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LIMSManual
Version 1.0 April 2012
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LIMSManual
INTRODUCTION Version 1.0 April 2012
SECTION 1
INTRODUCTION
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INTRODUCTION Version 1.0 April 2012
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LIMSManual
LOW LEVEL CONTROL Version 1.0 April 2012
SECTION 2
LOW LEVEL CONTROL
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2. 1. 1 PHYSICAL LAYER
2. 1. 1. 1 COMMUNICATION SPECIFICATIONS
Default
Item Specifications
value
2. 1. 1. 2 CONNECTORS
Connector on the Analyser is a D-sub 9pin Male.
Connector at the Analyser side of cable is a D-sub 9pin Female.
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2. 1. 1. 3 PIN ASSIGNMENT
Pin Signal
Number designation
1 CD
2 RD
3 TD
4 DTR
5 GND
6 DSR
7 RTS
8 CTS
9 RI
2. 1. 1. 4 INTERFACE SIGNALS
Table 1: Functions of interface signals
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2. 1. 1. 5 CABLE SPECIFICATIONS
The cable for host communication is RS-232C with the following cable connection.
ASCII
Designation Meanings Remarks
code
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2. 1. 2. 2 MESSAGE COMPOSITION
NOTE:
1. FN is the sequence number assigned to each frame and the ASCII text (0, 1, 2, 3,
4, 5, 6, and 7) is cyclically used. At reception of message with same sequence
number, handle as duplicate of re-transmission and discard the message. Messages
divided with ETB will have new sequence number. Initial value shall be 1.
2. TEXT is the division of ASCII text message itself and the number of characters for
one text is limited to less than 240 characters (including CR) and below.
(Addition of CR is optional settings. Tick on Send with CR by clicking the [Details]
button at the Host communications area in the System Setup 1 screen). Add Send
with CR when conforming ASTM rules.)
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3. ETX code (ASCII code: 03H) or ETB code (ASCII code: 17H)
4. In the checksum (Hex) frame, calculate the sum of bits of each message from FN
to ETX excluding STX and use last two digits. In the checksum calculation, apply shift
JIS code for Kanji code (2-byte characters) and add after breakdown into 1 high byte
+ 1 low byte. When the checksum does not match, discard the message.
When the text contains more than 240 bytes, divide into certain blocks by ETB (ASCII
code: 17H).
2. 1. 2. 3 TRANSMISSION PROCEDURE
A. Transmission of data from Analyser to Host.
In the figure above the control codes are shown in < > and detailed below.
1. Analyser transmits <ENQ> in order to establish a data link.
2. <ACK> is sent from Host after it is ready for communication.
3. Data 1 (intermediate frame) <ETB>
4. When Host has received the data correctly, <ACK> is sent to the Analyser.
5. End of data (last frame) <ETX>
6. Link is opened.
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NOTE:
Wait timer between characters is 100ms. At time out, the action will be the same
as receiving NAK.
At data re-transmission, sequence number should be the same as original data
transmission.
At data reception, characters before STX and after ETB and ETX should be
discarded.
All received data without sequential sequence number should be discarded.
Maximum retry of data re-transmission is five times. After the fifth retry, EOT will
be sent and change status to initialization. Error must be displayed in this
condition.
Host should return status to initialization after no connection for 20 seconds from
the Analyser.
Maximum retry for ENQ is ten. After the tenth retry, generate an error then start
over.
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HIGH LEVEL CONTROL Version 1.0 April 2012
SECTION 3
HIGH LEVEL CONTROL
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Code (Decimal
system)
NOTE: When double quotation (ASCII34) is found, discard it (do not treat as data.)
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Record type
1) Record type 1 Abandoned Used Disapproved
H
Delimiters
established in
2) Delimiter 4 Abandoned Used Disapproved this system (|,
back slash, ^
and &)
Message -
3) 0 - Unused -
control ID
Access -
4) 0 - Unused -
password
Name of
5) Name of 32 Abandoned Used Disapproved Analyser
Analyser defined in this
system.
Address of -
6) 0 - Unused -
sender
7) Reserved field 0 - Unused - -
Telephone -
8) number of 0 - Unused -
sender
Characteristic -
9) 0 - Unused -
of sender
10) Recipient ID 0 - Unused - -
Note or -
11) special 0 - Unused -
instruction
12) Process ID 0 - Unused - -
13) Version No. 0 - Unused - -
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The item is not used in this system and thus must be omitted.
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Process This
Process on
Field Max upon system
Designation Omission transmission
# digits reception used/
from Analyser
from Host unused
Record type
1) Record type 1 Abandoned Used Disapproved
P
Used for
transmission, Send as
3) Patient ID 13 Used Disapproved
display, and received.
print.
Laboratory
4) assigned 0 - Unused - -
Patient ID
5) Patient ID 0 - Unused -
#3 -
Used for
Patient transmission, Send as
6) 36 display, and Used Approved
Name received.
print. Up to 18
characters.
Mothers
7) Maiden 0 - Unused - -
Name
Used for
transmission, Approved Send as
8) Date of birth 8 display, and Used
(*1) received.
print.
YYYYMMDD
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Process This
Process on
Field Max upon system
Designation Omission transmission
# digits reception used/
from Analyser
from Host unused
Used for
transmission,
display, print
and normal
Approved
range Send as
9) Gender 1 Used (*2)
judgment. received.
M: Male
F: Female
U: unknown
(*2)
Used for
transmission, Send as
10) Race 16 Used Approved
display, and received.
print.
Used for
Attending transmission, Send as
14) 32 Used Approved
Physician ID display, and received.
print.
Used for
Special Field transmission, Approved Send as
15) 0 Used
1 display, and received.
print.
Used for
Special Field transmission, Approved Send as
16) 0 Used
2 display, and received.
print.(*3)
Patient
17) 0 - Unused - -
Height
Patient
18) 0 - Unused - -
Weight
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Process This
Process on
Field Max upon system
Designation Omission transmission
# digits reception used/
from Analyser
from Host unused
Patient
Known
19) or 0 - Unused - -
Suspected
Diagnosis
Patient
20) Active 0 - Unused - -
Medications
21) Patient Diet 0 - Unused - -
Practice
22) Field 0 - Unused - -
#1
Practice
23) Field 0 - Unused - -
#2
Admission
24) and 0 - Unused - -
Discharge
Dates
Used for
26) 70 transmission, Used Approved Send as
Location
display, and received.
print.
Nature of
Alternative
27) Diagnostic 0 - Unused - -
Code and
Classifiers
Alternative
28) Diagnostic 0 - Unused - -
Code and
Classifiers
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Process This
Process on
Field Max upon system
Designation Omission transmission
# digits reception used/
from Analyser
from Host unused
NOTE:
1. When Date of Birth is omitted, G2 will be used for normal range.
2. When Gender is omitted, Unknown will be used for Gender.
When selecting except F: Female for Gender, Male will be used for normal range.
3. Note 3: Code for Blood type is as follows:
Blood
Code
type
1 A Rh+
2 A Rh-
3 B Rh+
4 B Rh-
5 O Rh+
6 O Rh-
7 AB Rh+
8 AB Rh-
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Record type
1) Record type 1 Abandoned Used Disapproved
P
Used for
transmission, Send as
3) Sample ID 13 Used Disapproved
display, and received.
print.
4) Equipment 0 - Unused - -
specimen ID
Universal
5) Test 0 - Unused - -
ID
Used for
transmission,
display, and Send as
6) Priority 36 print. Up to Used Approved
received.
18
characters.
Date and
7) time 0 - Unused - -
of order
Used for
Date and
transmission, Approved Send as
8) time 8 Used
display, and (*1) received.
of sample
extraction print.
YYYYMMDD
Used for
transmission,
display, print,
Date and
and normal
time Approved
range Send as
9) of completion 1 Used (*2)
judgment. received.
of sample
extraction M: Male
F: Female
U: unknown
(*2)
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Used for
Extracted transmission, Send as
10) 16 Used Approved
volume display, and received.
print.
Name who
11) extracted 0 - Unused - -
sample
Treatment
12) 0 - Unused - -
code
13) Danger code 0 - Unused - -
Used for
transmission, Approved Send as
16) Sample type 0 Used
display, and received.
print.(*3)
17) Sample type 0 - Unused - -
Physicians
20) Telephone 0 - Unused - -
Number
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Date/Time
23) Results 0 - Unused - -
Reported or
Last Modified
Instrument
24) Charge to 0 - Unused - -
Computer
System
Used for
26) 70 transmission, Used Approved Send as
Report Types
display, and received.
print.
Location or
28) Ward of 0 - Unused - -
Specimen
Collection
NOTE 1: Universal Test ID for test order record when ISE of ASTM is separated.
(Tick on ASTM ISE separation by clicking the [Details] button at the Host
communications area in the System Setup 1 screen).
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Universal
Test ID Description
(2-digit)
00 No order
01-60 Clinical chemistry
Analyser transmits Universal Test ID with
zero
suppression when the ID # is from 1 to 9.
61 ISE Na
62 ISE K
63 ISE Cl
64 Diluted ISE Na
65 Diluted ISE K
66 Diluted ISE Cl
81 Serum information (H, L, I)
Universal Test ID for test order record when ISE of ASTM is not separated.
Universal
Test ID Description
(2-digit)
61 ISE (Na, K, Cl)
62 Diluted ISE (Na, K, Cl)
Use delimiter ^ for delimiting test ID and use for multiple entry of test ID.
(Example 1) In case of ordering Test ID #1,
O|1|001||^^^01
(Example 2) In case of ordering Test ID #15, 21, and 30,
O|1|001||^^^15^^^21^^^30
The Test ID # is described at each part delimited by ^ when ASTM is not complied.
(Example 1) In case of ordering Test ID #1,
O|1|001||01
(Example 2) In case of ordering Test ID #15, 21, and 30,
O|1|001||15^21^30
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Sample
Description
type
01 Unused
02 Serum
03 Urine
04 Plasma
05 Others
* When Sample type is omitted, the selected sample type as the default Sample
Type is applied at the Sample Type Setting from the [Details] button at the Host
communications area in the System Setup 1 screen.
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Record type
1) Record type 1 Abandoned Used Disapproved
R
Method #: 0 to
Universal Test Abandoned 3999
3) 5 Used Disapproved
ID Refer to the
table below.
ZZZZZZZZZZ
9.99999
Decimal point
that specified
in the
[Chemistry
4) Test results 17 Abandoned Used Disapproved Parameter 1]
screen. When
the value
resulting in the
****, it will be
printed
as ****.
Unit for the
5) Unit 8 Abandoned Used Disapproved
test results
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Followings are
sent:
Technical
range code,
Normal range
code, Error
7) Flag 42 Abandoned Used Disapproved flag code,
Rerun result
flag code, and
QC flag code
1-10. Refer to
3.7.1. Test
result error
flag code.
When it is within
8) the reference 0 - Unused - -
range,
9) Status 0 - Unused - -
Instrument Unused
14) 0 - - -
identification
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Universal
Test ID Description
(2-digit)
00 No order
01-60 Analyser transmits Universal Test ID
with zero suppression when the ID # has
a single digit from 1 to 9.
61 ISE Na
62 ISE K
63 ISE Cl
64 Diluted ISE Na
65 Diluted ISE K
66 Diluted ISE Cl
81 Serum information (H)
82 Serum information ( L)
83 Serum information (I)
In case Full compliance with ASTM rules, Use delimiter ^ for delimiting test ID.
(Example 1) In case of transmission of the result of the test ID # 61 to the Host,
R|1|^^^61|346|mmol/l||00^01^00||||||20040119143714
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00 - Normal -
Sample shortage SPT cannot detect liquid level
01 SS
at ASP.
Out of the range of the The result of SPT liquid
02 SS sample volume detection at ASP is out of
range.
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Code Description
6. QC flag code # 1 to 10
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Last two results exceed 00: Normal, 01: Warning, 02: Error
4 2SD
range
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Patient G Abandoned
Order G Reflect sample
information. (*1)
Result - Unused:
Scientific G Abandoned
Manufacture G Abandoned
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Patient 0 - Unused - -
19)
Birthdate
20) Patient Sex 0 - Unused - -
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COMMUNICATION MODE Version 1.0 April 2012
SECTION 4
COMMUNICATION MODE
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The following table describes the test ordering functions for each communication
mode.
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NOTE:
An emergency sample should be handled locally not via Host.
The results for normal, emergency, online, and QC samples can be sent to Host.
All results obtained at Off Line, Batch, and Real Time modes will be stored in one
database.
The batch mode is a batch mode with a capability of real time result transmission
to the Host.
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COMMUNICATION MODE Version 1.0 April 2012
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COMMUNICATION SEQUENCE Version 1.0 April 2012
SECTION 5
COMMUNICATION SEQUENCE
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When reply from the Host is <NAK> or no response, Analyser will re-try up to 6
times. If <NAK> or no reply continues for 6 times, Analyser will generate error
message and will not proceed with the round.
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NOTE:
Comment information can be omitted.
There can be multiple messages of test order and result for one patient
information.
Result record with error flag is not transmitted when it is set not to transmit result
record when error occurred.
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NOTE:
When there is no order for inquired sample, return order information with empty
universal test ID field (00).
When rerun is not required at host rerun mode, return order information with
empty universal test ID field (00). However, auto rerun is performed for the
method which is set as auto rerun.
Comment information can be omitted.
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NOTE:
Result is sent for one method per sample at a time.
Universal test ID for test order record is transmitted as ID with the result.
The lines H to L are not transmitted when it is set not to transmit result record
when an error occurred.
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1) 1)
2) 1) 2)
3) 1) 2) 3)
4) 1) 2) 3) 4)
5) 1) 2) 3) 4) 5)
6) 1) 2) 3) 4) 5) 6)
7) 1) 2) 3) 4) 5)6)7)
8) 1) 2) 3) 4) 5) 6) 7) 8)
9) 1) 8) 9)
10) 1) 8) 9) 10)
5. 4. 2 RECEPTION ERROR
A. Error during batch order Inquiry to Host and its response
When message 4) is not received for T1 time out time after transmitting 3), it will be
handled as described in the table below. The messages 5) to 14) will be handled as
an error if the message is not received for T2 time out time.
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NOTE: Perform re-transmission three times (Max.). When re-try over occurs, an
alarm message is displayed.
T1: 10 sec., T2: 5 sec.
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Error Re-transmission
occurring message
message
5. 4. 3 ABNORMAL DATA
Following are error handlings when abnormal data is found:
A. Sequence Number
A duplicate sequence number will be discarded.
A missing sequence number will be inquired.
B. Abnormal data
Type of
Type of Field Description
Message
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Type of
Type of Field Description
Message
Test order Test orders with methods such as not registered and
Method reagent shortage will not be run. At reception, a
warning message is displayed. Other available tests
ordered together with invalid methods will be run.
5. 4. 4 RETRY OVER
Sequence Process
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REFERENCE Version 1.0 April 2012
SECTION 6
REFERENCE
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The general identification code corresponds to the SID with a suffix added
depending on the number of measurements performed on that specific sample.
The general identification code is displayed on the SID column in the Round
screen.
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*1
When using CCD barcode reader and UPC-A for the sample barcode type, add 0
digit on the head of SID to make it 11 digits in total.
*2
When using Laser barcode reader and UPC-A for the sample barcode type, use 11
digits for SID.
*3
When using UPC-E for the sample barcode, add 0 on the head of SID to make it 7
digits in total.
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B. Barcode structure
Barcode label
location
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1. Auto rerun
The order inquiry to the Host will not be executed.
2. Confirm host for rerun
Host rerun will be executed only when the Host requires for rerun after the order
inquiry.
3. Inquire host for rerun
Host rerun will be executed when the Host sends any responses after the order
inquiry.
C. Host communications
Specify the communication setting to the Host.
6. [Details] button
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Retry settings
Specify the number of each retry for high layer and lower layer.
High layer: select the number (1 to 6) from the drop-down menu.
<default setting: 6.>
Lower layer: select the number (1 to 6) from the drop-down menu.
<default setting: 3>
Result unit
Specify the result transmission unit.
Select By Method or By Sample.
<default setting: By Method>
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