Beruflich Dokumente
Kultur Dokumente
a r t i c l e i n f o a b s t r a c t
Article history: The aim of this study was to optimize the culture conditions for keratinase production by a new isolate,
Received 6 April 2015 Streptomyces sp. 2M21 utilizing chicken feather as an alternative low-cost substrate. Contribution of
Received in revised form different independent fermentation variables on keratinase activity was investigated by Plackett-Burman
25 April 2015
design. Parameters that have the highest contribution were selected for the optimization experiments
Accepted 25 April 2015
which were carried out by using response surface methodology (RSM). Relative and mutual effects of
Available online
fermentation variables on keratinase activity were analyzed with “23 Full Factorial Central Composite
Design”. Cultivation processes were implemented in 250 ml Erlenmeyer flasks containing 50 ml medium.
Keywords:
Fermentation
Maximum keratinase activity was obtained under optimal conditions of 28 C, 5.0 g l1 chicken feather
Environmental biotechnology and 5.5 days of process time. As a result of the optimization studies, a 15 fold increase in keratinase
Keratinase activity was reached compared to the unoptimized conditions. Furthermore, similar results were ob-
Feather tained in the 2 l bioreactor under optimized conditions.
Experimental design © 2015 Elsevier Ltd. All rights reserved.
Optimization
http://dx.doi.org/10.1016/j.ibiod.2015.04.025
0964-8305/© 2015 Elsevier Ltd. All rights reserved.
T. Demir et al. / International Biodeterioration & Biodegradation 103 (2015) 134e140 135
Several reports are available presenting statistical optimization of named as Streptomyces sp. 2M21. 16S rDNA sequence was compared
keratinase production by using chicken feather. However optimi- with the data accessible through NCBI (National Centre for
zation has not been used as a tool for scale-up for keratinase pro- Biotechnology Information) using BLASTN. DNA sequence of the
duction (Ramnani and Gupta, 2004; Thys et al., 2004; Anbu et al., isolate 2M21 was deposited to GenBank under Accession number
2005; Bernal et al., 2006; Casarin et al., 2008; Rai et al., 2009; Rai JX000224.
and Mukherjee, 2011). The aim of this study is to focus on the
optimization of keratinase production by a new isolate, Strepto- Design of experiments and statistical analysis
myces sp. utilizing chicken feather, as a raw material and use this
approach for scale-up. Selection of the key fermentation parameters for optimization of
keratinase production through keratinase activity was performed
Materials and methods according to Plackett-Burman design. Following the selection step,
optimization experiments were carried out by using response
Microorganisms surface methodology (RSM) with “23 Full Factorial Central Com-
posite Design (CCD)”.
In this study, alkaliphilic actinomycetes strains (180 strains) Design Expert Software 7.0.0 (Stat-Ease, Inc., Minneapolis, USA)
from Actinomycetes Culture Collection (ACTINOCC) founded by was used for experimental designs, regression and variance anal-
Bioengineering Department of Ege University, registered to World ysis of models and calculation of polynomial model equations.
Federation of Culture Collections No. 952 were used. Analysis of variance (ANOVA) was used to evaluate the interaction
of variables with the predicted response.
Chicken feathers
Plackett-Burman experimental design
Feathers were obtained from a local poultry processing plant
Nine fermentation variables; time, temperature, pH, inoculum
lu Co., Manisa, Turkey) were washed with warm distilled
(Keskinog
size, amount of feather, concentrations of CaCO3, NaCl, K2HPO4,
water and dried at 45 C in an incubator for 2 days. Dried feathers
MgSO4$7H2O were used in the design. Each parameter was tested,
were autoclaved at 121 C for 45 min and stored at room temperature.
in 250 ml Erlenmeyer flasks (50 ml medium) with continuous
mixing (150 rpm), at two levels (maximum: “þ” and minimum:
Screening and selection of the strain
“”) (Table 1) in the defined experimental design matrix (Table 2).
The values of the tested parameters were determined according to
Preliminary screening experiments were implemented using
the preliminary experiments considering their effects on keratinase
agar plates technique for the 180 alkaliphilic actinomycetes strains.
production. Two dummy factors in the experimental design were
In this step protease activity of the strains were evaluated by single
added and statistical analysis was performed with 12 experiments.
point inoculation of actinomycetes onto agar plates (containing
The first order polynomial is used to predict the response of
g l1: starch 10, yeast extract 4, peptone 2, skim milk 10 and agar 15;
variables:
pH 10). The plates were then incubated at 28 C for 3 days and 10
X
promising protease producers were selected according to the ratio of Y ¼bþ b i xi
clear zone diameter around the colony to the diameter of the colony.
Selected strains were then investigated for their feather degra-
where Y is the predicted response, b is the model intercept is the
dation ability using chicken feather as the sole carbon and nitrogen
linear coefficient and is the level of the independent variable.
source. For this purpose these strains were cultivated in 250 ml
Erlenmeyer flasks with 50 ml of mineral salt medium (g l1: CaCO3
Response surface methodology for optimizing the selected
5, NaCl 5, K2HPO4 3, feather 5; at pH 8.0, 28 C, 150 rpm for 6 days
fermentation conditions
inoculated with 108 spores ml1). Produced mycelial biomass and
RSM was used for the optimization of fermentation conditions
residual solid substrate were removed by centrifugation (Hettich
(in 250 ml Erlenmeyer flasks with 50 ml mineral salt medium,
Universal, 32) at 5000 rpm for 3 min. Cell free fermentation broth
continuous mixing at 150 rpm, utilizing 8 108 spores ml1) tar-
was used for extracellular keratinase activity assay.
geting maximum keratinase activity. The experiments were
designed by CCD with three key factors, namely temperature, time
Keratinase activity assay
and the amount of feather, which were selected according to their
impact on the keratinase activity through Plackett-Burman design.
Keratinase activity was measured according to Delmar et al.
The design matrix was consisted of 20 experimental runs at five
(1979). Suc-Ala-Ala-Pro-Phe-NA (BaChem) was dissolved in
different levels including 8 factorial points, 6 axial points and 6
mixture of 0.05 M TriseHCl (pH 8) buffer and dimethyl sulfoxide
(DMSO) (Merck Chemicals) [1:99 (v v1)] and used as substrate
solution. The reaction mixture (140 ml of 0.05 TriseHCl buffer, 50 ml
of 2 mM substrate solution and 10 ml of cell free fermentation broth) Table 1
Minimum and maximum levels of variables used in Plackett-Burman.
was incubated at 37 C for 10 min. Amount of released pNA (p-
nitroanilide) was measured by using spectrophotometer (Versa- Variable Symbol Minimum Maximum
Max, USA) at 405 nm against the blank which consisted of 150 ml of values () values (þ)
TriseHCl buffer and 50 ml of substrate solution. One unit of kera- Time x1 1 day 4 days
tinase activity was defined as the amount of enzyme required to Temperature x2 20 C 30 C
liberate 1 mmol pNA under standard conditions. pH x3 5.0 9.0
Feather x4 5 g l1 20 g l1
Inoculum size x5 4*108 spores ml1 8*108 spores ml1
Identification of the strain CaCO3 x6 0 g l1 5 g l1
NaCl x7 0 g l1 5 g l1
The strain selected with regards to the highest keratinase ac- K2HPO4 x8 0 g l1 1 g l1
MgSO4$7H2O x9 0 g l1 1 g l1
tivity was identified according to 16S rDNA sequence analysis,
136 T. Demir et al. / International Biodeterioration & Biodegradation 103 (2015) 134e140
Table 2
Plackett-Burman experimental design matrix and experimental results.
Run Variable Time Temp. pH Feather Inoculum CaCO3 NaCl K2HPO4 MgSO4$7H2O Dummy Keratinase
variables activity (U ml1)
Effect (%) 29.62 40.80 1.12 10.25 0.016 7.93 2.40 3.735E-003 7.01
1 þ þ e þ þ þ e e e þ e 55.26
2 e þ þ e þ þ þ e e e þ 25.53
3 þ e þ þ e þ þ þ e e e 35.34
4 e þ e þ þ e þ þ þ e e 17.54
5 e e þ e þ þ e þ þ þ e 3.21
6 e e e þ e þ þ e þ þ þ 3.09
7 þ e e e þ e þ þ e þ þ 8.97
8 þ þ e e e þ e þ þ e þ 35.99
9 þ þ þ e e e þ e þ þ e 27.09
10 e þ þ þ e e e þ e þ þ 30.43
11 þ e þ þ þ e e e þ e þ 20.36
12 e e e e e e e e e e e 1.31
replicates at the center point. The actual values of the variables at water prior to inoculation to the bioreactor. At the end of the
different levels were shown in Table 3. production cell free fermentation broth was achieved for kerati-
Second order polynomial is used to predict the response of nase assay.
variables:
X X X Results and discussion
Y ¼ b0 þ bi xi þ bii x2i þ bij xi xj
The key in the selection of the process variables was based on
where Y is the predicted response, b0 offset term, bi linear effect, bii the nature of keratinase production. Feather was used as the sole
squared effect, bij interaction effect. carbon and nitrogen source, and a culture medium was defined
with the help of the other studies, with feather and mineral salts
Production in 2 l bioreactor (Letourneau et al., 1998; Mohamedin, 1999; Syed et al., 2009;
Vasileva-Tonkova et al., 2009). Utilization of this simple me-
Scale up was carried out by using a 2 l stirred tank bioreactor dium has fewer variables to analyze for successful optimization.
(Sartorious Biostat A, Germany) batch wise (in triplicate) with a This also supported the aim of the study providing an approach
working volume of 1.5 l under the optimized conditions (28 C, for scale-up with cost effectiveness, using an alternative by-
5 g l1 feather in mineral salt medium, pH 8.0, 5.5 days). Mixing was product.
provided with 150 rpm agitation and 1.25 vvm aeration rate.
Inoculum was prepared in 250 ml Erlenmeyer flasks with Screening of keratinase producers and identification of isolate 2M21
50 ml glucose-yeast extract (GY) broth (containing g l1: glucose
10, yeast extract 2, peptone 25, K2HPO4 0.1 and pH 8.0) with After the screening stage, isolate 2M21 was selected as the
continuous mixing at 150 rpm, utilizing 8 108 spores ml1 for highest keratinase producer with a keratinase activity of 32 U ml1.
36 h. Produced mycelial biomass in GY broth was collected by The 16S rDNA gene sequences shares 99% homology with that of
centrifugation at 5000 rpm for 5 min and suspended in distilled Streptomyces genus.
Table 3
CCD matrix with predicted and experimental responses.
Table 4
ANOVA results for Plackett-Burman design.
Source Sum of squares Degrees of Mean square F-value P-value Prob > F
freedom
Optimization of keratinase production other parameters especially the mineral salts such as CaCO3 (7.93%),
MgSO4$7H2O (7.01%) and NaCl (2.4%) had some effect on the pro-
Plackett-Burman design duction monitored by the activity of keratinase, their influence was
Based on the statistical analysis of the model, effects of the var- weak compared to three major parameters reaching a total impact of
iables are represented in Table 2. The ANOVA results for the Plackett- 80.67% (Table 2). This comparison was the main goal for the selection
Burman design are presented in Table 4 giving detailed information of the first 3 parameters to be used as the building block of the CCD.
about the model terms. The Model-F value (25.64) showed that the Effects of the medium components including NaCl, CaCO3,
model is significant (Table 4). There is only a 3.81% chance that a MgSO4$7H2O and K2HPO4 were insignificant but Streptomyces sp.
“Model-F value” could occur due to noise. The determination coef- 2M21 required these components for growth and keratinase pro-
ficient (R2) that explains the consistence of predicted and actual duction. Therefore, concentrations of these components were used
responses with a value of 0.9914 validated the model. Adequate at standard amounts in the mineral salt medium (pH 8.0) and
precision value which measures the signal to noise ratio was inoculum size (8.108 spores ml1).
determined as 17.097 which is greater than desirable ratio (4) In order to determine the optimum values of the selected vari-
indicating that this model can be used to navigate the design space. ables and to investigate their mutual interaction on keratinase
According to the statistical analysis, time, temperature, amount of production, analysis was performed at five different levels by CCD.
feather are significant (p < 0.05) and their contribution percentages The design matrix calculated from regression model with respect to
showed that highest contribution was with temperature (40.80%), experimental and predicted responses is presented in Table 3.
followed by time (29.62%) and feather amount (10.25%) (Table 2). Experimental results were correlated as a second order polynomial
pH, inoculum size, concentrations of NaCl, CaCO3, MgSO4$7H2O and model. The empirical relationship between predicted keratinase
K2HPO4 are insignificant terms (Table 4). The influence of time, activity and variables in coded units regardless of their significance
temperature, amount of feather, concentration of CaCO3 are positive, was expressed as following quadratic equation:
the variables including inoculum size, NaCl, K2HPO4 and
MgSO4$7H2O have negative influence on keratinase production at Y ¼ 366:88 þ 75:31A þ 13:99B þ 85:15C þ 10:34AB 90:84AC
their high levels. Previous reports related to optimization of kera-
tinase from Bacillus species using Plackett-Burman and RSM also 19:53BC 69:38A2 þ 1:74B2 43:45C 2
showed that mineral salts had some effect or were even ineffective
in the keratinase production (Ramnani and Gupta, 2004; Tatineni where Y is the predicted keratinase activity, A, B, C are coded values
et al., 2007; Fakhfakh-Zouari et al., 2010). of temperature, amount of feather and time, respectively.
Statistical significance of the model was analyzed using Fischer's
Response surface methodology F test and the analysis of variance of the model is shown in Table 5.
Plackett-Burman design showed that the major influencing pa- According to the statistical analysis, the P value of the quadratic
rameters were time, temperature and amount of feather. Even if regression model was found to be much smaller (<0.0001) than the
Table 5
ANOVA results for CCD.
Source Sum of squares Degrees of Mean square F-value P-value Prob > F
freedom
References
Anbu, P., Gopinath, S.C.B., Hilda, A., Lakshmi priya, T., Annadurai, G., 2005. Purifi-
cation of keratinase from poultry farm isolate- Scopulariopsis brevicaulis and
statistical optimization of enzyme activity. Enzyme Microb. Technol. 36,
639e647.
Anbu, P., Hilda, A., Sur, H.-W., Hur, B.-K., Jayanthi, S., 2008. Extracellular keratinase
from Trichophyton sp. HA-2 isolated from feather dumping soil. Int. Biodeterior.
Biodegred. 62, 287e292.
Bernal, C., Diaz, I., Coello, N., 2006. Response surface methodology for the optimi-
zation of keratinase production in culture medium containing feathers pro-
duced by Kocuria rosea. Can. J. Microbiol. 52, 445e450.
Brandelli, A., 2008. Bacterial keratinases: useful enzymes for bioprocessing agro-
industrial wastes and beyond. Food Bioprocess Technol. 105e116.
Brandelli, A., Daroit, D., Riffel, A., 2010. Biochemical features of microbial kerati-
nases and their production and applications. Appl. Microbiol. Biotechnol. 85,
1735e1750.
Cai, C., Lou, B., Zheng, X., 2008. Keratinase production and keratin degradation by a
mutant strain of Bacillus subtilis. J. Zhejiang Univ. Sci. B 9, 60e67.
Casarin, F., Cladera-Olivera, F., Brandelli, A., 2008. Use of poultry byproduct for
production of keratinolytic enzymes. Food Bioprocess Technol. 1, 301e305.
Çetinel-Aksoy, S., Uzel, A., Hameş-Kocabaş, E.E., 2012. Extracellular serine proteases
produced by Thermoactinomyces strains from hot springs and soils of West
Anatolia. Ann. Microbiol. 62, 483e492.
De Azeredo, L.A.I., De Lima, M.B., Coelho, R.R.R., Freire, D.M.G., 2006. A low-cost
fermentation medium for thermophilic protease production by Streptomyces sp.
Fig. 2. (a) the insoluble, floating structure of feather (b) the fermentation medium in 594 using feather meal and corn steep liquor. Curr. Microbiol. 53, 335e339.
2 l bioreactor at the end of 24 h (c) the fermentation medium in 2 l bioreactor at the Delmar, E.G., Largman, C., Brodrick, J.W., Geokas, M.C., 1979. A sensitive new sub-
end of 48 h. strate for chymotrypsin. Anal. Biochem. 99, 316e320.
140 T. Demir et al. / International Biodeterioration & Biodegradation 103 (2015) 134e140