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Introduction
Amyloid fibril formation is a focal area in current biomedical
research. Understanding the mechanisms of the conversion from
the native protein state to the amyloidal states represents
a fundamental step to improve the purification, storage and
delivery of protein-based drugs.1 Moreover, investigating the
origin of high impact neurodegenerative diseases like Alzheimers, Parkinsons and type-II diabetes can not be separated from
an accurate description of the inter- and intra-molecular interactions involved in the formation of such amyloid aggregates.2,3
In fact, amyloid fibrils are recognized to be connected with the
onset of such diseases, although their role is still a matter of
debate. Fibrils show common structural properties with a specific
arrangement of b-sheets commonly known as a cross b structure
revealing a well defined X-ray fibre diffraction pattern, as well as
a typical birefringence activity and/or fluorescence emission
when bound to specific dyes.4 Moreover, under suitable conditions formation of such assemblies may also be induced in vitro
for a large number of proteins.
As a consequence, the capability for the native state to convert
into non-native aggregates is considered a general pathway in the
free energy landscape of a protein.5,6
Formation of the mature amyloid fibrils is determined by
a complex and diversified interconnection of a high number of
interactions appearing with different time and length scales. It is
commonly accepted that a partial destabilization of the native
state is a conditio sine qua non for the actual growth of amyloid
a
Department of Medicinal Chemistry, Faculty of Pharmaceutical Sciences,
University of Copenhagen, Universitetsparken 2, DK-2100 Copenhagen ,
Denmark
b
Department of Pharmaceutics and Analytical Chemistry, Faculty of
Pharmaceutical Sciences, University of Copenhagen, Universitetsparken
2, DK-2100 Copenhagen , Denmark
Present address: Sector of Biological and Soft Systems, Dept. of
Physics, Cavendish Laboratory, University of Cambridge, JJ Thomson
Avenue, Cambridge CB3 0HE, UK. E-mail: vf234@cam.ac.uk, Tel:
+44 (0) 1223 337290. Robinson College, Grange Road, Cambridge
CB3 9AN, UK.
added to each well prior to incubating the plate and the emission
intensity at 480 nm was recorded upon excitation at 450 nm. The
emission signal was detected from the bottom of the plate every
400 s by an optical fibre system (bottom-bottom configuration).
Fibril formation was induced in an eppendorf tube on a 1 mlsample of bovine insulin (10 mg/ml) in 20% acetic acid, NaCl 0.5
M (pH 1.8) and incubated 24 h at 45 C. After this, samples were
equilibrated to room temperature. Fibril-containing aliquots
were then diluted (10% v/v) in five eppendorf tubes containing
20% acetic acid. Sonication was performed on four out of five
samples using a duty cycle of 50%, output control of 1 in a pulsed
regime. The tip was carefully cleaned by multiple flushing with
ethanol and Milli-Q water before each immersion in the samples.
The extent of fibril break-up was varied by using different
numbers of consecutive pulses (1, 4, 6 and 12 pulses) for different
solutions. Importantly, in this regime of soft sonication, no
temperature increase was detected in the samples. ThT fluorescence (ThT 20 mM) was measured for 24 h at 30 C on 200 mlaliquots of the sonicated and unsonicated samples using the
already mentioned procedure for fluorescence detection.
Aliquots of the same samples at different sonication treatments
were also used for seeding experiments by adding the fibrils to
a fresh solution of bovine insulin 1 mg/ml in insulin in 20% acetic
acid, NaCl 0.5 M (pH 1.8) to a final concentration of 1% wfibril/
wnative. Afterward, such seeded solutions were incubated at 45 C
with 20 mM ThT and the temporal evolution of the ThT fluorescence was detected as described before. Finally, AFM analysis
was also carried out on the aliquots of sonicated samples as
described in the previous section. The whole procedure was
repeated 3 times on independent samples to check the reproducibility of all of the results.
This journal is The Royal Society of Chemistry 2010
Fig. 1 AFM amplitude scans after fibril formation from 10 mg/ml bovine insulin in 20% acetic acid, 0.5 NaCl, after 24 h of incubation at 45 C. (a)
10mm scan size and relative zooms at (b) 5 mm and (c) 1.6 mm. (d) 5 mm scan size of another area of the mica surface and (e) relative zoom at 1.25 mm.
Fig. 2 AFM amplitude scans after fibril formation of 1 mg/ml bovine insulin in 20% acetic acid, 0.5 NaCl, after 24 h of incubation at 45 C. (a) 15mm
scan size and relative zooms at (b) 5 mm and (c)1.25 mm. (d) 3 mm scan size of another area of the mica surface and (e) relative zoom at 1.25 mm. White
arrows indicate clustering effect (Figure 2c) and branching (Figure 2e).
Fig. 5 ThT fluorescence final value (FFV) for fibrils formed at 10 mg/ml
of bovine insulin in 20% acetic acid 0.5 M NaCl at 45 C, diluted 1 : 10 v/v
and treated with different sonication pulses. Error bars represent absolute deviations observed on four replicates. Dashed line is a visual guide.
a value 2.5 times higher for 5 mg/ml (data not shown). This
indirectly indicates that at low concentration fibril clustering and
the formation of complex fibril structures are greatly suppressed
compared to fibrils formed at high concentration. These findings
corroborate the AFM data (Fig. 2).
Our data (Fig. 4 and Fig. 5) suggest that sonication treatments
are able to disassemble the superstructures originally formed at
10 mg/ml, thereby making available a larger number of ThT
binding sites (Fig. 5), reaching a maximum number of available
sites for pulses >4. We conclude that fibril clustering, bundles
formation (dotted white circles in Fig. 1a) and the formation of
even larger superstructures are responsible for the saturation
effect observed in Fig. 3, in accordance with independent
reports.33
Finally, the catalytic effect on fibrillation by differently sonicated fibrils was studied. In Fig. 6a the fibrillation kinetics of
bovine insulin 1 mg/ml at 45 C with the seeds from differently
sonicated samples are shown and compared to the unseeded
kinetics. Clearly, the main effect of seeding a fresh solution is to
shorten the lag time51 only slightly varying the growth rate
(Fig. 6a). Interestingly, the seeding effect on fresh solutions is
dependent on the sonication treatment, i.e. on the amount of
available fibril surfaces. Fig. 6b shows the inverse of the time
necessary to reach the 50% of the kinetics (1/t50%) and this value
is highest when the seeds are significantly sonicated (>4, Fig. 6b).
The data in Fig. 6a and 6b suggest that when the fibril surfaces
are more accessible (as previously verified by the increase of the
ThT signal, Fig. 5) their catalytic effect is significantly enhanced.
Basing on the idea that ThT-fluorescence levels reflect the
available fibril surface area,41,4547 our results thus provide
evidence for a direct involvement of available fibril surface area
in secondary nucleation, i.e. heterogeneous nucleation.12
It is worth to note that the overall rate of fibril formation (1/
t50%) as a function of the insulin concentration shows a steep
linear increase up to 5mg/ml, but then remains relatively constant
at increasingly higher concentrations.32
The latter tendency has previously been ascribed to the nucleus
becoming stable in solution at concentration higher than
5mg/ml29,52 with an underlying assumption mainly based on
Soft Matter, 2010, 6, 44134419 | 4417
Conclusions
Acknowledgements
We wish to thank Sven Frokjaer, Minna Groenning and
Maurizio Leone for useful discussions and financial support.
Fabio Librizzi is acknowledged for seeding ideas behind this
work. We thank Tue Hassenkam and the Nano-Science Center,
University of Copenhagen for the availability of the atomic force
microscope. Vito Foder
a was partly supported by a Lifelong
Learning Program (LLP) - Erasmus Placement.
References
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