FARM DETAILS

Jhon and Jhon Farm (Sir Chito

Aniban)
Date Extracted: August 19, 2013

ALFONSO, CAVITE (BASE 2)

Sample # ANIMAL ID Breed Gender ESR PRLR LIF RBP4 MYOG PSS

JJ1 0122 W S AB AB BB AB AA -
JJ2 0034 CW S AA BB AA AA AA -
JJ3 0028 CW B AB BB AA AB AA -
JJ4 0103 D S AA AB AB AA AA -
JJ5 770928 PT S AA AB BB AB AA -
JJ6 0715 D S AA AB AA AB AA -
JJ7 766150 PT B AA AB AB AB AA -
JJ8 0120 CW S AA BB AA AA AA -
JJ9 0325 CW S AB BB AA AA AA -
JJ10 0689 D S AA AB BB AB AA -
JJ11 0085 CW S AA BB AA AA AA -
JJ12 0617 CW B AA BB AA AB AA -
JJ13 0036 CW S AA BB AA AA AA -
JJ14 771229 PT S AA AB AB AB AA +
JJ15 0173 D S AA AB AB AB AA -
JJ16 0092 CW B AA BB AB AB AA -
JJ17 7467447 PT B AA BB AB AA AA -
JJ18 0551 CW B AA BB AA AB AA +
JJ19 766151 PT B AA BB BB AB AA -
JJ20 1765155 PT S AA AB BB AB AA +
JJ21 767443 PT B AA BB AB AA -
JJ22 0415 CW S AA BB BB AA AA -
JJ23 0410 CW B AA BB BB AA AA -
JJ24 0094 CW S AA BB BB AA AA -
JJ25 560510 PT S AA AA BB AB AA -
JJ26 40-6 CW S AA BB AA AA AA -
JJ27 0118 W B AB AB BB AB AA -
JJ28 0810 CW S AA AA AB AA -
JJ29 0106 D S AA AA BB AA AA -
JJ30 0060 CW S AA BB AA AA AA -
JJ31 0104 D S AA AB AB AA AA -
JJ32 0716 D S AA AA AB AB AA -
JJ33 766154 PT S AA BB BB AB AA +
JJ34 0120 W S AB AB AB AA AA -
JJ35 766153 PT S AA - BB AB AA -
JJ36 166211 PT S AA - AB AB AA -
JJ37 766157 PT S AA BB BB AB AA +
JJ38 7485 W S AA BB AA AA -
JJ39 8846 L S AA AB AB AA -

JJ40 0470 CW S AA BB AB AA -

JJ41 0286 CW S AA AA AB AA -

JJ42 7490 W S AA BB BB AA -

JJ43 5601 W B AB BB BB AA -

JJ44 0052 CW S AB BB BB AA -

JJ45 0075 CW S AA AB BB AA -

JJ46 6770 W S AB BB BB AA -

JJ47 8285 L S AA AA BB AA +

JJ48 0471 CW S AA AB BB AA -

JJ49 8739 W S AA BB AA AA -
Sample # ANIMAL ID Breed Gender ESR PRLR LIF RBP4 MYOG PSS

JJ50 0262 CW S AA BB AB AA -

JJ51 8301 W S AB AB AB AA AA -
JJ52 12665 W S AB BB BB AA AA +
JJ53 4464 CW S AB AA AB AA -
JJ54 8334 D S AB BB BB AA +

JJ55 8146 CW S AA BB AA AA -

JJ56 0064 CW S AB BB AB AA -

JJ57 7440 W S AB AB AA AA -

JJ58 7951 W S AB BB AA AA +

JJ59 0376 W S AA AA AB AA AA -
JJ60 12418 L S AB AB AB AA AA -
JJ61 0480 CW S AA BB AA AA AA -
JJ62 3048 W S AA BB AB AB AA -
JJ63 8862 W S AB AA BB AA AA -
JJ64 0073 CW S AA BB AA AA AA -
JJ65 7108 D S AA AA AB AB AA -
JJ66 8026 W S AB AB BB AA AA -
JJ67 11918 L S AA AB AB AB AA +
JJ68 8321 W S AB BB AB AA AA -
JJ69 6191 W S AB BB AA AA AA -
JJ70 0462 CW S AB BB AA -
JJ71 8570 W S AB BB BB AA AA -
JJ72 0034 CW S AB BB AA AB AA -
JJ73 0460 CW S AA BB AA AA AA -
JJ74 10742 L S AB BB AB AB AA +
JJ75 6722 W S AB BB AB AA AA -
JJ76 11976 D S AA AB AB AB AA -
JJ77 0455 CW S AA BB AA AB AA -
JJ78 8861 W S AB AB BB AA AA -
JJ79 8374 L B AA AA AB AB AA +
JJ80 11682 W S AB BB BB AA AA -
JJ81 7245 D S AA AB BB AA AA -
JJ82 0484 CW S AA BB AA AB AA -
JJ83 11922 L S AB AB AB AB AA +
JJ84 8146 D S AA AB AB AB AA -
JJ85 10884 L B AA BB AA AB AA +
JJ86 8478 W S AB AB BB AA -

JJ87 0057 CW S AB BB BB AA -

JJ88 8239 L S AB BB BB AA -

JJ89 6389 W S AB AB AB AB AA -
JJ90 0345 W B AA BB BB AA AA -
JJ91 6796 W S AA BB BB AA AA -
JJ92 0098 CW S AA BB AA AB AA -
JJ93 7285 W S AB BB BB AA AA -
JJ94 0093 CW S AB BB AA AA AA -
JJ95 0196 W S AB BB AA -

JJ96 6859 W S AB AB AB AA AA -
JJ97 7840 W S AB BB AB AA -

JJ98 0465 CW S AB BB AA -

JJ99 0033 CW S AA AB AA -

JJ100 0115 CW S AB BB AA -

JJ101 AB AA
JJ102 AB BB AA AA
JJ103 AB AA
JJ104 AB BB AA AA
JJ105 AB AA
Sample # ANIMAL ID Breed Gender ESR PRLR LIF RBP4 MYOG PSS

JJ106 AB AA
JJ107 AB AA
JJ108 AB AA
JJ109 AB AA
JJ110 AA BB AA AA
JJ111 AB AA
JJ112 AA BB AA AA
JJ113 AB BB BB AA
JJ114 AB BB AA AA
JJ115 AB AB AB AA
JJ116 AB BB AA AA
JJ117 AB BB AA AA
JJ118 AB BB AA AA
JJ119 AB BB AA AA
JJ120 AB BB AA
JJ121 AB AA AB AA
JJ122 AB BB AA AA
JJ123 AB BB AA AA
JJ124 AB BB AA AA
JJ125 AB BB AA AA
JJ126 AB AB BB AA
JJ127 AB AB BB AA
JJ128 AB BB BB AA
JJ129 AB BB AB AA
JJ130 AB AB BB AA
JJ131 AA AB BB AA
JJ132 AA AA BB AA
JJ133 AA BB BB AA
JJ134 AA AB AB AA
JJ135 AA BB AA AA
JJ136 AA AB BB AA
JJ137 AB AB BB AA
JJ138 AB BB AA AA
JJ139 AB AB BB AA
JJ140 AB BB AB AA
JJ141 AA BB AA AA
JJ142 AB BB AA AA
JJ143 AB BB AA AA
JJ144 AA AB BB AA
JJ145 AB BB BB AA
JJ146 AA BB AA AA
JJ147 AB AA AB AA
JJ148 AB BB AA AA
JJ149 AB BB AA AA
JJ150 AB BB AA AA
JJ151 AB BB AA
JJ152 AB BB AA
JJ153 AB BB AA
JJ154 AB BB AA
JJ155 AB AB AA
JJ156 AB BB AA
JJ157 AB AA AA
JJ158 AB AB AA
JJ159 AB BB AA
JJ160 AB BB AA
JJ161 AB BB AA
Sample # ANIMAL ID Breed Gender ESR PRLR LIF RBP4 MYOG PSS

JJ162 AB BB AA
JJ163 AB BB AA
JJ164 AB AB AA AA
JJ165 AB AA AB AA
JJ166 AB AA AB AA
JJ167 AB AB AB AA
JJ168 AB BB BB AA
JJ169 AB BB AA
JJ170 AB AB BB AA
JJ171 AB AA
JJ172 AB AB AB AA
JJ173 AB AB AB AA
JJ174 AB AA AB AA
JJ175 AB AB AB AA
JJ176 AB BB BB AA
JJ177 AB BB AA AA
JJ178 AB AB AB AA
JJ179 AB BB BB AA
JJ180 AB AB AA AA
JJ181 AB BB BB AA
JJ182 AB AA AB AA
JJ183 AB AB AA AA
JJ184 AB AB AA AA
JJ185 AB BB AB AA
JJ186 AB AB BB AA
JJ187 AB AA BB AA
JJ188 AB AB AB AA
JJ189 AB AB AB AA
JJ190 AB BB AB AA
JJ191 AB AB AB AA
JJ192 AB BB BB AA
JJ193 AB BB BB AA
JJ194 AB AA AB AA
JJ195 AB AA BB AA
JJ196 AB BB AA
JJ197 AB BB AA AA
JJ198 AB BB AA AA
JJ199 AB BB BB AA
JJ200 AB BB AA AA
 Sample # ANIMAL ID Breed Gender ESR PRLR LIF RBP4 MYOG PSS

LEGENDS:

ALLELE ESR PRLR LIF RBP4 MYOG

AA 120bp 157 190+154+136 219+134

AB 120+65+55bp 127+35 190+170+154+136 353+219+134

BB 65+55 bp 127+35 190+170+136 353

REMARKS Count - ANIMAL ID Gender
Breed B S (empty)
CW 5 32
D 12
L 2 7
PT 4 8
W 3 27
(empty)
Total Result 14 86

Gene Allele Genotype

ESR 19.5 0
PRLR 22.56 10.31
LIF 51.37 32.88
RBP4 66.13 44.09
MYOG 100 100
PSS 86 86?

red low
orange ave
yellow above ave
green high
blue very high
REMARKS Count - ANIMAL ID Gender
REMARKS Count - ANIMAL ID Gender
REMARKS Count - ANIMAL ID Gender
 ESR

Genotype
Breed
Total Result AA AB BB
37 CHESTER WHITE 26 11 0
12 DUROC 11 1 0
9 LANDRACE 5 4 0
12 PIETRAIN 12 0 0
30 LARGE WHITE 7 23 0
Grand Total 61 39 0
100

Genotype Frequency
Breed
AA AB BB
CHESTER WHITE 26.00 11.00 0.00
DUROC 11.00 1.00 0.00
LANDRACE 5.00 4.00 0.00
PIETRAIN 12.00 0.00 0.00
LARGE WHITE 7.00 23.00 0.00
Grand Total 61.00 39.00 0.00

Allele Frequency
Breed Grand Total
A B
CHESTER WHITE 31.50 5.50 37.00
DUROC 11.50 0.50 12.00
LANDRACE 7.00 2.00 9.00
PIETRAIN 12.00 0.00 12.00
LARGE WHITE 18.50 11.50 30.00
Grand Total 80.50 19.50 100.00

Genotype
SOW
AA AB BB
CHESTER WHITE 0 22 10
DUROC 0 11 1
LANDRACE 0 3 4
PIETRAIN 0 8 0
LARGE WHITE 0 6 21
Grand Total 0 50 36

Genotype
BOAR
AA AB BB
CHESTER WHITE 4 1
DUROC
LANDRACE 2
PIETRAIN 4
LARGE WHITE 1 2
Grand Total 11 3

Boars Total Boars ESR PRLR

 Genotype
Breed
14 0 7.14

Sows Total Sows ESR PRLR

86 0 10.47

Breed Number of animals

CW 37
D 12
L 9
PT 12
W 30
(blank) 100
Grand Total 200

Count of ANIMAL ID
Column Labels
Row Labels B S (blank)
CW 5 32
D 12
L 2 7
PT 4 8
W 3 27
(blank)
Grand Total 14 86
 PRLR

Genotype
Grand Total Breed Grand Total
AA AB BB
37 CHESTER WHITE 2 3 31 36
12 DUROC 3 8 1 12
9 LANDRACE 2 4 3 9
12 PIETRAIN 1 4 5 10
30 LARGE WHITE 2 10 18 30
100 Grand Total 10 29 58 97

Genotype Frequency
Grand Total Breed Grand Total
AA AB BB
37.00 CHESTER WHITE 2.06 3.09 31.96 37.11
12.00 DUROC 3.09 8.25 1.03 12.37
9.00 LANDRACE 2.06 4.12 3.09 9.28
12.00 PIETRAIN 1.03 4.12 5.15 10.31
30.00 LARGE WHITE 2.06 10.31 18.56 30.93
100.00 Grand Total 10.31 29.90 59.79 100.00

Allele Frequency
Breed Grand Total
A B
CHESTER WHITE 3.61 33.51 37.11
DUROC 7.22 5.15 12.37
LANDRACE 4.12 5.15 9.28
PIETRAIN 3.09 7.22 10.31
LARGE WHITE 7.22 23.71 30.93
Grand Total 25.26 74.74 100.00

Genotype
Grand Total SOW Grand Total
AA AB BB
32 CHESTER WHITE 2 3 26 31
12 DUROC 3 8 1 12
7 LANDRACE 1 4 2 7
8 PIETRAIN 1 3 2 6
27 LARGE WHITE 2 9 16 27
86 Grand Total 9 27 47 83

Genotype
Grand Total BOAR Grand Total
AA AB BB
5 CHESTER WHITE 5 5
DUROC
2 LANDRACE 1 1 2
4 PIETRAIN 1 3 4
3 LARGE WHITE 1 2 3
14 Grand Total 1 2 11 14

LIF RBP4 MYOG PSS

 Genotype
Grand Total Breed Grand Total
28.57 21.43 100.00 78.57

LIF RBP4 MYOG PSS

23.26 44.19 100.00 87.21

Type Count of Sample #

B 14
S 86
(blank) 100
Grand Total 200

Grand Total
37
12
9
12
30

100
 LIF

Genotype
Breed Grand Total
AA AB BB
CHESTER WHITE 19 2 3 24 CHESTER WHITE
DUROC 1 7 3 11
LANDRACE 1 5 0 6
PIETRAIN 0 5 7 12
LARGE WHITE 1 8 11 20
Grand Total 22 27 24 73

Genotype Frequency
Breed Grand Total
AA AB BB
CHESTER WHITE 26.03 2.74 4.11 32.88 CHESTER WHITE
DUROC 1.37 9.59 4.11 15.07
LANDRACE 1.37 6.85 0.00 8.22
PIETRAIN 0.00 6.85 9.59 16.44
LARGE WHITE 1.37 10.96 15.07 27.40
Grand Total 30.14 36.99 32.88 100.00

Allele Frequency
Breed Grand Total
A B
CHESTER WHITE 27.40 5.48 32.88 CHESTER WHITE
DUROC 6.16 8.90 15.07
LANDRACE 4.79 3.42 8.22
PIETRAIN 3.42 13.01 16.44
LARGE WHITE 6.85 20.55 27.40
Grand Total 48.63 51.37 100.00

Genotype
SOW Grand Total
AA AB BB
CHESTER WHITE 16 1 2 19 CHESTER WHITE
DUROC 1 7 3 11
LANDRACE 4 4
PIETRAIN 2 6 8
LARGE WHITE 1 8 9 18
Grand Total 18 22 20 60

Genotype
BOAR Grand Total
AA AB BB
CHESTER WHITE 3 1 1 5 CHESTER WHITE
DUROC
LANDRACE 1 1 2
PIETRAIN 3 1 4
LARGE WHITE 2 2
Grand Total 4 5 4 13
 RBP4 PSS

Genotype Resistance
Breed Grand Total Breed
AA AB BB -
CHESTER WHITE 15 13 4 32 CHESTER WHITE 36
DUROC 4 7 1 12 DUROC 11
LANDRACE 1 6 2 9 LANDRACE 3
PIETRAIN 1 10 0 11 PIETRAIN 8
LARGE WHITE 20 5 4 29 LARGE WHITE 28
Grand Total 41 41 11 93 Grand Total 86

Genotype Frequency Genotype Frequency

Breed Grand Total Breed
AA AB BB
CHESTER WHITE 16.13 13.98 4.30 34.41 CHESTER WHITE
DUROC 4.30 7.53 1.08 12.90 DUROC
LANDRACE 1.08 6.45 2.15 9.68 LANDRACE
PIETRAIN 1.08 10.75 0.00 11.83 PIETRAIN
LARGE WHITE 21.51 5.38 4.30 31.18 LARGE WHITE
Grand Total 44.09 44.09 11.83 100.00 Grand Total

Allele Frequency Allele Frequency

Breed Grand Total Breed
A B -
CHESTER WHITE 23.12 11.29 34.41 CHESTER WHITE 36.00
DUROC 8.06 4.84 12.90 DUROC 11.00
LANDRACE 4.30 5.38 9.68 LANDRACE 3.00
PIETRAIN 6.45 5.38 11.83 PIETRAIN 8.00
LARGE WHITE 24.19 6.99 31.18 LARGE WHITE 28.00
Grand Total 66.13 33.87 100.00 Grand Total 86.00

Genotype Genotype
SOW Grand Total SOW
AA AB BB -
CHESTER WHITE 14 9 4 27 CHESTER WHITE 32
DUROC 4 7 1 12 DUROC 11
LANDRACE 1 4 2 7 LANDRACE 3
PIETRAIN 8 8 PIETRAIN 4
LARGE WHITE 19 4 3 26 LARGE WHITE 25
Grand Total 38 32 10 80 Grand Total 75

Genotype Genotype
BOAR Grand Total BOAR
AA AB BB -
CHESTER WHITE 1 4 5 CHESTER WHITE 4
DUROC DUROC
LANDRACE 2 2 LANDRACE
PIETRAIN 1 2 3 PIETRAIN 4
LARGE WHITE 1 1 1 3 LARGE WHITE 3
Grand Total 3 9 1 13 Grand Total 11
 Resistance
Grand Total
+
1 37
1 12
6 9
4 12
2 30
14 100

Genotype Frequency Grand Total

Allele Frequency
Grand Total
+
1.00 37.00
1.00 12.00
6.00 9.00
4.00 12.00
2.00 30.00
14.00 100.00

Genotype
Grand Total
+
32
1 12
4 7
4 8
2 27
11 86

Genotype
Grand Total
+
1 5

2 2
4
3
3 14
 GENOTYPE ALLELE
GENE AA AB BB A B
N (%) N (%) N (%) % %
ESR 61 61 39 39 0 0 80.5 19.5
PRLR 10 10.31 29 29.9 58 57.79 25.26 74.74
LIF 22 30.14 27 36.99 24 32.88 48.63 51.37
RBP4 41 44.09 41 44.09 11 11.83 66.13 33.87
Boars total esr prlr lif rbp4 myog pss
14 0 1 4 3 14 11
Sows total esr prlr lif rbp4 myog pss
86 0 9 20 38 86 75