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Se descargaron los pquetes para leer y escribir archivos en excel

install.packages("< Readxl >")

install.packages("< xlsx >")

Para su uso se instalaron las siguientes librerias

library("< Readxl >")

library("< xlsx >")

Como se tiene un archivo de tipo .ODS


se instalo el paquete : readODS
además del paquete: libxml2-dev

readr :: type_

readODS::read_ods(path = "Valores_R_&_LlG_Ver1.2.ods",sheet = "M271",col_names = TRUE,col_types = NULL,na="",skip


= 0,formula_as_formula = FALSE,range = NULL)

Con estas instrucciones generó el siguietne archivo:


1 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
2 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA> <NA> <NA> SCALA Asimetric Unit <NA>
4 <NA> <NA> <NA> <NA> <NA> MOSFLM <NA> <NA> Rmerge
5 <NA> <NA> <NA> #Fram A #Proy Mosflm #Proy Scala 390 Overall
6 <NA> <NA> m271 30 1.6 Moflm-240 Frames 206 390 0.155
7 <NA> <NA> m271 30 1.65 Moflm-240 Frames 207 390 0.151
8 <NA> <NA> m271 30 1.7 Moflm-240 Frames 185 390 0.144
9 <NA> <NA> m271 30 1.75 Moflm-240 Frames 186 390 0.137
10 <NA> <NA> m271 30 1.8 Moflm-240 Frames 189 390 0.129
11 <NA> <NA> m271 30 1.85 Moflm-240 Frames 188 390 0.122
12 <NA> <NA> m271 30 1.9 Moflm-240 Frames 190 390 0.115
13 <NA> <NA> m271 30 1.95 Moflm-240 Frames 191 390 0.108
14 <NA> <NA> m271 30 2 Moflm-240 Frames 192 390 0.103
15 <NA> <NA> <NA> <NA> <NA> <NA> <NA> 390 <NA>
16 <NA> <NA> m271 60 1.6 Moflm-240 Frames 208 390 0.17
17 <NA> <NA> m271 60 1.65 Moflm-240 Frames 209 390 0.164
18 <NA> <NA> m271 60 1.7 Moflm-240 Frames 183 390 0.156
19 <NA> <NA> m271 60 1.75 Moflm-240 Frames 176 390 0.147
20 <NA> <NA> m271 60 1.8 Moflm-240 Frames 184 390 0.138
21 <NA> <NA> m271 60 1.85 Moflm-240 Frames 178 390 0.085
22 <NA> <NA> m271 60 1.9 Moflm-240 Frames 182 390 0.123
23 <NA> <NA> m271 60 1.95 Moflm-240 Frames 180 390 0.116
24 <NA> <NA> m271 60 2 Moflm-240 Frames 181 390 0.109
25 <NA> <NA> <NA> <NA> <NA> <NA> <NA> 390 <NA>
26 <NA> <NA> m271 120 1.6 Moflm-240 Frames 210 390 0.143
27 <NA> <NA> m271 120 1.65 Moflm-240 Frames 211 390 0.138
28 <NA> <NA> m271 120 1.7 Moflm-240 Frames 168 390 0.131
1 <NA> <NA> <NA> <NA> <NA> <NA>
2 <NA> <NA> <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA> <NA> <NA>
4 Rmeas (all I+ & I-) Rpim (all I+ & I-) Mean((I)/sd(I)) <NA> CC(1/2) <NA>
5 OuterShell Overall OuterShell Overall OuterShell Overall
6 1.737 0.196 2.306 0.116 1.5 4
7 1.388 0.19 1.784 0.113 1.108 4.3
8 1.111 0.181 1.431 0.107 0.889 4.7
9 0.906 0.172 1.166 0.101 0.722 5.1
10 0.742 0.161 0.951 0.095 0.584 5.4
11 0.621 0.152 0.793 0.089 0.484 5.8
12 0.484 0.143 0.615 0.083 0.372 6.4
13 0.432 0.135 0.549 0.078 0.332 6.8
14 0.389 0.128 0.493 0.074 0.298 7.2
15 <NA> <NA> <NA> <NA> <NA> <NA>
16 1.594 0.199 2.043 0.1 1.255 5.6
17 1.381 0.191 1.693 0.094 0.958 6
18 1.152 0.18 1.372 0.088 0.727 6.6
19 0.924 0.17 1.084 0.082 0.55 7.2
20 0.759 0.159 0.886 0.077 0.445 7.7
21 0.706 0.096 0.812 0.044 0.386 12.3
22 0.517 0.141 0.601 0.068 0.298 8.8
23 0.46 0.133 0.534 0.064 0.264 9.4
24 0.401 0.126 0.467 0.06 0.231 10.1
25 <NA> <NA> <NA> <NA> <NA> <NA>
26 1.232 0.162 1.466 0.074 0.782 8.4
27 1.061 0.155 1.226 0.07 0.606 9
28 0.879 0.146 0.996 0.065 0.461 9.7

1 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>


2 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
4 Completeness <NA> Multiplicity <NA> PHASER <NA> Final <NA> START
5 OuterShell Overall OuterShell Overall OuterShell Overall OuterShell #Proy Phas LLG:
6 0.5 0.991 0.153 57.2 53.9 2 1.5 224 9019
7 0.6 0.991 0.196 57.7 58.4 2 1.7 229 8913
8 0.8 0.991 0.261 57.7 60.9 2.1 1.8 231 8732
9 1 0.992 0.365 57.5 62.1 2.1 1.9 233 8508
10 1.2 0.992 0.485 57.1 61.9 2.1 2 235 8183
11 1.5 0.992 0.566 56.7 61.4 2.1 2 237 7812
12 1.9 0.993 0.69 56.3 60.8 2.1 2 239 7401
13 2.2 0.993 0.752 55.9 60.6 2.1 2 241 7002
14 2.5 0.993 0.794 55.5 59.8 2.1 2 243 6549
15 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
16 0.6 0.992 0.165 64.1 67.1 3.5 2.4 245 11097
17 0.8 0.992 0.242 63.9 68.9 3.7 2.9 247 10903
18 1 0.992 0.376 63.4 68.4 3.8 3.3 249 10617
19 1.3 0.993 0.54 63 67.9 3.8 3.6 251 10233
20 1.7 0.993 0.648 62.5 67.4 3.9 3.6 253 9771
21 1.9 0.996 0.726 8.7 5.1 4.4 3.8 255 1503
22 2.6 0.994 0.78 61.6 66.2 3.9 3.7 257 8648
23 2.9 0.994 0.812 61.2 66.2 3.9 3.7 259 8124
24 3.4 0.994 0.846 60.8 65.4 3.9 3.7 261 7534
25 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
26 1 0.995 0.28 99.6 97.5 4.6 3.3 263 19741
27 1.4 0.995 0.41 100 100 4.7 4 265 19157
28 1.8 0.995 0.568 100 100 4.8 4.5 267 18408

1 <NA> <NA> <NA>


2 <NA> <NA> <NA>
3 REFMAC PHENIX <NA>
4 <NA> FINAL <NA>
5 #Proy Refmac R VALUE (WORKING SET) : FREE R VALUE:
6 225 0.2834 0.28937
7 230 0.27911 0.27941
8 232 0.2737 0.30193
9 234 0.27272 0.26925
10 236 0.27031 0.2662
11 238 0.26719 0.26724
12 240 0.26403 0.25681
13 242 0.26381 0.24107
14 244 0.26188 0.26133
15 <NA> <NA> <NA>
16 246 0.27659 0.2874
17 248 0.27242 0.27501
18 250 0.26736 0.29677
19 252 0.26574 0.26422
20 254 0.26323 0.26238
21 256 0.26777 0.30089
22 258 0.2591 0.25261
23 260 0.25851 0.24182
24 262 0.25729 0.26374
25 <NA> <NA> <NA>
26 264 0.26935 0.27752
27 266 0.26579 0.26387
28 268 0.26141 0.2832

1 <NA> <NA> <NA> <NA>


2 <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA>
4 <NA> <NA> <NA> <NA>
5 Comentarios R WORK : R FREE: ΔR
6 V1 falto en nombre de archivo 0.2782 0.2818 <NA>
7 aa 179 0.2748 0.2738 <NA>
8 Aa 155 ARG 0.2682 0.2948 <NA>
9 <NA> 0.2657 0.26 <NA>
10 Estructuras sin densidad 0.2626 0.2654 <NA>
11 <NA> 0.2598 0.2571 <NA>
12 156,conformacional 0.2567 0.2466 <NA>
13 155,156, Densidad 0.2566 0.2307 <NA>
14 179, bimolecular 0.254 0.2481 <NA>
15 <NA> <NA> <NA> <NA>
16 156, doble conformacion 0.2697 0.2777 <NA>
17 Se ve mas gordita la nube de densidad,154 una manchita roja 0.2663 0.2671 <NA>
18 Aa 179 se ve doble estructura 0.2603 0.2908 <NA>
19 Aa 156.155 sin densidad 0.2577 0.2548 <NA>
20 156 doble conformación 0.2544 0.2594 <NA>
21 Se ven nubes de densidad verde y roja muy alargadas y grandes 0.2717 0.3092 <NA>
22 155,156 sin densidad 0.2509 0.2434 <NA>
23 155.. sin densidad 0.2505 0.2313 <NA>
24 155… 0.2491 0.2527 <NA>
25 <NA> <NA> <NA> <NA>
26 155 .. le falta densidad 0.2613 0.2679 <NA>
27 155 .. le falta densidad 0.2586 0.2543 <NA>
28 155 .. le falta densidad 0.2533 0.2772 <NA>

1 <NA> <NA> <NA>


2 <NA> <NA> <NA>
3 <NA> <NA> <NA>
4 <NA> <NA> <NA>
5 R WORK : R FREE: ΔR
6 0.2539 0.3066 <NA>
7 0.2496 0.2993 <NA>
8 0.2463 0.3141 <NA>
9 0.24 0.2895 <NA>
10 0.233 0.2983 <NA>
11 0.2331 0.2954 <NA>
12 0.2278 0.2842 <NA>
13 0.2234 0.2837 <NA>
14 0.2204 0.2885 <NA>
15 <NA> <NA> <NA>
16 0.2507 0.3002 <NA>
17 0.2469 0.2903 <NA>
18 0.2414 0.3088 <NA>
19 0.2351 0.2821 <NA>
20 0.2324 0.2933 <NA>
21 0.1903 0.3969 <NA>
22 0.2256 0.2737 <NA>
23 0.2231 0.278 <NA>
24 0.2195 0.289 <NA>
25 <NA> <NA> <NA>
26 0.2496 0.2822 <NA>
27 0.2459 0.2681 <NA>
28 0.2401 0.2789 <NA>

1 <NA>
2 <NA>
3 <NA>
4 <NA>
5 COMENTARIO
6 <NA>
7 <NA>
8 Aa 156 ASP, no se ve la nube|188 aa GLU doble molecula
9 Aa 156 ASP, no tiene nube
10 “”
11 154,155.156 falta densidad
12 147,153,155,156, 159, Sin densidad
13 145, falta densidad
14 falta densidad 156
15 <NA>
16 155,156, Densidad
17 155,156 sin densidad
18 155,156 sin densidad
19 155,156,168,169,171 sin densidad
20 146, 159, 168, 169 sin densidad
21 143 falta densidad en varios
22 <NA>
23 148,
24 Varios aa no presentan toda la densidad electronica.
25 <NA>
26 <NA>
27 <NA>
28 <NA>
[ reached getOption("max.print") -- omitted 16 rows ]
> readODS::read_ods(path = "Valores_R_&_LlG_Ver1.2.ods",sheet = "M271",col_names = TRUE,col_types =
NULL,na="",skip = 0,formula_as_formula = FALSE,range = NULL)
Parsed with column specification:
cols(
.default = col_character()
)
See spec(...) for full column specifications.

1 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>


2 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA> <NA> <NA> SCALA Asimetric Unit <NA>
4 <NA> <NA> <NA> <NA> <NA> MOSFLM <NA> <NA> Rmerge
5 <NA> <NA> <NA> #Fram A #Proy Mosflm #Proy Scala 390 Overall
6 <NA> <NA> m271 30 1.6 Moflm-240 Frames 206 390 0.155
7 <NA> <NA> m271 30 1.65 Moflm-240 Frames 207 390 0.151
8 <NA> <NA> m271 30 1.7 Moflm-240 Frames 185 390 0.144
9 <NA> <NA> m271 30 1.75 Moflm-240 Frames 186 390 0.137
10 <NA> <NA> m271 30 1.8 Moflm-240 Frames 189 390 0.129
11 <NA> <NA> m271 30 1.85 Moflm-240 Frames 188 390 0.122
12 <NA> <NA> m271 30 1.9 Moflm-240 Frames 190 390 0.115
13 <NA> <NA> m271 30 1.95 Moflm-240 Frames 191 390 0.108
14 <NA> <NA> m271 30 2 Moflm-240 Frames 192 390 0.103
15 <NA> <NA> <NA> <NA> <NA> <NA> <NA> 390 <NA>
16 <NA> <NA> m271 60 1.6 Moflm-240 Frames 208 390 0.17
17 <NA> <NA> m271 60 1.65 Moflm-240 Frames 209 390 0.164
18 <NA> <NA> m271 60 1.7 Moflm-240 Frames 183 390 0.156
19 <NA> <NA> m271 60 1.75 Moflm-240 Frames 176 390 0.147
20 <NA> <NA> m271 60 1.8 Moflm-240 Frames 184 390 0.138
21 <NA> <NA> m271 60 1.85 Moflm-240 Frames 178 390 0.085
22 <NA> <NA> m271 60 1.9 Moflm-240 Frames 182 390 0.123
23 <NA> <NA> m271 60 1.95 Moflm-240 Frames 180 390 0.116
24 <NA> <NA> m271 60 2 Moflm-240 Frames 181 390 0.109
25 <NA> <NA> <NA> <NA> <NA> <NA> <NA> 390 <NA>
26 <NA> <NA> m271 120 1.6 Moflm-240 Frames 210 390 0.143
27 <NA> <NA> m271 120 1.65 Moflm-240 Frames 211 390 0.138
28 <NA> <NA> m271 120 1.7 Moflm-240 Frames 168 390 0.131

1 <NA> <NA> <NA> <NA> <NA> <NA>


2 <NA> <NA> <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA> <NA> <NA>
4 Rmeas (all I+ & I-) Rpim (all I+ & I-) Mean((I)/sd(I)) <NA> CC(1/2) <NA>
5 OuterShell Overall OuterShell Overall OuterShell Overall
6 1.737 0.196 2.306 0.116 1.5 4
7 1.388 0.19 1.784 0.113 1.108 4.3
8 1.111 0.181 1.431 0.107 0.889 4.7
9 0.906 0.172 1.166 0.101 0.722 5.1
10 0.742 0.161 0.951 0.095 0.584 5.4
11 0.621 0.152 0.793 0.089 0.484 5.8
12 0.484 0.143 0.615 0.083 0.372 6.4
13 0.432 0.135 0.549 0.078 0.332 6.8
14 0.389 0.128 0.493 0.074 0.298 7.2
15 <NA> <NA> <NA> <NA> <NA> <NA>
16 1.594 0.199 2.043 0.1 1.255 5.6
17 1.381 0.191 1.693 0.094 0.958 6
18 1.152 0.18 1.372 0.088 0.727 6.6
19 0.924 0.17 1.084 0.082 0.55 7.2
20 0.759 0.159 0.886 0.077 0.445 7.7
21 0.706 0.096 0.812 0.044 0.386 12.3
22 0.517 0.141 0.601 0.068 0.298 8.8
23 0.46 0.133 0.534 0.064 0.264 9.4
24 0.401 0.126 0.467 0.06 0.231 10.1
25 <NA> <NA> <NA> <NA> <NA> <NA>
26 1.232 0.162 1.466 0.074 0.782 8.4
27 1.061 0.155 1.226 0.07 0.606 9
28 0.879 0.146 0.996 0.065 0.461 9.7

1 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>


2 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
4 Completeness <NA> Multiplicity <NA> PHASER <NA> Final <NA> START
5 OuterShell Overall OuterShell Overall OuterShell Overall OuterShell #Proy Phas LLG:
6 0.5 0.991 0.153 57.2 53.9 2 1.5 224 9019
7 0.6 0.991 0.196 57.7 58.4 2 1.7 229 8913
8 0.8 0.991 0.261 57.7 60.9 2.1 1.8 231 8732
9 1 0.992 0.365 57.5 62.1 2.1 1.9 233 8508
10 1.2 0.992 0.485 57.1 61.9 2.1 2 235 8183
11 1.5 0.992 0.566 56.7 61.4 2.1 2 237 7812
12 1.9 0.993 0.69 56.3 60.8 2.1 2 239 7401
13 2.2 0.993 0.752 55.9 60.6 2.1 2 241 7002
14 2.5 0.993 0.794 55.5 59.8 2.1 2 243 6549
15 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
16 0.6 0.992 0.165 64.1 67.1 3.5 2.4 245 11097
17 0.8 0.992 0.242 63.9 68.9 3.7 2.9 247 10903
18 1 0.992 0.376 63.4 68.4 3.8 3.3 249 10617
19 1.3 0.993 0.54 63 67.9 3.8 3.6 251 10233
20 1.7 0.993 0.648 62.5 67.4 3.9 3.6 253 9771
21 1.9 0.996 0.726 8.7 5.1 4.4 3.8 255 1503
22 2.6 0.994 0.78 61.6 66.2 3.9 3.7 257 8648
23 2.9 0.994 0.812 61.2 66.2 3.9 3.7 259 8124
24 3.4 0.994 0.846 60.8 65.4 3.9 3.7 261 7534
25 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA>
26 1 0.995 0.28 99.6 97.5 4.6 3.3 263 19741
27 1.4 0.995 0.41 100 100 4.7 4 265 19157
28 1.8 0.995 0.568 100 100 4.8 4.5 267 18408

1 <NA> <NA> <NA>


2 <NA> <NA> <NA>
3 REFMAC PHENIX <NA>
4 <NA> FINAL <NA>
5 #Proy Refmac R VALUE (WORKING SET) : FREE R VALUE:
6 225 0.2834 0.28937
7 230 0.27911 0.27941
8 232 0.2737 0.30193
9 234 0.27272 0.26925
10 236 0.27031 0.2662
11 238 0.26719 0.26724
12 240 0.26403 0.25681
13 242 0.26381 0.24107
14 244 0.26188 0.26133
15 <NA> <NA> <NA>
16 246 0.27659 0.2874
17 248 0.27242 0.27501
18 250 0.26736 0.29677
19 252 0.26574 0.26422
20 254 0.26323 0.26238
21 256 0.26777 0.30089
22 258 0.2591 0.25261
23 260 0.25851 0.24182
24 262 0.25729 0.26374
25 <NA> <NA> <NA>
26 264 0.26935 0.27752
27 266 0.26579 0.26387
28 268 0.26141 0.2832

1 <NA> <NA> <NA> <NA>


2 <NA> <NA> <NA> <NA>
3 <NA> <NA> <NA> <NA>
4 <NA> <NA> <NA> <NA>
5 Comentarios R WORK : R FREE: ΔR
6 V1 falto en nombre de archivo 0.2782 0.2818 <NA>
7 aa 179 0.2748 0.2738 <NA>
8 Aa 155 ARG 0.2682 0.2948 <NA>
9 <NA> 0.2657 0.26 <NA>
10 Estructuras sin densidad 0.2626 0.2654 <NA>
11 <NA> 0.2598 0.2571 <NA>
12 156,conformacional 0.2567 0.2466 <NA>
13 155,156, Densidad 0.2566 0.2307 <NA>
14 179, bimolecular 0.254 0.2481 <NA>
15 <NA> <NA> <NA> <NA>
16 156, doble conformacion 0.2697 0.2777 <NA>
17 Se ve mas gordita la nube de densidad,154 una manchita roja 0.2663 0.2671 <NA>
18 Aa 179 se ve doble estructura 0.2603 0.2908 <NA>
19 Aa 156.155 sin densidad 0.2577 0.2548 <NA>
20 156 doble conformación 0.2544 0.2594 <NA>
21 Se ven nubes de densidad verde y roja muy alargadas y grandes 0.2717 0.3092 <NA>
22 155,156 sin densidad 0.2509 0.2434 <NA>
23 155.. sin densidad 0.2505 0.2313 <NA>
24 155… 0.2491 0.2527 <NA>
25 <NA> <NA> <NA> <NA>
26 155 .. le falta densidad 0.2613 0.2679 <NA>
27 155 .. le falta densidad 0.2586 0.2543 <NA>
28 155 .. le falta densidad 0.2533 0.2772 <NA>

1 <NA> <NA> <NA>


2 <NA> <NA> <NA>
3 <NA> <NA> <NA>
4 <NA> <NA> <NA>
5 R WORK : R FREE: ΔR
6 0.2539 0.3066 <NA>
7 0.2496 0.2993 <NA>
8 0.2463 0.3141 <NA>
9 0.24 0.2895 <NA>
10 0.233 0.2983 <NA>
11 0.2331 0.2954 <NA>
12 0.2278 0.2842 <NA>
13 0.2234 0.2837 <NA>
14 0.2204 0.2885 <NA>
15 <NA> <NA> <NA>
16 0.2507 0.3002 <NA>
17 0.2469 0.2903 <NA>
18 0.2414 0.3088 <NA>
19 0.2351 0.2821 <NA>
20 0.2324 0.2933 <NA>
21 0.1903 0.3969 <NA>
22 0.2256 0.2737 <NA>
23 0.2231 0.278 <NA>
24 0.2195 0.289 <NA>
25 <NA> <NA> <NA>
26 0.2496 0.2822 <NA>
27 0.2459 0.2681 <NA>
28 0.2401 0.2789 <NA>

1 <NA>
2 <NA>
3 <NA>
4 <NA>
5 COMENTARIO
6 <NA>
7 <NA>
8 Aa 156 ASP, no se ve la nube|188 aa GLU doble molecula
9 Aa 156 ASP, no tiene nube
10 “”
11 154,155.156 falta densidad
12 147,153,155,156, 159, Sin densidad
13 145, falta densidad
14 falta densidad 156
15 <NA>
16 155,156, Densidad
17 155,156 sin densidad
18 155,156 sin densidad
19 155,156,168,169,171 sin densidad
20 146, 159, 168, 169 sin densidad
21 143 falta densidad en varios
22 <NA>
23 148,
24 Varios aa no presentan toda la densidad electronica.
25 <NA>
26 <NA>
27 <NA>
28 <NA>
camino
ruta al archivo ods.
hoja
hoja para leer. Ya sea una cadena (el nombre de la hoja) o un número de hoja entero. El valor
predeterminado es 1.
col_names
indicando si el archivo contiene los nombres de las variables como su primera línea.
tipos de col
O NULL para adivinar desde la hoja de cálculo o consulte readr :: type_convert para especificar la
especificación de cols. NA devolverá un marco de datos con todas las columnas como "caracteres".
n /A
Valor que falta. Por defecto, read_ods convierte las celdas en blanco en datos faltantes.
omitir
el número de líneas del archivo de datos a omitir antes de comenzar a leer datos.
formula_as_formula
un interruptor para mostrar fórmulas como fórmulas "SUM (A1: A3)" o como el valor resultante "3" ...
o "8" ..
distancia
selección de rectángulo usando el rango de celdas de Excel, como range = "D12: F15" o range =
"R1C12: R6C15". Procesamiento de rango de celda es manejado por el paquete de cellranger.
expediente
solo para read.ods, ruta al archivo ods.
formulaAsFormula
solo para read.ods, un interruptor para mostrar fórmulas como fórmulas "SUM (A1: A3)" o como el
valor resultante "3" ... o "8" ..

Información del Traductor de GoogleComunidadMóvil


> readODS::read.ods("Valores_R_&_LlG_Ver1.3.ods","M271",FALSE)
AB C D E F G H I J K
1 SCALA SCALA SCALA SCALA
2 SCALA SCALA SCALA SCALA Rmerge Rmerge Rmeas (all I+ & I-) Rmeas (all I+ & I-)
3 Proteina #Fram A #Proy Scala Asimetric Unit Overall OuterShell Overall OuterShell
4 m271 30 1.6 206 390 0.155 1.737 0.196 2.306
5 m271 30 1.65 207 390 0.151 1.388 0.19 1.784
6 m271 30 1.7 185 390 0.144 1.111 0.181 1.431
7 m271 30 1.75 186 390 0.137 0.906 0.172 1.166
8 m271 30 1.8 189 390 0.129 0.742 0.161 0.951
9 m271 30 1.85 188 390 0.122 0.621 0.152 0.793
10 m271 30 1.9 190 390 0.115 0.484 0.143 0.615
11 m271 30 1.95 191 390 0.108 0.432 0.135 0.549
12 m271 30 2 192 390 0.103 0.389 0.128 0.493
13
14
15
16 Proteina SCALA SCALA SCALA SCALA SCALA SCALA SCALA SCALA
17 Asimetric Unit Rmerge Rmeas (all I+ & I-) Rpim (all I+ & I-) Mean((I)/sd(I))
18 #Fram A #Proy Scala 390 Overall OuterShell Overall OuterShell
19 m271 60 1.6 208 390 0.17 1.594 0.199 2.043
20 m271 60 1.65 209 390 0.164 1.381 0.191 1.693
21 m271 60 1.7 183 390 0.156 1.152 0.18 1.372
22 m271 60 1.75 176 390 0.147 0.924 0.17 1.084
23 m271 60 1.8 184 390 0.138 0.759 0.159 0.886
24 m271 60 1.85 178 390 0.085 0.706 0.096 0.812
25 m271 60 1.9 182 390 0.123 0.517 0.141 0.601
26 m271 60 1.95 180 390 0.116 0.46 0.133 0.534
27 m271 60 2 181 390 0.109 0.401 0.126 0.467
28
29
30
L M N O P Q R S T
1 SCALA SCALA SCALA SCALA SCALA SCALA SCALA SCALA SCALA
2 Rpim (all I+ & I-) Rpim (all I+ & I-) Mean((I)/sd(I)) Mean((I)/sd(I)) CC(1/2) CC(1/2) Completeness Completeness Multiplicity
3 Overall OuterShell Overall OuterShell Overall OuterShell Overall OuterShell Overall
4 0.116 1.5 4 0.5 0.991 0.153 57.2 53.9 2
5 0.113 1.108 4.3 0.6 0.991 0.196 57.7 58.4 2
6 0.107 0.889 4.7 0.8 0.991 0.261 57.7 60.9 2.1
7 0.101 0.722 5.1 1 0.992 0.365 57.5 62.1 2.1
8 0.095 0.584 5.4 1.2 0.992 0.485 57.1 61.9 2.1
9 0.089 0.484 5.8 1.5 0.992 0.566 56.7 61.4 2.1
10 0.083 0.372 6.4 1.9 0.993 0.69 56.3 60.8 2.1
11 0.078 0.332 6.8 2.2 0.993 0.752 55.9 60.6 2.1
12 0.074 0.298 7.2 2.5 0.993 0.794 55.5 59.8 2.1
13
14
15
16 SCALA SCALA SCALA SCALA SCALA SCALA SCALA SCALA SCALA
17 CC(1/2) Completeness Multiplicity PHASER
18 Overall OuterShell Overall OuterShell Overall OuterShell Overall OuterShell Overall
19 0.1 1.255 5.6 0.6 0.992 0.165 64.1 67.1 3.5
20 0.094 0.958 6 0.8 0.992 0.242 63.9 68.9 3.7
21 0.088 0.727 6.6 1 0.992 0.376 63.4 68.4 3.8
22 0.082 0.55 7.2 1.3 0.993 0.54 63 67.9 3.8
23 0.077 0.445 7.7 1.7 0.993 0.648 62.5 67.4 3.9
24 0.044 0.386 12.3 1.9 0.996 0.726 8.7 5.1 4.4
25 0.068 0.298 8.8 2.6 0.994 0.78 61.6 66.2 3.9
26 0.064 0.264 9.4 2.9 0.994 0.812 61.2 66.2 3.9
27 0.06 0.231 10.1 3.4 0.994 0.846 60.8 65.4 3.9
28
29
30
U V W X Y Z
1 SCALA REFMAC REFMAC
2 Multiplicity PHASER PHASER REFMAC Final Final
3 OuterShell #Proy Phas LLG: #Proy Refmac R VALUE (WORKING SET) : FREE R VALUE:
4 1.5 224 9019 225 0.2834 0.28937
5 1.7 229 8913 230 0.27911 0.27941
6 1.8 231 8732 232 0.2737 0.30193
7 1.9 233 8508 234 0.27272 0.26925
8 2 235 8183 236 0.27031 0.2662
9 2 237 7812 238 0.26719 0.26724
10 2 239 7401 240 0.26403 0.25681
11 2 241 7002 242 0.26381 0.24107
12 2 243 6549 244 0.26188 0.26133
13
14
15
16 SCALA REFMAC PHENIX
17 Final START FINAL
18 OuterShell #Proy Phas LLG: #Proy Refmac R VALUE (WORKING SET) : FREE R VALUE:
19 2.4 245 11097 246 0.27659 0.2874
20 2.9 247 10903 248 0.27242 0.27501
21 3.3 249 10617 250 0.26736 0.29677
22 3.6 251 10233 252 0.26574 0.26422
23 3.6 253 9771 254 0.26323 0.26238
24 3.8 255 1503 256 0.26777 0.30089
25 3.7 257 8648 258 0.2591 0.25261
26 3.7 259 8124 260 0.25851 0.24182
27 3.7 261 7534 262 0.25729 0.26374
28
29
30
AA AB AC AD AE AF
1 PHENIX PHENIX PHENIX PHENIX
2 REFMAC START START FINAL FINAL PHENIX
3 Comentarios R WORK : R FREE: R WORK : R FREE: ΔR(Rfree-Rwork)final
4 V1 falto en nombre de archivo 0.2782 0.2818 0.2539 0.3066 0.0527
5 aa 179 0.2748 0.2738 0.2496 0.2993 0.0497
6 Aa 155 ARG 0.2682 0.2948 0.2463 0.3141 0.0678
7 0.2657 0.26 0.24 0.2895 0.0495
8 Estructuras sin densidad 0.2626 0.2654 0.233 0.2983 0.0653
9 0.2598 0.2571 0.2331 0.2954 0.0623
10 156,conformacional 0.2567 0.2466 0.2278 0.2842 0.0564
11 155,156, Densidad 0.2566 0.2307 0.2234 0.2837 0.0603
12 179, bimolecular 0.254 0.2481 0.2204 0.2885 0.0681
13
14
15
16
17
18 Comentarios R WORK : R FREE: R WORK : R FREE: ΔR
19 156, doble conformacion 0.2697 0.2777 0.2507 0.3002 0.0495
20 Se ve mas gordita la nube de densidad,154 una manchita roja 0.2663 0.2671 0.2469 0.2903 0.0434
21 Aa 179 se ve doble estructura 0.2603 0.2908 0.2414 0.3088 0.0674
22 Aa 156.155 sin densidad 0.2577 0.2548 0.2351 0.2821 0.047
23 156 doble conformación 0.2544 0.2594 0.2324 0.2933 0.0609
24 Se ven nubes de densidad verde y roja muy alargadas y grandes 0.2717 0.3092 0.1903 0.3969 0.2066
25 155,156 sin densidad 0.2509 0.2434 0.2256 0.2737 0.0481
26 155.. sin densidad 0.2505 0.2313 0.2231 0.278 0.0549
27 155… 0.2491 0.2527 0.2195 0.289 0.0695
28
29
30
AG
1
2 PHENIX
3 COMENTARIO
4
5
6 Aa 156 ASP, no se ve la nube|188 aa GLU doble molecula
7 Aa 156 ASP, no tiene nube
8 “”
9 154,155.156 falta densidad
10 147,153,155,156, 159, Sin densidad
11 145, falta densidad
12 falta densidad 156
13
14
15
16
17
18 COMENTARIO
19 155,156, Densidad
20 155,156 sin densidad
21 155,156 sin densidad
22 155,156,168,169,171 sin densidad
23 146, 159, 168, 169 sin densidad
24 143 falta densidad en varios
25
26 148,
27 Varios aa no presentan toda la densidad electronica.
28
29
30
[ reached getOption("max.print") -- omitted 27 rows ]
>

https://cran.r-project.org/web/packages/readODS/readODS.pdf

> install.packages(readODS)
Error in install.packages : object 'readODS' not found
> install.packages("readODS")
> install.packages("libxml2-dev")
> setwd("C:/Users/gugol/Downloads")
> readODS::read.ods("Valores_R_&_LlG_Ver1.3.ods","M271",FALSE)

XXXXXXXXXXXXXXXXXXXXXXX

> install.packages("readODS")
> install.packages("libxml2-dev")

> setwd("C:/Users/gugol/Desktop/m271")
> tablaGralM271<-readODS::read.ods("Valores_R_&_LlG_Ver1.3.ods","M271",F
ALSE)
> tablaGralM271_df<-data.frame(tablaGralM271)

> colnames(tablaGralM271_df)<-c()
> colnames(tablaGralM271_df)
NULL
> nameTablaGralM271<-data.frame((tablaGralM271_df[2:3,3:31]))
> colnames(nameTablaGralM271)<-c()
> colnames(nameTablaGralM271)
NULL

> no.Frames.30_M271<-data.frame((tablaGralM271_df[4:12,3:31]))
> colnames(no.Frames.30_M271)<-c()
> colnames(no.Frames.30_M271)
> install.packages("csv")

Xxxxxxxxxxxxxxxxxxxxxxxxxxx

> install.packages("readODS")
> install.packages("libxml2-dev")
> setwd("C:/Users/gugol/Desktop/m271")
> tablaGralM271<-readODS::read.ods("Valores_R_&_LlG_Ver1.3.ods","M271"
,FALSE)
> no.Frames.30_M271<-data.frame((tablaGralM271_df[2:12,3:31]))
> no.Frames.30_M271
X3 X4 X5 X6 X7 X8
2 SCALA SCALA SCALA SCALA Rmerge
3 Proteina #Fram A #Proy Scala Asimetric Unit Overall
4 m271 30 1.6 206 390 0.155
5 m271 30 1.65 207 390 0.151
6 m271 30 1.7 185 390 0.144
7 m271 30 1.75 186 390 0.137
8 m271 30 1.8 189 390 0.129
9 m271 30 1.85 188 390 0.122
10 m271 30 1.9 190 390 0.115
11 m271 30 1.95 191 390 0.108
12 m271 30 2 192 390 0.103
X9 X10 X11
2 Rmerge Rmeas(all I+ & I-) Rmeas(all I+ & I-)
3 OuterShell Overall OuterShell
4 1.737 0.196 2.306
5 1.388 0.19 1.784
6 1.111 0.181 1.431
7 0.906 0.172 1.166
8 0.742 0.161 0.951
9 0.621 0.152 0.793
10 0.484 0.143 0.615
11 0.432 0.135 0.549
12 0.389 0.128 0.493
X12 X13 X14
2 Rpim(all I+ & I-) Rpim(all I+ & I-) Mean((I)/sd(I))
3 Overall OuterShell Overall
4 0.116 1.5 4
5 0.113 1.108 4.3
6 0.107 0.889 4.7
7 0.101 0.722 5.1
8 0.095 0.584 5.4
9 0.089 0.484 5.8
10 0.083 0.372 6.4
11 0.078 0.332 6.8
12 0.074 0.298 7.2
X15 X16 X17 X18 X19
2 Mean((I)/sd(I)) CC(1/2) CC(1/2) Completeness Completeness
3 OuterShell Overall OuterShell Overall OuterShell
4 0.5 0.991 0.153 57.2 53.9
5 0.6 0.991 0.196 57.7 58.4
6 0.8 0.991 0.261 57.7 60.9
7 1 0.992 0.365 57.5 62.1
8 1.2 0.992 0.485 57.1 61.9
9 1.5 0.992 0.566 56.7 61.4
10 1.9 0.993 0.69 56.3 60.8
11 2.2 0.993 0.752 55.9 60.6
12 2.5 0.993 0.794 55.5 59.8
X20 X21 X22 X23 X24
2 Multiplicity Multiplicity PHASER PHASER REFMAC
3 Overall OuterShell #Proy Phas LLG: #Proy Refmac
4 2 1.5 224 9019 225
5 2 1.7 229 8913 230
6 2.1 1.8 231 8732 232
7 2.1 1.9 233 8508 234
8 2.1 2 235 8183 236
9 2.1 2 237 7812 238
10 2.1 2 239 7401 240
11 2.1 2 241 7002 242
12 2.1 2 243 6549 244
X25 X26
2 Final Final
3 R VALUE (WORKING SET) : FREE R VALUE:
4 0.2834 0.28937
5 0.27911 0.27941
6 0.2737 0.30193
7 0.27272 0.26925
8 0.27031 0.2662
9 0.26719 0.26724
10 0.26403 0.25681
11 0.26381 0.24107
12 0.26188 0.26133
X27 X28 X29 X30 X31
2 REFMAC START START FINAL FINAL
3 Comentarios R WORK : R FREE: R WORK : R FREE:
4 V1 falto en nombre de archivo 0.2782 0.2818 0.2539 0.3066
5 aa 179 0.2748 0.2738 0.2496 0.2993
6 Aa 155 ARG 0.2682 0.2948 0.2463 0.3141
7 0.2657 0.26 0.24 0.2895
8 Estructuras sin densidad 0.2626 0.2654 0.233 0.2983
9 0.2598 0.2571 0.2331 0.2954
10 156,conformacional 0.2567 0.2466 0.2278 0.2842
11 155,156, Densidad 0.2566 0.2307 0.2234 0.2837
12 179, bimolecular 0.254 0.2481 0.2204 0.2885

> > colnames(no.Frames.30_M271)<-c()


> show(no.Frames.30_M271[1:2,])

2 SCALA SCALA SCALA SCALA Rmerge


3 Proteina #Fram A #Proy Scala Asimetric Unit Overall

2 Rmerge Rmeas(all I+ & I-) Rmeas(all I+ & I-)


3 OuterShell Overall OuterShell

2 Rpim(all I+ & I-) Rpim(all I+ & I-) Mean((I)/sd(I))


3 Overall OuterShell Overall

2 Mean((I)/sd(I)) CC(1/2) CC(1/2) Completeness Completeness


3 OuterShell Overall OuterShell Overall OuterShell

2 Multiplicity Multiplicity PHASER PHASER REFMAC


3 Overall OuterShell #Proy Phas LLG: #Proy Refmac

2 Final Final REFMAC START


3 R VALUE (WORKING SET) : FREE R VALUE: Comentarios R WORK :

2 START FINAL FINAL


3 R FREE: R WORK : R FREE:
> encabezado<-(no.Frames.30_M271[1:2,])
> encabezado

2 SCALA SCALA SCALA SCALA Rmerge


3 Proteina #Fram A #Proy Scala Asimetric Unit Overall

2 Rmerge Rmeas(all I+ & I-) Rmeas(all I+ & I-)


3 OuterShell Overall OuterShell

2 Rpim(all I+ & I-) Rpim(all I+ & I-) Mean((I)/sd(I))


3 Overall OuterShell Overall

2 Mean((I)/sd(I)) CC(1/2) CC(1/2) Completeness Completeness


3 OuterShell Overall OuterShell Overall OuterShell

2 Multiplicity Multiplicity PHASER PHASER REFMAC


3 Overall OuterShell #Proy Phas LLG: #Proy Refmac

2 Final Final REFMAC START


3 R VALUE (WORKING SET) : FREE R VALUE: Comentarios R WORK :

2 START FINAL FINAL


3 R FREE: R WORK : R FREE:
> colnames(no.Frames.30_M271)<-encabezado
> colnames(no.Frames.30_M271)
[1] "c(\"\", \"Proteina\")" "c(\"SCALA\", \"#Fram\"
)" "c(\"SCALA\", \"A\")"
[4] "c(\"SCALA\", \"#Proy Scala\")" "c(\"SCALA\", \"Asimetr
ic Unit\")" "c(\"Rmerge\", \"Overall\")"
[7] "c(\"Rmerge\", \"OuterShell\")" "c(\"Rmeas(all I+ & I-)
\", \"Overall\")" "c(\"Rmeas(all I+ & I-)\", \"OuterShell\")"
[10] "c(\"Rpim(all I+ & I-)\", \"Overall\")" "c(\"Rpim(all I+ & I-)\
", \"OuterShell\")" "c(\"Mean((I)/sd(I))\", \"Overall\")"
[13] "c(\"Mean((I)/sd(I))\", \"OuterShell\")" "c(\"CC(1/2)\", \"Overa
ll\")" "c(\"CC(1/2)\", \"OuterShell\")"
[16] "c(\"Completeness\", \"Overall\")" "c(\"Completeness\", \"
OuterShell\")" "c(\"Multiplicity\", \"Overall\")"
[19] "c(\"Multiplicity\", \"OuterShell\")" "c(\"PHASER\", \"#Proy
Phas\")" "c(\"PHASER\", \"LLG:\")"
[22] "c(\"REFMAC\", \"#Proy Refmac\")" "c(\"Final\", \"R VALUE
(WORKING SET) :\")" "c(\"Final\", \"FREE R VALUE:\")"
[25] "c(\"REFMAC\", \"Comentarios\")" "c(\"START\", \"R WORK
:\")" "c(\"START\", \"R FREE:\")"
[28] "c(\"FINAL\", \"R WORK :\")" "c(\"FINAL\", \"R FREE:
\")"

> dim(no.Frames.30_M271)
[1] 11 29
no.Frames.30_M271<-no.Frames.30_M271[-c(1:2),]
> > (no.Frames.30_M271[-c(1:2),])

Xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

> tablaGralM271_df<-data.frame(tablaGralM271)

> nameTablaGralM271<-tablaGralM271_df[2:3,3:31]
>no.Frames.30_M271<-tablaGralM271_df[4:12,3:31]
> names(nameTablaGralM271)<-c()
> names(nameTablaGralM271)
NULL
> nameTablaGralM271

no.Frames.30_M271[-c(2:3),]

>

>
Xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
tablaGralM271<-readODS::read.ods("Valores_R_&_LlG_Ver1.3.ods","M271",FALSE)
> no.Frames.30_M271<-tablaGralM271[4:12,3:31]
> encabezado<-tablaGralM271[2:3,3:31]
> encabezado<-tablaGralM271[2:3,3:31]
> colnames(encabezado)<-c()
> encabezado
> colnames(no.Frames.30_M271)<-encabezado

> encabezado<-tablaGralM271[3,3:31]
> colnames(encabezado)<-c()
> colnames(no.Frames.30_M271)<-encabezado

> plot(no.Frames.30_M271[2:5])
> no.Frames.30_M271["LLG:"]
LLG:
4 9019
5 8913
6 8732
7 8508
8 8183
9 7812
10 7401
11 7002
12 6549
> colnames(no.Frames.30_M271)
[1] "Proteina"
[2] "#Fram"
[3] "A"
[4] "#Proy Scala"
[5] "Asimetric Unit"
[6] "Overall"
[7] "OuterShell"
[8] "Overall"
[9] "OuterShell"
[10] "Overall"
[11] "OuterShell"
[12] "Overall"
[13] "OuterShell"
[14] "Overall"
[15] "OuterShell"
[16] "Overall"
[17] "OuterShell"
[18] "Overall"
[19] "OuterShell"
[20] "#Proy Phas"
[21] "LLG:"
[22] "#Proy Refmac"
[23] "R VALUE (WORKING SET) :"
[24] "FREE R VALUE:"
[25] "Comentarios"
[26] "R WORK :"
[27] "R FREE:"
[28] "R WORK :"
[29] "R FREE:"
no.Frames.30_M271[1,(1:29)]

xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
tablaGralM271<-readODS::read.ods("Valores_R_&_LlG_Ver1.3.ods","M271",FALSE)
> no.Frames.30_M271<-tablaGralM271[4:12,3:31]
> encabezado<-tablaGralM271[2:3,3:31]
> encabezado<-tablaGralM271[2:3,3:31]
> colnames(encabezado)<-c()
> encabezado
> colnames(no.Frames.30_M271)<-encabezado

> encabezado<-tablaGralM271[3,3:31]
> colnames(encabezado)<-c()
> colnames(no.Frames.30_M271)<-encabezado

> plot(no.Frames.30_M271[2:5])

> ggplot(no.Frames.30_M271,aes(x=Resolución,y=Phenix_final_Rwork,color=LLG))+geom_point()

Xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx

> tablaGralM271<-readODS::read.ods("Valores_R_&_LlG_Ver1.3.ods","M271",FALSE)
> > no.Frames.30_M271<-tablaGralM271[4:13,3:31]
> no.Frames.30_M271<-tablaGralM271[5:13,5:31]
> no.Frames.30_M271
E F G H I J K
5 1.6 206 390 0.155 1.737 0.196 2.306
6 1.65 207 390 0.151 1.388 0.19 1.784
7 1.7 185 390 0.144 1.111 0.181 1.431
8 1.75 186 390 0.137 0.906 0.172 1.166
9 1.8 189 390 0.129 0.742 0.161 0.951
10 1.85 188 390 0.122 0.621 0.152 0.793
11 1.9 190 390 0.115 0.484 0.143 0.615
12 1.95 191 390 0.108 0.432 0.135 0.549
13 2 192 390 0.103 0.389 0.128 0.493

> encabezado<-tablaGralM271[4,5:31]

> colnames(no.Frames.30_M271)<-encabezado

> colnames(no.Frames.30_M271)<-encabezado
> colnames(no.Frames.30_M271)
[1] "Resolución"
[2] "No_proyecto_SCALA"
[3] "No_residuos_U_asimetrica"
[4] "Rmerge_ Overall"
[5] "Rmerge_OuterShell"
[6] "Rmeas(all_I+ &_I-)_Overall"
[7] "Rmeas(all_I+ &_I-)_OuterShell"
[8] "Rpim(all_I+_ &_ I-)_Overall"
[9] "Rpim(all_I+_ &_ I-)_OuterShell"
[10] "Mean((I)/sd(I))_Overall"
[11] "Mean((I)/sd(I))_OuterShell"
[12] "CC(1/2)_Overall"
[13] "CC(1/2)_OuterShell"
[14] "Completeness_Overall"
[15] "Completeness_OuterShell"
[16] "Multiplicity_Overall"
[17] "Multiplicity_OuterShell"
[18] "No_proyecto_Phaser"
[19] "LLG"
[20] "No_proyecto_Refmac"
[21] "Refmac_Final_Rvalue_(WorkingSet)"
[22] "Refmac_Final_Rfree"
[23] "Refmac_comentario"
[24] "Phenix_start_Rwork"
[25] "Phenix_start_Rfree"
[26] "Phenix_final_Rwork"
[27] "Phenix_final_Rfree"

> with(no.Frames.30_M271,plot(Phenix_final_Rw
ork,Phenix_final_Rwork))
> ggplot(no.Frames.30_M271,aes(x=Multiplicity
_OuterShell,y=Phenix_final_Rwork,color=LLG,si
ze=Resolución))+geom_point()