where samples were collected.
tunala margarite) (6). Out of the 119 samples, 86 seedlings were imported from Syria, Egypt, Lebanon, Jordon, Pakistan or India, while 33 seedlings were propagated locally. The collection of samples from nurseries was from seedlings which had just arrived from the places of origin (27) and also from imported seedlings which had been kept in nurseries for 212 weeks (92).
primer, 2 lL of QIAGEN One-step RT-PCR Enzyme Mix, 10 lL of the RNA sample and RNase-free water up to 50 lL. The cycling conditions were as follows: reverse transcription at 50C for 30 min, then one cycle at 95C for 15 min, followed by 40 cycles of 94C for 30 s, 60C for 30 s, and 72C for 1 min. The nal extension was at 72C for 10 min. The RT-PCR products were run on 2% agarose gels for 40 min at 120 V and 110 mA and visualized under UV after ethidium bromide staining.
A. M. Al-Sadi et al.
symptoms and two samples from lime trees developing leaf curling symptoms. DNA extraction from leaf midribs and petioles of the 22 samples was achieved using RNeasy Plant Mini Kit (QIAGEN) according to the manufacturers protocol. Bi-directional RT-PCR was conducted for each sample using the primers HCP1 (5-ATG GAC GAC GAA ACA AAG AA-3), HCP2 (5 -TCA ACG TGT GTT GAA TTT CC-3 ), CP3 (5 -TTT GGA CTG ACG TCG TGT T-3 ) and CP4 (5 -TTA CCA ATA CCC TTA GAA TTA T-3 ) (Huang et al., 2004). QIAGEN One-Step RT-PCR master mix was used. The master mix for each sample was as before, using 06 lM of each of the above primers. The RT-PCR conditions were: reverse transcription at 50C for 50 min, initial PCR activation at 95C for 15 min, 35 cycles of denaturation at 94C for 1 min, annealing at 50C for 2 min and extension at 72C for 2 min. The nal extension step was at 72C for 20 min. Successful amplication of PCR products was checked by running 10 lL of the PCR product on 2% agarose gels. According to Huang et al. (2004) and Jiang et al. (2008), the CTV-positive samples are expected to produce a fragment of 672 bp (HCP1 HCP2). However, fragment sizes of 320 (HCP1 CP3) and 392 bp (HCP2 CP4) indicate the potential presence of different haplotypes similar to those found in severe and mild isolates in other studies (Huang et al., 2004).
The puried samples were then cloned using MGTM pTOP TA V2 vector and sequenced at Macrogen Inc. Sequencing of the CP gene for each isolate was done from three randomly selected bacterial colonies containing the insert. The forward and backward CP gene sequences for each isolate were rst aligned together and edited using CHROMASPRO. The resulting CP gene sequences were then compared to each other and to worldwide collections of sequences deposited at the National Center for Biotechnology Information (NCBI) using BLAST searches. Search for evidence of recombination events between these and other GenBank available sequences was performed with the RDP software (Martin et al., 2005). The six sequences were aligned with 144 CP gene sequences from worldwide origins referred to in Nolasco et al. (2009) using CLUSTALW (Thompson et al., 1994). A neighbour-joining tree was constructed based on the matrix of pairwise distances obtained using the Kimura 2 parameter evolutionary model (MEGA5) (Tamura et al., 2011). Bootstrap 80% majority-rule consensus trees were generated using 1000 replications. The coefcient of differentiation was estimated according to Nei & Kumar (2000). The coefcient of differentiation is the ratio of the mean inter-group diversity over mean diversity for the entire population. If close to zero, the population is not structured (all diversity is outside the groups); if 1, all diversity falls within the specied groups.
Results
Distribution of CTV
Assessing the presence of Citrus tristeza virus using ELISA in 526 lime samples collected from 22 different districts showed that the virus was associated with 102 (194%) lime samples (Table 2). CTV in lime was detected in all the surveyed districts, except in Taqa and Marbat. Recovery of CTV from different districts varied from 0 to 63% (Table 2). Moderate to high levels of infection (1563%) were observed in districts that are located in the northern part of Oman (Table 2, Fig. 1). Limes in districts that are located in the southern part of the country were found to have low levels of infection (012%). The virus was also detected at different frequencies in sweet lime, citron, mandarin, sweet lemon (C. limetta), sweet orange and sour orange (Table 3). Symptoms typical of CTV infection were detected in some of the citrus species that were surveyed. Stem pitting was found to be the most common symptom in the eld. Other symptoms included yellowing, curling and vein clearing of leaves of different citrus species as well as stunting, especially in sweet orange grafted on sour orange rootstocks and in lime trees (Table 3). Association of CTV with these symptoms in the affected trees was conrmed using ELISA tests.
Table 1 Characteristics of Omani Citrus tristeza virus isolates used in the phylogenetic analysis Isolate accession no.a W001-4B W071-3 W093-3 W121-1 W140-1 W140-2
a
Field symptoms Stem pitting Stem pitting Stem pitting Symptomless Symptomless Symptomless
Table 2 Distribution of Citrus tristeza virus (CTV)-infected acid lime trees (C. aurantifolia) in different districts in Oman Sample size (farms) 6 6 9 6 10 2 7 6 1 7 6 6 5 5 8 9 13 5 6 4 5 5 137 Sample size (trees) 26 37 30 22 40 10 16 40 4 17 17 13 29 19 10 36 33 31 30 15 31 20 526 Infected treesa 10 9 14 4 10 1 10 4 1 6 4 4 5 1 4 7 5 1 1 0 1 0 102 % trees infected 38 24 47 18 25 10 63 10 25 35 24 31 17 5 40 19 15 3 3 0 3 0
Locations Barka Rustaq Shinas Sohar Suwaiq Boushar Seeb Qurayat Dhank Yanqul Ibri Mahadha Bahla Nizwa Samael Dibba Madha Ibra Mudhaibi Marbat Salalah Taqa Total
sweet lime and Tahiti lime, with frequencies of infection ranging from 0 to 100% (mean 45%; Table 4). CTV was detected in citrus seedlings coming from Egypt, Pakistan, Syria, Lebanon and India as well as from citrus seedlings originating from Oman. The virus was detected in seedlings at the time of arrival from the country of origin as well as in seedlings that had been imported from abroad but kept in nurseries for 212 weeks.
a Presence and absence of CTV was based on ELISA test. A positive sample is considered a sample with absorbance of at least double the absorbance recorded for the negative control (absorbance measured at 405 nm).
Table 3 Citrus species infected with Citrus tristeza virus (CTV) in Oman Field symptoms Host Lime Sweet lime Sweet orange Citron Mandarin Lemon Sour orange Sweet lemon Total Sample size 526 29 23 10 6 5 5 3 607 No. (%) infected trees 102 (194) 4 (138) 4 (174) 3 (300) 2 (333) 0 1 (200) 1 (333) 117 (193) SP M L L L VC R R R ST L R M R R LC L R R L R L Locationa,b 1,2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22 1,3,5,8,12,16,17 1,3,5,8,12,16,20 2,4,5,8,16,17 5,12 1,5 3,16,17 12,16
SP, stem pitting; VC, vein clearing; ST, stunting; LC, leaf curling; R, rare (05%); L, low (615%); M, moderate (1640%); H, high (>40%); , not detected quantied. a 1: Bahla, 2: Bousher, 3: Barka, 4: Dhank, 5: Dibba, 6: Ibra, 7: Ibri, 8: Madha, 9: Mahadha, 10: Marbat, 11: Mudhaibi, 12: Nizwa, 13: Qurayat, 14: Rustaq, 15: Salalah, 16: Samael, 17: Seeb, 18: Shinas, 19: Sohar, 20: Suwaiq, 21: Taqa, 22: Yanqul. b Districts that are in bold indicate presence of CTV.
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Table 4 Detection of Citrus tristeza virus (CTV) in nursery seedlings originating from different countries Seedlings positive for CTVb Citrus species Lime Lemon Origin Oman India Lebanon Syria Egypt Egypt Pakistan Syria Jordon Egypt Syria Syria Syria Oman Oman Lebanon Oman Sample size (no. seedlings) 18 3 11 4 2 14 2 13 2 13 11 3 6 4 6 2 5 No. (%) of infected seedlingsa 9 3 5 4 0 3 2 7 0 4 5 1 3 0 4 2 1 (50%) (100%) (45%) (100%) (21%) (100%) (54%) (31%) (45%) (33%) (50%) (67%) (100%) (20%) Nursery + ? + ? ) + + + ) + + ) + ) + + + Just arriving + + + + ? ? ? + ? ? + + + ? + ? ?
Sweet orange
Based on RT-PCR analysis using primers PIN1 and PIN2. Detection of CTV in seedlings from nurseries or at the time of arrival where (+) means positive for CTV, ()) means not detected and (?) means not tested.
Table 5 RT-PCR analysis of Citrus tristeza virus (CTV) strains associated with 22 lime trees and seedlings RT-PCR product (bp)a
Discussion
Citrus tristeza virus was detected in most of the surveyed districts in Oman, with frequencies of infection ranging from 0 to 63% (mean 194%). Moderate to high levels of CTV infection (1563%) were detected in districts located in the northern part of Oman compared to the south (012%). The highest levels of CTV infection in the north could be related to the proximity of these districts to the entry sites of citrus seedlings into Oman as well as to the main nurseries that distribute and sell citrus seedlings. Support for this hypothesis is evident from the high level (45%) of infection observed in this study in citrus seedlings imported by nurseries from abroad. Previous studies have emphasized the role of nurseries in disseminating many citrus diseases, including CTV (Bove, 1995). The contribution of nurseries towards spread of CTV in Oman, as shown in this study, may necessitate future management programmes looking at obtaining clean planting material, as well as proper inspection of citrus material imported from abroad. Occurrence of CTV in most of the surveyed districts in Oman may indicate that CTV has been introduced into Oman and disseminated to different districts over a long period of time, or that multiple introductions are occurring. These hypotheses are supported by the occurrence of different CTV haplotypes with different CP sequences as well as of different CTV strains, as evident from the bi-directional RT-PCR test. Since no previous surveys have been undertaken to characterize occurrence of CTV in Oman, except a recent and limited survey by the Ministry of Agriculture in 2008 (MA, 2009), it is difcult to determine when CTV was rst introduced into the country. However, detection of CTV in
Plant Pathology (2011)
Growth stage
Field symptoms
Seedling Leaf curling yellowing 2 Symptomless 6 Fruiting Stem pitting 12 trees Leaf curling yellowing 2
a
Based on RT-PCR analysis using HCP1, HCP2, CP3 and CP4 primers. Samples with a fragment size of 320 bp indicate the potential presence of a severe strain; samples with fragment sizes of 320 bp and 392 bp indicate the potential presence of at least two different strains of CTV, mild and severe (Huang et al., 2004).
When compared to sequences in GenBank, the CP gene sequences of the Omani isolates clustered in different positions (Fig. 2). Isolates W001-4B, W071-3, W93-3 and W121-1 clustered, according to the grouping scheme proposed by Nolasco et al. (2009), in Group 4 along with the Florida decline-inducing isolate T3. Isolates W140-1 and W140-2 appear with a very good bootstrap support as a separate clade in the branch leading to Group 5. In the collapsed tree obtained from 144 worldwide sequences it can be seen that the W140 cluster separates from the closest group (Group 5) at a distance comparable to the divergence of some other groups (Fig. 2). To investigate whether this could be considered a different group, the coefcient of differentiation was estimated with the W140 haplotypes either included or not included in Group 5. The coefcient rises from 0775 to 0809 if W140 haplotypes are considered as a different group instead of part of Group 5.
(a)
Gp 1 Gp 2 Gp M Gp 5 W140-1 W W140-2 Gp 4 Gp 3b Gp 3a
(c)
C270-3-12 Argentina (Gp 5) C270-3-7 Argentina (Gp 5) 442-2 Croatia (Gp 5) 2-98 Madeira (Gp 5) PeralAC-31 Brazil (Gp 5) Col4 Colombia (Gp 5) Col1 Colombia (Gp 5) PeralAC-42 Brazil (Gp 5) ST1510 S Tome (Gp 5) 134B Reunion (Gp 5) 2-1-05 Madeira (Gp 5) BaraoB-4 Brazil (Gp 5) 15-118 Madeira (Gp 5) 010-8 Venezuela (Gp 5) CY98-30-1 Cyprus (Gp 5) 86 CY98-33-61 Cyprus (Gp 5) 86 CY94-39-1 Cyprus (Gp 5) 047-16 Venezuela (Gp 5) C320-5-21 Argentina (Gp 5) B249 Venezuela (Gp 5) C257-7-2 Argentina (Gp 5) 100 C320-5-22 Argentina (Gp 5) C257-2-27 Argentina (Gp 5) S78- 4 Jamaica (Gp 5) 100 99 100 S78-35 Jamaica (Gp 5) S133-31 Jamaica (Gp 5) W140-1 W140-2
004
003
002
001
000
(b)
98
443-13 Croatia (Gp 4) 441-3 Croatia (Gp 4) 441-2 Croatia (Gp 4) 443-4 Croatia (Gp 4) 15-8S Tome (Gp 4) 15-11 S Tome (Gp 4) 99 CY89-60-36 Cyprus (Gp 4) CY89-60-38 Cyprus (Gp 4) 134A Reunion (Gp4)
100
98
100
W001-4b W071-3 Oman W121-1 W93-3 T3 Florida (Gp 4) AN0-1 Egypt (Gp 4) K1-76 Egypt (Gp 4) K1-77 Egypt (Gp 4)
Oman
003
002
001
000
004
003
002
001
000
Figure 2 Phylogenetic tree showing relationship of CP gene sequences of six Citrus tristeza virus (CTV) isolates from Oman to haplotypes belonging to all groups (a), Group 4 (b) and Group 5 (c) as dened by Nolasco et al. (2009). The tree was constructed by the neighbourjoining method. Numbers close to the nodes represent the bootstrap values obtained from 1000 replications (values above 80 are shown).
nursery citrus seedlings imported from India in 1986 (Bove, 1995) supports the hypothesis that CTV could have been continuously introduced into Oman since that time or even before. Detection of CTV in citrus seedlings imported by nurseries from different countries is further evidence that CTV has been continuously introduced into Oman. The wide distribution of CTV across Oman could also be attributed to the use of layering in citrus propagation. Layering is commonly practised by farmers in Oman for propagation of citrus trees, especially lime. Previous studies have provided evidence for transmission of CTV via seedlings propagated vegetatively (BarJoseph & Lee, 1989). Because CTV is not known to be transmitted via citrus seeds (Bar-Joseph & Lee, 1989), detection of CTV in some lime trees originating from seeds (data not provided) may provide evidence that CTV could have been transmitted among some farms in Oman via aphids. A range of typical CTV symptoms was detected in citrus seedlings and trees that tested positive for CTV. Stem pitting was found to be the most common, especially in lime trees. Stunting was found to be common in sweet orange grafted on sour orange and in some affected lime trees. Leaf cupping of lime and vein clearing were also
Plant Pathology (2011)
detected and found to be common, especially in seedlings. This appears to be the rst record of association of CTV with these symptoms and with sweet orange, sour orange, sweet lime, sweet lemon, citron and mandarin in Oman. However, future studies may consider quantifying the amount of economic loss due to infection of citrus species with CTV. Molecular-based characterization of CTV strains in Oman provided evidence that there are at least two different CTV strains present. This was evident from RT-PCR analysis of the CP gene with the use of HCP1, HCP2, CP3 and CP4 primers for 22 CTV-positive samples. RT-PCR analysis of 12 samples obtained from lime trees showing stem pitting symptoms provided evidence that all the samples have severe CTV strains. This shows the efciency of the bi-directional RT-PCR test in discriminating severe strains of CTV, at least those that are causing stem pitting symptoms in Oman, which is in agreement with ndings obtained by Huang et al. (2004). A mixture of at least two strains (potentially severe and mild) was detected in samples obtained from symptomless lime seedlings and a tree and a seedling with mild symptoms, but not in trees developing stem pitting symptoms. This may suggest that the presence of a mild strain confers protection against the severe strain (cross-protection) and
A. M. Al-Sadi et al.
therefore masks or reduces severity of symptoms; a hypothesis that deserves further investigation. The six sequenced Omani isolates are in different groups (clades) with high bootstrap values which suggests that at least two introductions of divergent isolates have occurred in Oman. Also, the genetic similarity of CTV isolates from Oman and other countries conrms long distance movement by trafc of propagative material through nurseries. This is supported by detection of CTV in nursery seedlings imported from different countries. Variability of the Omani CTV isolates supports previous studies of existence of variation in CTV isolates infecting citrus in a particular location (Biswas, 2010; Melzer et al., 2010). Interestingly, two haplotypes that were sequenced (W140) clustered in a particular position in relation to the other CP groups. This suggests the existence of a new phylogenetic group separating from the Group 5 branch. The position of this clade could not be explained by recombination events (which were not detected) and the level of divergence at which it separates is comparable to the level of divergence of individualization of other groups. Additionally, the coefcient of differentiation increases when these haplotypes are considered apart from Group 5. This evidence supports the view that these sequences may constitute a new phylogenetic group. Given that these isolates were obtained from two symptomless lime seedlings, it remains to be seen if these kinds of haplotypes are widespread in Oman and associated with any particular symptomatology, or just represent some atypical CTV isolates. This study has provided evidence for widespread distribution of CTV in different regions of Oman and the association with several citrus species and eld symptoms. Due to the high level of infection with CTV (45%) of imported citrus seedlings, strict quarantine measures need to be introduced and implemented in order to save the citrus industry in Oman. In-depth analysis of CTV diversity in Oman and neighbouring countries in the Arabian Peninsula is required, especially after uncovering the existence of CTV haplotypes from Oman creating a new phylogenetic group. Biological indexing will be required to conrm association of CTV with many of the symptoms observed. Seedlings from which the W140 haplotypes were recovered are under close observation for eld symptoms, and pathogenicity tests are planned to uncover their biological characteristics.
References
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Acknowledgements
The authors would like to acknowledge Dalia Al-Khatib, Aisha Al-Ghaithi, Hanan Al-Moqbali, Safa AlMazroui, Amna Al-Jabri, staff from the Ministry of Agriculture and farmers for their help during surveys and laboratory work. Special thanks are due to Sultan Qaboos University for funding the study through the Strategic Research Project: Rejuvenating lime production in Oman; resolving current challenges (SR AGR CROP 08 01).
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