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a r t i c l e
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Article history:
Received 28 May 2008
Received in revised form 12 September 2008
Accepted 23 September 2008
Available online 9 October 2008
Keywords:
Modied electrode
Hybridization
Nucleic acids
Polymer lm
a b s t r a c t
Immobilization and hybridization of oligonucleotides or specic-gene PCR product (DENV-1), a conserved
genomic sequence of the dengue virus, onto graphite electrode modied with poly(4-hydroxyphenylacetic
acid), were carried out with success using both direct electrochemical oxidation of guanine or redox
electroactive indicator ethidium bromide.
Studies of oligonucleotides hybridization with the complementary target showed a decrease of both guanosine
and adenosine current peaks, when compared with the peak previously obtained before the hybridization.
Immobilized ssDNA, DENV-1, was hybridized with various concentrations of target DNA. The interaction
between DENV-1 hybridized onto the modied graphite electrodes surface and the intercalator, ethidium
bromide, was observed by differential pulse voltammetry, monitoring the current change generated to the DNA
intercalator accumulated onto the modied electrode after DNA hybridization. For the determination of
complementary target, the proposed method exhibited a good dynamic range (1242 nmol L 1) and a low
detection limit (7.12 nmol L 1).
AFM images showed that the oligonucleotides or single-stranded DNA, DENV-1, before hybridization, had
roughness values lower than the double stranded obtained after hybridization.
The new surface obtained in these work, as well as the possibility of utilization of the same to monitor
hybridization events is a promising strategy for the development of DNA electrochemical biosensors.
2008 Elsevier B.V. All rights reserved.
1. Introduction
The chemical modication of the surface of electrodes offers great
potential to help in the identication between target compounds that
have similar characteristic redox, increasing the efciency and
applicability of electrochemical sensors [1]. The ability to control
and to modify the properties of the surfaces of the electrodes can
provide a variety of attractive effects, which can effectively collaborate
for the solution of problems presented by traditional electrochemical
sensors [2]. The use of polymer lms offers several advantages in the
construction of sensors, since they are relatively cheap materials, the
techniques for the production are simple, they can be deposited on
various types of substrates and the choice of different molecular
structures provides the construction of lms with different characteristics [3]. The modication of the molecular composition of the
electrode aims at improving sensitivity, selectivity and/or stability
allowing the tailoring of its response in order to meet analytical needs
[46].
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Fig. 2. Differential pulse voltammograms of graphite electrode modied with poly(4HPA) prepared in pH 0.5 (baseline-corrected), 100 scans, containing poly(G) (Ia), poly(A)
(IIa), before hybridization and after 20 min incubation with non-complementary target:
poly(G) (Ib), poly(A) (IIb), or complementary target: poly(C) (Ic), poly(T) (IIc).
Electrolyte: 0.1 mol L 1 acetate buffer, pH 4.7. Modulation amplitude: 0.05 mV. Pulse
interval: 0.2 s; 5 mV s 1.
reduction processes of the poly(4-HPA) lm. During the rst scan, the
oxidation current peak dropped quickly, but after some cycles,
the current increased slowly. This effect was also observed to tyramine
[4-(2-aminoethyl)phenol], a similar monomer to HPA, seems to
indicate that the electrode is not passivated, because lms obtained
in acid aqueous medium allows to obtain thicker lms with improved
conductivity properties [19].
To electrodes modied with polymeric lm in perchloric acid
solution, oxidation/reduction waves were observed at +0.63 V / +0.30 V
for poly(4-HPA) (Fig. 1b). The anodic and cathodic branches of the CV
were integrated between the appropriated potentials furnishing,
respectively, the anodic Qa, and cathodic, Qc, charge spent in the
electrode process of the poly(4-HPA) lm. A Qa/Qc ratio close to one was
obtained supporting the lm electrochemistry behaves reversible, no
uncompensated process being involved in the electrode process.
3.2. Immobilization and detection of oligonucleotides on graphite
modied with poly(4-HPA)
Fig. 1. (a) Cyclic voltammograms for graphite electrode after successive potential scans,
100 scans, in 0.50 mol L 1 HClO4 + 2.5 10 3 mol L 1 4-HPA solution. (- - -) non-modied
and () modied with poly(4-HPA), 100 cycles, in 0.50 mol L 1 HClO4. 50 mV s 1 (b) The
arrows indicate the behavior of the current with consecutive potential scan.
Oligonucleotides immobilization at solid supports presents applications in detection of disease-causing and food-contaminating
organisms to the forensic and environmental research, clinical, as
well as others [20].
Homooligomers and heterooligomers of four DNA nucleobases
present a signicant electrochemical response. The immobilization of
a 16-mer DNA sequences on graphite electrode without lm and
modied with poly(4-HPA) acid is shown in Figs. 2 and 3.
Anodic peaks of purine oligonucleotides were observed at
potentials almost identical to those obtained at an oxidation of
mononucleotides, adenosine monophosphate and guanosine monophosphate, at modied graphite electrode with poly(4-HPA) [18]. The
presented data conrm again electroactivity of DNA nucleobases at
modied graphite electrode.
After the hybridization with the complementary target, we
observed a decrease of both guanosine and adenosine current peaks,
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Fig. 3. Differential pulse voltammograms of graphite electrode modied with poly(4HPA) prepared in pH 0.5 (baseline-corrected), 100 scans, containing poly(GA) (a) before
hybridization and after 20 min incubation with non-complementary target: poly(GA)
(b), or complementary target: poly(CT) (c). Electrolyte: 0.1 mol L 1 phosphate buffer, pH
7.4. Modulation amplitude: 0.05 mV. Pulse interval: 0.2 s; 5 mV s 1.
Fig. 4. Agarose gel electrophoresis to PCR-amplied DNA, DENV-1 gene. M, DNA marker,
100 pb; lane 1, 3 L of the PCR-amplied products from Aedes aegypti.
trations of the complementary target ssDNA and the linear dependence after hybridization with the complementary target.
From Fig. 5a, it can be seen that the oxidation potential of ethidium
bromide is about +0.63 V. We also observed a different afnity for
ethidium bromide by dsDNA when compared with the ssDNA. This
increase in the current values after incubation with the complementary target can be attributed to hybridization reaction, or be it, duplex
formation. This result indicates that it is possible to detect the
complementary target of the DENV-1. The Fig. 5b shows a linear range
from 12 to 42 nmol L 1 and a detection limit of 7.12 nmol L 1.
This approach may be used to detect each one of the others three
types of dengue sorotypes, or be it, DENV-2, DENV-3 and DENV-4 by
replacement of DNA probe on the modied graphite electrode with
poly(4-HPA).
3.4. AFM analysis
The AFM results after the immobilization and hybridization of the
probe and/or target on the modied electrode surface have strong
implications in the development of DNA electrochemical biosensors,
because they can show important morphological alterations on the
surface, in agreement with the electrochemical responses [24]. Experiments were carried out aiming at comparing the images of electrodes
before or after hybridization with the biomolecules in study (Fig. 6ae).
Topographical images of the graphite electrode modied by lm
with or without biomolecules show that the morphology is made up
of globular aggregates, randomly distributed on the graphite surface,
except to poly(4-HPA)oligo probe where the surface is more
homogeneous.
Spherical aggregates were observed, in the literature, by topographical images of the modied electrodes containing poly(G) or poly
(T) [24]. Analysis of the graphite surface without polymeric lm [25]
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Fig. 6. AFM topographical images of modied graphite electrode with poly(4-HPA): (a) without biomolecules; after immobilization and hybridization with biomolecules: (b) poly
(GA), before hybridization; (c) poly(GA): poly(CT), after hybridization; (d) DENV-1 ssDNA, before hybridization; (e) DENV-1 dsDNA, after hybridization.
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Fig. 7. Images and graphics of section analysis to graphite electrodes modied with poly(4-HPA). (a, b) without biomolecules or after immobilization and hybridization with
biomolecules: (c, d) poly(GA), before hybridization; (e, f) poly(GA): poly(CT), after hybridization; (g, h) DENV-1 ssDNA, before hybridization; (i, j) DENV-1 dsDNA, after hybridization.
Acknowledgements
The authors are grateful for the nancial support from Conselho
Nacional de Desenvolvimento Cientco e Tecnolgico (CNPq) and
Fundao de Amparo Pesquisa do Estado de Minas Gerais
(FAPEMIG). Also, we would like to thank teacher Ablio Borghi for
the review of the English manuscript.
References
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It was possible to modify the electrode surface with 4hydroxyphenylacetic acid by means of electropolymerization. Poly
(4-hydroxyphenylacetic acid) produced is an efcient matrix for
oligonucleotides and DNA immobilization. Oligonucleotides give a
pronounced electrochemical response on electrodes modied with
this polymer.
Hybridization experiments carried out in solution show that the
recognition process of the hybridization with the complementary
target of oligonucleotidesDENV-1 can be followed by differential pulse
voltammetry. Additionally, the interaction between these DNA
molecules and a dsDNA intercalator, ethidium bromide, can be
observed. Based on the response of the intercalator, the complementary DNA sequence gave a decrease in the current signal and the
results are in agreement with the literature.
AFM images showed that the single stranded of oligonucleotides or
DENV-1 had roughness values lower than the double stranded of these
biomolecules, once that after the introduction of probe (oligonucleotide
or DNA) the surfaces presents more homogenous aspects (minor r.m.s
values) in relation to the modied electrode after hybridization.
The AFM results clearly showed its importance on the characterization of the modied graphite electrodes, being possible to visualize
the differences between the electrodes containing the probe and after
the addition of the complementary target.
The combination of poly(4-HPA) with biomaterials like oligonucleotides and DNA brings new opportunities for enhanced detection
methods for biosensor development.
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