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Introduction to LOINC
The global vocabulary for identifying health measurements,
observations, and documents
© 2018 © 2018
Welcome to the
LOINC Community
📷 jamescridland | cc-by
High Level Outline
📷 Vernio77 | cc-by-sa
Slides available at:
https://danielvreeman.com/
ticsalutsocial
Interoperability
Why it matters
Connecting Many Data Sources
Semantic Standards
Vocabulary/code systems
LOINC, SNOMED CT, RxNorm, HPO, ICD, MONDO
The Superhero Origin Story
Life without LOINC…
CODE NAME
AGTCE Angiotensin Converting Enzyme
5523 ACE SerPl Qn
ACE ACE
22441 AngioTens Conv Enz
99234 ACE (angiotensin)
25284D Angiotensin-1-Converting Enzyme
2737317 ACE (serum)
6881A Angiotensin Converting Enzyme, Ser
3800ACE ANGIOTENSIN CONVERTING ENZYME, S
77934A Angio Convt Enzym
919109 ACE, SERUM
34ACE Angiotensin Con. Enz
ANGCE Angiotensin CE
6621456 Angio. Conv. Enzyme
The universal standard for identifying health
measurements, observations, and documents.
8462-4 Diastolic blood pressure 63736-3 Materials to which you were exposed in your
work or daily life
24725-4 Head CT
63805-6 How long did you handle paints or solvents
57021-8 CBC W Auto Differential panel - Blood yourself?
📷 glasgowamateur | cc-by-sa
📷 unamid-photo | cc-by-nd
LOINC is famous for lab test content,
but you still might not know about…
Newborn screening
Full set of terms, included in HL7 IG Lab Results Interface (LRI)
Genetic reporting
2000+ tests, including collections for structured reporting of simple variants, structural and copy number variants, complex variants,
and pharmacogenomic studies. [PMID: 25656513] See HL7 LRI and the developing FHIR CG IG.
Orders
Not only single tests, but 1,000+ order panels and a consensus-vetted list of 1,500 order codes covering 95% of common volume. See
loinc.org/usage/orders
Public health
Close work with CDC on emerging diseases and reportable conditions
Codes for individual observations
6690-2 Leukocytes [#/volume] in Blood by Automated
2339-0 count
Glucose [Mass/volume] in Blood
29463-7 Body weight
55423-8 Number of steps in unspecified time Pedometer
📷 quinnanya | cc-by-sa
LOINC Term
A representation of a question about a clinical
phenomenon that can be observed or measured.
LOINC Code
LOINC Fully Specified Name
LOINC Code
18262-6
Short Name
Column header, old-school systems with character limits
Display Name
New provider-friendly display name (rules are still under development)
Example LOINC Names
Fully-Specified Name (FSN)
Urea nitrogen:MCnc:Pt:Ser/Plas:Qn:
Short Name
BUN SerPl-mCnc
Display Name
Urea nitrogen [Mass/Vol]
LOINC Fully Specified Name
Includes the info necessary to distinguish among
clinically important differences
Property MCnc
Timing Pt
System Ser/Plas
Scale Qn
Examples
Component
Sodium
Glucose
Brucella sp. identified
HIV 1 p24 antigen
Cytomegalovirus antibody
Body weight
Examples
LOINC Abbreviation Property Example units
MCnc Mass concentration mg/dL
SCnc Substance concentration umol/L
MCnt Mass content mg/g
CCnc Catalytic concentration U/L
Prid Presence or identity
Examples
LOINC Abbreviation Time Aspect
Pt Point in time
12H 12 hour collection
24H 24 hour collection
7D 7 days (look back period)
Examples
LOINC Abbreviation System
Bld Whole blood
Ser/Plas Serum or plasma
Tiss Tissue
Unknown, unspecified in the test name, and/
XXX
or specified in another part of the message
Examples
LOINC Abbreviation Scale
Qn Quantitative * can have operators
Ord Ordinal
Nom Nominal
Nar Narrative
Doc Document
📷 quinnanya | cc-by-sa
Scan LOINC axes to notice the
differences needing closer inspection
📷 jdhancock | cc-by
Local tests names are:
Notoriously short
Lacking info needed for mapping
LOINC Units
Relax…
You can still use local terms too
OBX||NM|123^RBC^MyHosp^26453-1^RBC # Bld^LN||4.82|10*6/uL
Local term LOINC term
📷 beatlesmania11 | cc-by
Argonaut Project FHIR IG / US Core IG
Data element query of the ONC Common Clinical Data Set and Document query
Observation.code
Other uses
All Document type codes
All Section codes
Vital sign observations
ADL result type
Food and Nutrition and anthropometric variables
Skin and wound measurements
Key IHE Profiles with
LOINC support
Laboratory Analytical Workflow (LAW)
Laboratory Testing Workflow (LTW)
Laboratory Code Sets Distribution (LCSD)
📷 jurvetson | cc-by
Regenstrief Institute, Inc
A non-profit organization driven by a mission to connect and innovate for better health
Long history of developing, applying, and scaling health information technology solutions
Creator, owner, and steward (i.e. Standards Development Organization) for two key
interoperability standards: LOINC and UCUM
LOINC Committee
Advisory body to Regenstrief that sets naming conventions and development policies
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LOINC Terms Over Time
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laboratory terms only
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Lots cooking…
Always new lab tests
Public health: emergent issues, surveillance, case reports
Document titles
Patient reported outcomes
Cardiovascular and other clinical measurements
New data models for genetics [HL7]
Patient reported outcomes [PCORI]
Social determinants of health [many]
MANY active collaborations with other orgs…
📷 liber | cc-by
Many Active Collaborations
HL7
IEEE
CDISC
IICC
DICOM
SNOMED International
RSNA
Using LOINC and SNOMED CT Together
Collaboration agreement endorses using both
IHTSDO endorses the use of LOINC Codes for representation of orders and
observations in countries where LOINC has been adopted.
How?
LOINC provides codes that represent the names of information items (e.g.
questions) and SNOMED CT provides codes that may represent nominal and
ordinal values (e.g. answers) for these named information items.
Using LOINC and SNOMED CT
In an HL7 version 2 message
CE (coded
element) answer Observation: LOINC
Result Value:
SNOMED CT
Vocabulary standards grow
because USERS ask
(broad user community drives new content)
© 2018 © 2018
High Level Outline
📷 Vernio77 | cc-by-sa
71,000+ registered users from 174 countries
Registered Users
70,000
65,000
60,000 De-dupe & Purge!
55,000
search.loinc.org
50,000 login requirement
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http://international-patient-summary.net
International Telecommunication Union
specifies a common health schema for health systems – e.g., clinical and wellness – and
describes the supporting services and systems architecture for a health data exchange
https://www.itu.int/ITU-T/recommendations/rec.aspx?rec=12163&lang=en
Canada
https://www.ehealthontario.on.ca/en/
https://infocentral.infoway-inforoute.ca/en/standards/international/loinc
France
https://www.legifrance.gouv.fr/affichTexte.do?cidTexte=JORFTEXT000031922237&categorieLien=id
http://esante.gouv.fr/sites/default/files/CI-SIS_CONTENU_VOLET-CR-BIOLOGIE_v1.2.0.0.pdf
https://esante.gouv.fr/sites/default/files/asset/document/20150504_etude_terminos_phase2_diagnostic.pdf
Belgium
https://www.health.belgium.be/nl/terminologiecentrum-terminologie-en-condestelsels-retam
Portugal
http://www.ctc.min-saude.pt/category/catalogos/cpal/
Austria
Seerainer C, Sabutsch SW. eHealth Terminology Management in Austria. Stud Health Technol Inform. 2016;228:426-30. PubMed PMID: 27577418.
Italy
https://www.fascicolosanitario.gov.it/sistemi-codifica-dati/informazioni/loinc
Netherlands
Nictiz
Many national projects are using LOINC
https://www.rivm.nl/Documenten_en_publicaties/Algemeen_Actueel/Nieuwsberichten/2018/Vijf_labs_operationeel_bij_Eenheid_van_Taal_in_antibioticaresistentie
http://www.cchi.gov.sa/en/Projects/SHIP/Pages/Dictionary.aspx
Russia
Standardized lab test catalog based on LOINC and a laboratory result interface bus
using HL7 FHIR
Now, ~450k tests per month flowing
Delivering results to patient’s “personal office”
Kopanitsa G. Application of a Regenstrief RELMA V.6.6 to Map Russian Laboratory Terms to LOINC. Methods Inf Med. 2016;55(2):177-81. Epub 2015 Dec 15. PubMed PMID: 26666563.
http://www.iksmedia.ru/articles/5434116-Prakticheskaya-polza-informatizacii.html
India
https://www.nhp.gov.in/NHPfiles/EHR-Standards-2016-MoHFW.pdf
https://www.nhp.gov.in/categories-for-adoption-of-standards_mtl
Qatar
http://www.sch.gov.qa/announcements/announcement-details?item=257&backArt=180&page=1
Brazil
Used in São Paulo regional data exchange project for many years
http://bvsms.saude.gov.br/bvs/saudelegis/gm/2011/prt2073_31_08_2011.html
Thailand
The study shows that LOINC can be used and should be adopted in Thailand.
http://www.this.or.th/files/interopbook.pdf
Pontongmak W, Kijsanayotin B, Min Thit W, Looareesuwan P. Mapping Thai local laboratory codes with LOINC: the preliminary report. Journal of the Thai Medical Informatics Association. 2015; 1: 44-50.
Pontongmak W, Kijsanayotin B, Rattanapradit A, Min Thit W. Mapping local clinical chemistry code with LOINC. Journal of the Thai Medical Informatics Association. 2015; 1: 38-43.
Malaysia
Ministry of Health
National Health Informatics Committee and Ministry pathologist
adopted LOINC for lab data standardization (in LIS’s)
https://myhdw.moh.gov.my/public/documents/20186/169489/MyHDW+2015-2016/86b7603a-eab4-40c0-aa94-35ded673838d
https://myhdw.moh.gov.my/public/home
Saudi Arabia
http://www.cchi.gov.sa/en/Projects/SHIP/Pages/Dictionary.aspx
Turkey
http://www.cchi.gov.sa/en/Projects/SHIP/Pages/Dictionary.aspx
Hong Kong
In early 2018, Hong Kong Adventist Hospital became first private hospital in
Hong Kong using LOINC as its standard terminology for laboratory test
results sharing to EHR
https://loinc.org/adopters/hong-kong-hospital-authority/
https://www.ehealth.gov.hk/en/publicity_promotion/ehealth_news_09/u_lab_test_code_system.html
China
China
EHRSC Interoperability Profile: Clinical Laboratory Test Results Sharing adopted LOINC; used in
several regional health information sharing projects
Integrated disease surveillance system in Beijing with lab data standardized with LOINC
Experts from six AAA-level hospitals in Zhejiang mapped province social insurance codes to
LOINC in this interoperability framework
National Health and Family Planning Commission (NHFPC) evaluated LOINC use
Jun Liang, MeiFang Xu, LiZhong Zhang, LanJuan Li, XiaoLin Zheng, DeRen Chen, ShengLi Yang, BaoLuo Li, Ou Jin, Zhou Ji, JunXiang Sun. Developing Interoperable Electronic Health Record Service in China. International Journal of Digital Content Technology and its Applications. 2011 (5):4 pp 280-295.
Xiaohui Zhang, Yun Ding, Zhijue Chen, Charles Schable. Development of an Integrated Surveillance System for Beijing. Advances in Disease Surveillance 2007;2:127
And many more…
Everyone loves LOINC
📷 mccaughan | cc-by-sa
Current U.S. Landscape
Brief Summary of LOINC Adoptions
Office of the National Coordinator for Health IT
USDA
Animal and Plant Health Inspection Service (APHIS)
National Institute of Food and Agriculture (NIFA)
https://www.nahln.org
Nursing Association Support
https://www.nursingworld.org/practice-policy/nursing-excellence/official-position-statements/id/Inclusion-of-Recognized-Terminologies-Supporting-Nursing-Practice-within-Electronic-Health-Records/
https://www.nursingoutlook.org/article/S0029-6554(13)00247-9/pdf
https://www.allianceni.org/statements-positions
Real world LOINC use (U.S.)
Reference labs have all mapped observations
Orders are a work in progress
The big research networks use it in CDMs: OHDSI, PCORnet, Mini-Sentinel, etc.
PCORnet reports 94% LOINCed lab results in its network
https://support.apple.com/en-us/HT208647
Collect once. Use many.
Clinical care, public health reporting, quality management, clinical and
epidemiological research, etc…
📷 pagedooley | cc-by
If this, then that…
Then
Order {81154-7 Dengue & Chikungunya & Zika virus pane}
Population Health Analytics
📷 Fishking_1 | cc-by
https://ivdconnectivity.org/livd/
https://usdiagnostics.roche.com/en/documentation.html#/q/loinc/s/SCORE_DESC
Use LOINC’s many implementation resources
Pareto principle
A few tests account for most volume
70% of tests take 30% of mapping time
Vreeman DJ, Finnell JT, Overhage JM. A rationale for parsimonious laboratory term mapping by frequency. AMIA Annu Symp Proc. 2007 Oct 11:771-5. PMID: 18693941.
📷 elwillo | cc-by http://www.himss.org/news/interoperability-not-all-juice-worth-squeeze-0
Main message:
When clinical data is coded with LOINC, health IT
applications can understand and interact with it for
the benefit of many in the health ecosystem.