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Niyanthesh Reddy
Dr. D Alessio
Class: DA8
Date: 10/31/2015
Abstract
Tube
Relative
pH
Solution
E
0.2 M
HCl
0.1 M
Na2CO3
Distilled
water
Solution D
High conc.
enzyme
Total
Volume
1
contro
l
---
3 mL
---
---
2 mL
---
5 mL
---
---
100 L
5 mL
Acidic
3 mL
1.9
mL
Neutral
3 mL
---
---
1.9 mL
100 L
5 mL
Basic
3 mL
---
1.9 mL
---
100 L
5 mL
Add Solution B, 6.5 mL, (pNPP-para nitro phenol phosphate) and 6.5 mL distilled
water to form Solution E. Label 4 cuvettes and prepare them as to the proportions of
each solution in Table 1. Place a broad pH paper on a clean, dry surface and after
mixing, remove a drop of each solution and drop on the pH paper. For each cuvette,
record the pH of the solution (only cuvettes 2-4) in Table 2. Begin procedures 1-4
with cuvette 2, 3 and 4 and add Solution D to it (right before doing the reading).
Mix carefully, using parafilm paper to invert (cuvette) and place the cuvettes in the
spectrophotometer. Record the absorbance reading at Time 0, and henceforth every
30 seconds for five minutes. Each value is to be recorded on Data Table 2. Repeat
procedures for cuvettes 3 and 4 (steps 2-7)
Notes: Since Tube 1 is the control, the spectrophotometer should be set to blank at
405 nm. Do not add solution D to any cuvette until ready for insertion into the
spectrophotometer.
Pre-Procedure for Parts Two and Three (Wilson, Properties of Enzymes)
Mix 15 mL of Solution A and 15 mL of Solution B in a 50 mL beaker and label it
Solution F. This solution will be used when measuring the effects of concentration
and temperature on enzymatic activity in reactions (ALP enzyme). Label eight
cuvettes 1a- 4a, 1b- 4b.
In this pre-procedure, the first major step is to prepare cuvette 1 and to set the
spectrophotometer to 405 nm. Re-blank the spectrophometer by adding enzyme to
cuvette 1 and label it cuvette 1a. Prepare cuvettes 1-4a using Table 3.
Use a micropipette and add 3 mL of Solution F to each of the eight cuvettes (1a-4a,
1b-4b). Prepare the b cuvettes for part 3 (Temperature) of the experiment by
following the mixing instructions in Table 4 and by placing 1b in the refrigerator (4
C), 2b at room temperature (23 C), 3b in a water bath (32 C) and 4b in a water bath
(60 C).
Table 3- Mixing table for Cuvettes 1-4a: The Effect of Concentration on
Enzymatic Rate
Tube
Relative
Enzyme Conc.
Sol C
Low ALP
(Enzyme) conc.
Sol F (comprised of
Sol A/B
Buffer/substrate
stock solution)
3 mL
---
Sol D
High ALP
(Enzyme)
conc.
---
1 blank (no
enzyme)
1a blank plus
enzyme
2a
3a
Lowest
3 mL
100 L
---
Medium
Higher medium
3 mL
3 mL
400 L
---
--200 L
4a
Highest
3 mL
500 L
---
Tube
Temperature (C)
1b
2b
3b
4b
4
23
32
60
Sol F
(Buffer/substrate stock
solution)
3 mL
3 mL
3 mL
3 mL
Sol C
Low ALP (Enzyme)
conc.
100 L
100 L
100 L
100 L
parafilm, invert to mix, and place it into a spectrophotometer. Read the absorbance
level at 0 seconds, and read the absorbance every 30 seconds for 5 minutes.
Note: Refer to Tables 3 and 4 for detailed mixing instructions
pH 2
0
30
60
90
120
150
180
210
240
270
300
pH 7
0.038
0.036
0.035
0.034
0.033
0.033
0.033
0.033
0.032
0.032
0.032
pH 10
0.076
0.083
0.084
0.089
0.094
0.098
0.101
0.105
0.112
0.115
0.118
0.07
0.072
0.075
0.076
0.077
0.08
0.082
0.084
0.086
0.088
0.09
pH 2
f(x) = 0x + 0.08
Linear (pH 2)
ph 7
Linear (ph 7)
pH 10
0.04
0.02
0
0
f(x) = - 0x + 0.04
50 100 150 200 250 300 350
Time (sec)
Rate of Reaction
2
-0.00002
0.0001
10
0.00007
Figure 2: Effect of Different pH levels on the Rate of Enzyme Reaction over Time
0
0
0
0
Rate of Enzyme Reaction 0
0
0
0
10
0
pH level
In table 2 and figure 2, the rate of reaction was most for pH 7, as indiciated by the
rate of the reaction being y=0.0001. The rate of the reaction was then the greatest
for pH 10, at y=0.00007x, and last for pH 2, at a decreasing rate of y=-0.00002x
Results- Part 2
Effect of Concentration on Enzyme Activity
Table 3: Effect of enzyme concentration on the Activity of Enzyme ALP
Time (s)
1a (low)
2a (med)
3a (med-high)
4a (high)
0.117
0.485
0.263
0.528
30
0.126
0.512
0.317
0.645
60
0.132
0.536
0.369
0.766
90
0.140
0.558
0.423
0.878
120
0.148
0.584
0.475
0.988
150
0.154
0.610
0.549
1.098
180
0.161
0.634
0.578
1.209
210
0.168
0.660
0.630
1.314
240
0.175
0.681
0.682
1.428
270
0.182
0.704
0.729
1.525
300
0.189
0.730
0.778
1.629
1a (low)
Linear (1a (low))
1.200
2a (med)
1.000
Absorbnace Levels
0.800
0.600
f(x) = 0x + 0.27
f(x) = 0x + 0.49
4a (high)
Linear (4a (high))
0.400
0.200
0.000
0
f(x) = 0x + 0.12
50
100
150
200
250
300
350
Time (sec)
Rate of Reaction
Low
0.0002
Med
0.0008
med high
0.0017
High
0.0037
Figure 4: Effect of Different Enzyme Concentration on the Rate of Enzyme Reaction over Time
0
0
0
0
Rate of Reaction 0
0
0
0
0
1a (low)
2a (med)
3a (med-high)
4a (high)
Enzyme Concentration
In Table 3 and Figure 3, it is indicated that the enzyme concentration had the
greatest effect on the Activity of Enzyme ALP indicated by cuvette 4a (high
concentration). The absorbance level for 4a rose from 0.528 to 1.629. The
absorbance level for 3a (med-high) increased from 0.263 to 0.778. The absorbance
level for 2a (medium concentration) rose from 0.475 to 0.730. Last, 1a (low
concentration), the absorbance level rose from 0.117 to 0.189. The greatest linear
trend was for the high enzyme concentration (4a).
Results-Part Three
Effect of Temperature on Enzymatic Activity in Reactions
Table 5: Effect of temperature on the rate of an enzyme controlled reaction
4oC
Time (s)
0
30
60
90
120
150
180
210
240
270
300
20oC
0.053
0.057
0.061
0.062
0.066
0.069
0.072
0.075
0.078
0.082
0.084
32oC
0.077
0.081
0.085
0.092
0.097
0.102
0.107
0.111
0.116
0.121
0.126
60oC
0.084
0.091
0.101
0.11
0.12
0.128
0.137
0.144
0.151
0.158
0.166
0.122
0.125
0.13
0.134
0.137
0.14
0.143
0.146
0.149
0.151
0.154
Linear (4 C)
20 C
0.1
Linear (20 C)
Absorbance Levels
32 C
0.08 f(x) = 0x + 0.05
Linear (32 C)
60 C
Linear (60 C)
0.06
0.04
0.02
0
0
50
100
150
200
250
300
350
Time (sec)
Rate of
Reaction
0.0001
20
0.0002
32
0.0003
60
0.0001
0
Rate of Reaction
0
20
32
60
Temperature (C)
In table 5 and Figure 5, the effect of temperature on the rate of the enzyme
controlled reaction had a big impact. The absorbance level rose from 0.053 to 0.084
for 4oC temperature. The absorbance level rose from 0.077 to 0.126 for 20 oC. At 32
o
C, the highest increase in absorbance level occurred, rising from 0.084 to 0.166.
Last, at 60 oC, the absorbance level rose from 0.122 to 0.154.
In Figure 5, the effect of temperature on enzyme activity was plugged in and for 4
o
C, y=0.0001x +0.0563. For 20oC, y=0.0002x+0.0765 was the linear trend line. For
32 oC, the trend line linear equation was 0.0003x +0.0849. Last, the trend line at 60
o
C was 0.0001x+0.1232.
In Table 6, the rate of the reaction was calculated for each Temperature, based off of
y=mx, These values were placed in a tabular form, in Graph 6. The greatest rate of
reaction, as indicated in the column graph, was at 32 oC, where y=0.0001x. The
second highest rate was at 20 oC, where the rate of reaction was y=0.0002x. The
(Reece, Campbell
Biology)
For
concentration levels,
as the concentration
increases, the rate
of the reaction
increases until all of the substrate molecules have binded to their complementary
active site on the enzyme. As indicated in Tables 3 and 4, four cuvettes with
different concentrations of ALP enzyme was tested for. The ones containing the
most enzymes had the highest reaction rate as more enzymes were able to react
with the substrates, and the ones containing the least concentration of enzymes
had the least reaction rate. This was indicated by Tables 3, through absorbance
levels in the spectrophotometer, and Table 4, by measuring the rate of reaction.
Therefore, the greater the concentration of enzyme, the greater the reaction rate as
more substrates can bond to the enzymes. This increase occurs until the active sites
of all the enzymes are full.
In pH and Temperature, buffers were used as major differences occurred. As
demonstrated in the theoretical graph (Conclusion) , the bell-curve is so drastic
between pH levels 2-10 and between temperatures 30 to 75 degrees Celsius.
Buffers were therefore used to equalize the point of interaction between enzymes
and the corresponding factors (pH and temperature).
In conclusion, pH, temperature, and concentration have a great effect on the
function and shape of enzymes. Temperature, pH and concentration, if too high or
too low can damage the internal and external structures of enzymes, thereby
causing reactions to slow or not even work, as demonstrated by the enzymesubstrate complex. Therefore, to obtain statistically more correct results, further
experimentation must be done.
Work Cited
Wilson, C., D'Alessio, N., Lavin, E., & Keith, E. (n.d.). Properties of Enzymes. Nova
Southeastern University Bio 1500, Florida.
Reece, J. (2014). Campbell biology (Tenth ed.). Boston: Benjamin Cummings :.
Michael, F. (2015). Lab #4: Enzymes. Retrieved November 2, 2015, from
http://www.indiana.edu/~nimsmsf/P215/p215notes/LabManual/Lab4.pdf
Mot, R., Schrijver, A., Schoofs, G., & Parret, A. (2003). The thiocarbamate-inducible
Rhodococcus enzyme ThcF as a member of the family of / hydrolases with
haloperoxidative side activity. FEMS Microbiology Letters,197-203.
Eed, John (2013) "Factors Affecting Enzyme Activity," ESSAI: Vol. 10, Article 19.