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Lecture 2: Part II
Lipid Properties
The long chain is insoluble in water but the carbonyl group is very
hydrophilic.
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Fats and oils are esters formed by condensation of fatty acids with glycerols
Phosphoglycerides are molecules where phosphoric acid replaces a fatty acid esterified to
one end on the glycerols.
Phosphoglycerides also consists of hydrophilic and hydrophobic portions.
Phospholipids
A flat, double-molecular layer structure may be formed
across a small hole in a sheet submerged in lipid (or
phospholipid) solution.
Phospholipids are fat derivatives in which one fatty acid has been
replaced by a phosphate group and one of several nitrogencontaining molecules.
Example: Phosphatidyl ethanolamine (also known as cephalin)
Representation of lipids
involved in the formation of
biological membranes.
The head groups are hydrophilic
and prefer contact with water.
Hydrophobic tails face each other.
Biological Membranes
The hydrophobically
connected bilayers form
the basic structure of
biological membranes.
Biological plasma
membranes typically
contain appreciable
concentrations of
phospholipids and other
lipids.
http://kvhs.nbed.nb.ca/gallant/biology/cell_membrane.jpg
Lipid Membranes
Lipid membranes have high passive electrical resistance and capacitance.
Hence, they are impermeable to highly charged species.
The membrane, thus, allows the cell to contain a reservoir of charged nutrients and metabolic
intermediates.
The membrane determines which material enters, is confined and leaves the catalytic
reaction network housed in the cell.
The membranes act as a barrier.
The bi-layer is semi-permeable.
Toxic materials tend to be hydrophilic,
Repelled by the hydrophobic internal layer.
The selection of ion permeabilities can be modified by the addition of various substances
Antibiotics and other cation-complexing molecules can increase passive ion transport
Vitamins
Substance required in trace amounts for normal cell function.
Essential vitamins
The cell cannot survive if they are absent in the external media.
Vitamins A, C, D, E, K, and the B vitamins (thiamine, riboflavin, niacin, pantothenic acid,
biotin, vitamin B6, vitamin B12, and folate)
They all can be obtained from food, and vitamin D and vitamin K can be synthesised by
the body
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Hormones
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Amino Acids
The monomeric building block of polypeptides and proteins are
the -amino acids.
H
H2N
COOH
H
H2N
COOH
L - form
HOOC
N2H
D - form
The acid (-COOH) and the base (-NH2) groups of the amino acids
can ionise in aqueous solution.
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OH
+ H
-H2O
OH
RH
1
H
C
C
H
O
O
R1
OH
C
N
C
R2
C
R2
Every amino acid links with the next via peptide bond.
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(b)
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Simple proteins:
only amino acids are present
Conjugated proteins:
have other organic or inorganic components
E.g. Haemoglobin, the oxygen-carrying molecule in the blood, has four
heme groups (organometallic complex containing iron).
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Proteins
Most abundant molecules within the cell,
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Protein Structure
Primary
2.
Secondary
3.
Tertiary
4.
Quaternary
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Secondary Structure
Helices
Sheets
If the H-bond occur between the C=O group of one residue and the NH
group of its neighbour, the protein chain is then coiled (-helix).
E.g. skin, ligaments, eye cornea and other parts of the body.
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Tertiary Structure
Oil-drop model
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NH C S H
+
C=O
H S C NH
-2H
NH C S S C NH
C=O
Disulfide bond
Most of the forces holding the geometrical structure of proteins are weak and
allow the protein to flex.
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Enzymes
Only definite substrates are converted by a particular enzyme.
End product
+
Substrate
Enzyme-substrate
complex
Enzyme: active site on surface
Free enzyme
Only substrates with the proper complimentary shape can bind to the enzyme.
Denaturation:
Structural change of protein when exposed to conditions sufficiently different from its
biological environment.
cannot perform its normal function.
Relatively small changes in temperature (or pH) may cause denaturation without
severing the covalent bond.
When the denatured protein is slowly cooled (or pH retained) to its natural value, a
reverse process (renaturation), with restoration of function, often occur.
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Quaternary Structure
Proteins may exist in more than one chain
(haemoglobin).
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