Beruflich Dokumente
Kultur Dokumente
GROWTH
& DESIGN
2009
VOL. 9, NO. 6
2539–2545
PerspectiVes
Anion-π Interactions in Crystal Structures: Commonplace or
Extraordinary?
ABSTRACT: An in-depth analysis of the distribution of anions about planar six-membered rings in the Cambridge Structural
Database reveals anion-π interactions with charge-neutral π systems to be extremely rare in crystal structures. The predominant
interaction motif is C-H · · · anion hydrogen bonding.
Arenes, and in particular electron-deficient arenes, form stable Although the majority of theoretical evidence concerns
adducts with anions via several interaction motifs.1,2 One of halides, there are surprisingly few structural examples of
these motifs, the anion-π interaction, has garnered considerable anion-π contacts involving halides. An extensive search of the
recent attention.2,3 Although discovered two decades ago,4 CSD was performed to locate all halide anions above arene π
renewed interest was sparked by four 2002 reports of electronic systems.12 The search criterion retained all structures with any
structure calculations suggesting the existence of complexes with halide anion located within 4.0 Å of the centroid of any electron-
anions centered over the face of charge-neutral arenes such as deficient six-membered ring. With the constraints that the
1,3,5-triazine,5 C6F6,6 trinitro and trifluorobenzene,7 and other π-system must be charge-neutral (not conjugated with a charged
perfluorinated arenes.8 Observations of favorable interactions species or bound to a metal cation), a total of 44 hits were
between formally negatively charged species and the π electron retained. Inspection of these structures revealed (i) that only a
clouds of uncharged aromatic rings were initially counterintui- couple of examples exhibited the characteristic directionality
tive, motivating further theoretical investigation. At this point expected for an anion-π interaction, that is, a halide located
over 150 calculated geometries have been reported, yielding a above the ring centroid, and (ii) that there were no actual
general consensus regarding the noncovalent nature of the examples for any of the anion-π complexes that had been
anion-π interaction and extensive evidence that this motif can studied theoretically.
lead to stable anion-arene adducts in the gas phase.2 In an effort Noting that direct X-ray verification of anion binding to
to obtain corroborating experimental evidence, a number of uncharged organic π receptors was lacking, structural determi-
researchers have searched the Cambridge Structural Database nations were performed on a series of crystals combining halide
(CSD)9 for examples of anion-π complexes. Here, however, salts with highly electron-deficient arenes.13 These structures,
consensus regarding the extent and interpretation of the crystal and others,12 exhibited geometries inconsistent with the anion-π
structure evidence is lacking. interaction. Rather than residing above the ring centroid, the
The first reported efforts involved searches for contacts halide is located above the ring periphery in close contact,
between any heteroatom bearing a lone pair (N, O, F, S, Cl, e∑vdw radii, with one ring atom. Such geometries have since
Br, or I) and the π system of either C6X3(NO2)3 or C6F5X (X ) been shown to be characteristic of weakly covalent σ interactions
any atom).6,7 A hit was declared when a heteroatom contacted rather than noncovalent anion-π interactions.2,12
all six arene carbons within the ∑vdw radii + 1.0 Å,10 in other
words, within relatively long contact distances of 4.17 (C · · · F) There have been two extensive searches for anion-π interac-
to 4.68 (C · · · I) Å.11 A total of 271 lone pair-π interactions tions involving anions other than halides. Differing search
were reported for C6X3(NO2)3, with 10 examples involving criteria have led to grossly different conclusions regarding the
anions.7 A total of 1944 lone pair-π interactions were observed occurrence of such interactions in the CSD. The first effort was
for C6F5X, with 27 examples involving anions.6 These results a search for anion-π interactions involving NO3-, ClO4-, BF4-,
were cited as experimental evidence for electron-rich species and PF6- with C6 (any phenyl ring) and C5N (pyridine,
to locate above electron-deficient arenes. bipyridine, terpyridine, and phenanthroline) rings.14 An anion
was considered to interact with the aromatic ring in a π fashion
* Corresponding author. Phone: (865)-574-6717. E-mail: haybp@ornl.gov. when the distance from any anion atom to the centroid was
10.1021/cg900308b CCC: $40.75 2009 American Chemical Society
Published on Web 04/09/2009
2540 Crystal Growth & Design, Vol. 9, No. 6, 2009 Perspectives
Figure 6. Molecular structure and CSD reference codes for the only
two contacts between Cl- and C6 arenes that exhibit the characteristic
anion-π geometry: Cl- located above the ring centroid (θ ) 90 (
10°); Cl- contacts all six carbon atoms within 3.65 Å (∑vdw radii +
0.2 Å). The interacting ring is indicated by thicker lines.
Figure 8. Molecular structures and CSD reference codes for the contacts
between ClO4-, BF4-, and PF6- anions and planar C6 rings that exhibit
characteristic anion-π geometries: the anion centroid is located over
the ring centroid (θ ) 90 ( 10°); anions contact the ring with three O
or F atoms such that each of the three contacting atoms are within
∑vdw radii + 0.2 Å of a ring atom. When more than one six-membered
ring is present, the interacting ring is indicated by thicker lines.
(12) Berryman, O. B.; Bryantsev, V. S.; Stay, D. P.; Johnson, D. W.; Hay,
B. P. J. Am. Chem. Soc. 2007, 129, 48.
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Figure 10. Distribution of 13,646 intermolecular contacts between any T. Angew. Chem. 2002, 41, 48.
N, O, S, F, Cl, Br, or I atom and any C6F5X ring (X ) any atom) in (18) Although anions have also been shown to bind the π systems of
the CSD. The gray area indicates data selected when the atom contacts cationic 6-membered arenes, the occurrence of such ion pairing is far
all six ring carbon atoms within 4.2 Å. less surprising. (a) Alkorta, I.; Elguero, J. J. Phys. Chem. 2003, 107,
9428. (b) Garau, C.; Quinoñero, D.; Frontera, A.; Ballester, P.; Costa,
13,646 contacts shown in Figure 10 actually resembles the A.; Deyà, P. M. New J. Chem. 2003, 370, 7. (c) Estarellas, C.; Frontera,
A.; Quinoñero, D.; Deyà, P. M. J. Chem. Theory Comput. 2008, 4,
geometry anticipated for a lone pair-π interaction.29
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Acknowledgment. This research was sponsored by the (19) (a) Malone, J. F.; Murray, C. M.; Charlton, M. H.; Docherty, R.;
Division of Chemical Sciences, Geosciences, and Biosciences, Lavery, A. J. J. Chem. Soc., Faraday Trans. 1997, 93, 3429. (b) Novoa,
Office of Basic Energy Sciences, U.S. Department of Energy, J. J.; Mota, F. Chem. Phys. Lett. 2000, 318, 345. (c) Bogdanovic, G. A.;
under Contract No. DE-AC05-00OR22725 with Oak Ridge Spasojevic-de Bire, A.; Zaric, S. D. Eur. J. Inorg. Chem. 2002, 1599.
National Laboratory managed by UT-Battelle, LLC. (20) Full details on methods used to generate random distribution histograms
are given as Supporting Information.
(21) (a) Dougherty, D. A.; Stauffer, D. A. Science 1990, 250, 1558. (b)
Supporting Information Available: Details of CSD search speci-
Ma, J. C.; Dougherty, D. A. Chem. ReV. 1997, 95, 1303.
fications, derivation of histograms corresponding to random distribu-
(22) (a) Kumpf, R. A.; Daugherty, D. A. Science 1993, 261, 1708. (b)
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e∑vdw radii.6,7 However, the actual contact distance used was e∑vdw (29) (a) The distribution shown in Figure 10 raises concerns over the validity
radii + 1.0 Å. Personal communication with C. Garau, Universitat de of a recent study claiming evidence for thousands of lone pair-π
les Illes Balears, Palma de Mallorca, Spain. interactions in the CSD. (b) Mooibroek, T. J.; Gamez, P.; Reedijk, J.
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Å; C, 1.70 Å; N, 1.55 Å; O, 1.52 Å; F, 1.47 Å; Cl, 1.75 Å; Br, 1.85;
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