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What macromolecules are present in a cell? Carbohydrates, Lipids, Proteins, and Nucleic Acids
Each class exhibits unique emergent properties. Emergent properties are properties that are found
in the macromolecule chains that are not found in the individual molecule. Three of the four classes
of macromolecules (excluding lipids) form polymers. The repeating units and building blocks of
Carbohydrates: serve as both fuel for the cells and building material. Sugars range from three
to seven carbons in length. Triose, pentose, and hexose sugars are the most common. The spatial
arrangement and position around an asymmetric carbon give 2 sugars completely different tastes and
properties.
● Sugar molecules have carbon skeletons which can fuse with amino acids and fatty acids
● Glucose that is not immediately utilized by the cell can be used to become a polysaccharide
reaction
Polysaccharides:
● Storage polysaccharides in plants are starches (a polymer of glucose molecules) and are
contained in plastids. The plant can synthesize starch to stockpile extra glucose.
● Potatoes, grains, wheat, corn, and rice are good sources of starch
Stored Polysaccharides:
● Glycogen is present in muscle and liver cells and hydrolyzed when demand for sugar increases
● The body needs sugars for fuel and that is why low carbohydrate diets are inadvisable
Structural Polysaccharides:
● Cellulose is a starch in the beta configuration. The beta configuration of cellulose makes it so
that every other beta glucose monomer is upside down with respect to its neighbors
● Starch is in the alpha configuration. The molecules are in a straight configuration each glucose
Critical Thinking:
1: A dehydration reaction joins 2 molecules to form maltose. The formula for glucose is C6H12O6.
2: What would happen if a cow were given antibiotics that killed all the prokaryotes in its
stomach?
The cow would not be able to absorb the nutrients from the cellulose in its rumen. It would become
severely malnourished. The rumen bacteria are responsible for breaking down the high fiber diet of the
cow into usable molecules. If these essential bacteria were killed the cow would lose weight and would
Fats: The hydrocarbon chains of fats are similar in form to benzene molecules and equally rich in
energy
● Fats are not polymers
● Fats do not mix with water. Water molecules hydrogen bond to one another excluding the fats
● Three fatty acid molecules join to a glycerol by an ester linkage which is a bond between a
Saturated Fats:
Unsaturated Fats:
● These kinks prevent the monomers from binding tightly to each other
Trans Fats:
● Trans Fats are unsaturated fats that have been converted to saturated fats by adding hydrogen
● Trans Fats contain trans double bonds. Ex: Peanut butter and margarine
● Trans Fats are even more harmful to one’s health than saturated fats
Phospholipids:
● Make up cell membranes
● The hydrocarbon hydrophobic tail and the hydrophilic phosphate group head
● The hydrophilic head has an affinity to water and the bilayers shield the hydrophobic portions
Steroids:
Proteins: proteins are versatile and are the most structurally sophisticated molecules known.
Proteins are:
transport, cellular communication, movement, and for defense against foreign substances
Amino acids can join through a dehydration reaction. The resulting covalent bond is called a peptide
bond.
● Amino acids have an N Terminus and a C Terminus. The N terminus is the amino terminus and
the C terminus is the carboxyl terminus hence the name amino acid
● A polypeptide is not the equivalent of a protein, even if the protein is comprised of only one
polypeptide. The polypeptide must be twisted, folded, and coiled into a molecule of a unique
Primary Protein Structure: consists of a sequence which is ordered like letters in a very long word.
The sequence is determined by genetic information. Ex: Transthyretin. The primary protein structure
polypeptide backbone. The oxygen and nitrogen are electronegative. Individually the hydrogen bonds
are weak but together (over the long region of the polypeptide chain) they can support the protein’s
shape
Alpha helix: Hydrogen bonding between every 4th amino acid. Ex: Hair incorporates alpha helix
secondary structure
Beta Helix: A spider’s web contains strong silk proteins. The large quantity of hydrogen bonds makes
the spider’s web fiber stronger than a steel strand of the same weight. The shape is maintained despite
wind, rain, and insect’s touch while still maintaining its strength
Tertiary Protein Structure: 4 types of bonds mediate tertiary interactions: hydrogen bonds, ionic
Quaternary Protein Structure: The same bonds exist in tertiary and quaternary protein structures
except in quaternary structures the bond exists between atoms in different polypeptide chains while
in tertiary structures the bonds are between atoms in the same polypeptide chain
A folded protein exists at a lower energy level than an unfolded protein (can be made to unfold in vitro
such as in a test tube) You can denature a protein by greatly raising the temperature. Proteins can go
through denaturing and renaturing process indefinitely. If the denaturant is removed, the protein will
Nucleic Acid: Form the genetic material and are proteins that are primarily responsible for biological
functions. DNA is a repository of genetic information. Nucleic acids are polymers of nucleotide
The molecule has directionality. The N-Terminus is different from the C-Prime end (The 5’ end is
different from the 3’ end) The 5’ end has a free phosphate group (free meaning that it is not attached to
At the 3’ end the free Hydroxyl (OH) group is attached to the 3’ Carbon
DNA:
● Nucleotides: G C A T
● Double Stranded
● Direction of first strange is anti parallel (or opposite in direction) to the second strange
RNA:
● GCAU
● Single stranded
What class of organic macromolecule is most directly responsible for the characteristics of an
organism? Proteins. However proteins do not get passed onto offspring. DNA gets expressed. DNA is
How do nucleic acids account for an organisms characteristics? Proteins acts as enzymes
ATP: ATP has the nitrogenous base adenosine and three phosphates. The terminal phosphate acts as a
high energy bond which can be cleaved and hydrolyzed to release energy
The DNA sequence determines the amino acid sequence. The DNA sequence also determines the
protein sequence. DNA is transcribed by transcription and becomes an RNA sequence and is then
The double stranded DNA molecule has complementary base pairs. One is the coding strand or the
non-template strand which represents the code created by the RNA except with uracils in place of
the thymines. The other strand is the template strand which acts as a template for the synthesis of the
RNA template strand. RNA that is transcribed is complementary to the template strand. Within a long
DNA and RNA are universal across different species. Insulin for example can be made for diabetics by
4 different RNA bases must account for 20 different amino acids in a polypeptide chain
There are a total of 64 possible codons. 61 code for 20 amino acids and three codons code for
termination of the polypeptide chain (stop codons)
There are more combinations than amino acids. Amino acids that are represented by more than one
codon are known as degenerates. AUG is a start codon (most codons begin with this) Leucine is very
degenerate because it has six different codons. Three different amino acids signal the end of the nucleic
● The monomers are connected in a specific condensation reaction called a dehydration reaction
● This reaction is called a dehydration reaction because water is lost in the process and a new
bond is formed
● The water molecule is lost from the (-H) and (-OH) group
● This reaction can be repeated as monomers are added to the chain linking themselves
What is hydrolysis?
● Ex: A good example of hydrolysis is the reaction that occurs within our own bodies as we
digest food. Food is made up of large polymers. The nutrients from these large molecules
are unable to pass into our cells unless they are broken down into smaller and more simple
monomers. In the digestive tract, enzymes attack the polymers to speed up hydrolysis. Finally,
the nutrients pass into the bloodstream, and permeate into all of the body’s cells.
● The cycle continues when cells use dehydration reactions to assemble the polymers into new
polymers which fit the needs of the cells of the body.
● Proteins are made up of 20 amino acids in chains that are hundred of amino acids in length.
Concept Check:
1) How many molecules of water are needed to completely hydrolyze a polymer that is ten monomers
in length? Nine molecules of water are needed to hydrolyze a polymer that is ten monomers in length
2) Suppose you eat a serving of green beans. What reactions must your body undergo for the amino
acid polymers in the protein of the green beans to be converted into proteins and nutrients in your
body? The polymers in the green beans must first undergo hydrolysis. The enzyme within the digestive
track must attack the polymers to speed up hydrolysis. The monomers can then be distributed into the
body cells.