Beruflich Dokumente
Kultur Dokumente
Review Article
Abstract
Burkholderia cepacia complex (BCC) is an important nosocomial pathogen in hospitalised patients, particularly those
with prior broad-spectrum antibacterial therapy. BCC causes infections that include bacteraemia, urinary tract infection,
septic arthritis, peritonitis and respiratory tract infection. Due to high intrinsic resistance and being one of the most
antimicrobial-resistant organisms encountered in the clinical laboratory, these infections can prove very difficult to treat
and, in some cases, result in death. Patients with cystic fibrosis (CF) and those with chronic granulomatous disease are
predisposed to infection by BCC bacteria. BCC survives and multiplies in aqueous hospital environments, including
disinfectant agents and intravenous fluids, where it may persist for long periods. Outbreaks and pseudo-outbreaks of
BCC septicaemia have been documented in intensive care units, oncology units and renal failure patients. BCC
is phenotypically unremarkable, and the complex exhibits an extensive diversity of genotypes. BCC is of increasing
importance for agriculture and bioremediation because of their antinematodal and antifungal properties as well as their
capability to degrade a wide range of toxic compounds. It has always been a tedious task for a routine microbiological
laboratory to identify the nonfermenting gram-negative bacilli, and poor laboratory proficiency in identification of
this nonfermenter worldwide still prevails. In India, there are no precise reports of the prevalence of BCC infection,
and in most cases, these bacteria have been ambiguously reported as nonfermenting gram-negative bacilli or simply
Pseudomonas spp. The International Burkholderia cepacia Working Group is open to clinicians and scientists
interested in advancing knowledge of BCC infection/colonisation in persons with CF through the collegial exchange of
information and promotion of coordinated approaches to research.
identify the NFGNBs, and poor laboratory proficiency B. contaminans and B. sabiae, have been proposed as
in identification of BCC prevails worldwide, including members of the BCC, using a polyphasic approach based
our own country. For this reason, reports of disease due on comparative 16S ribosomal RNA and recA sequencing,
to this organism are rare from India.[8-12] It needs to be multilocus sequence typing (MLST) and intermediate
differentiated from P. aeruginosa as BCC has inherently DNA-DNA binding values.[14,15]
contrasting susceptibility pattern to that of P. aeruginosa.
BCC is the fourth most common pathogenic NFGNB Epidemiology
worldwide after P. aeruginosa, A. calcoaceticus-baumannii BCC organisms are distributed ubiquitously and found
complex and S. maltophilia.[4] However, in Postgraduate most commonly on plant roots, the rhizosphere, soil and
Institute of Medical Education and Research (PGIMER), moist environments. The ability of BCC to cause disease
BCC has been recognised as the third most common is not limited to the human host, as these bacteria are
nonfermenter over the last 6 years.[8-11] also important plant pathogens.[16] In addition, BCC may
have useful commercial properties and have been used in
Taxonomy
agriculture as biocontrol agents and in the bioremediation
In 1950, William Burkholder, an American of toxic agents.[7,16] Plants of the Gramineae group appear
microbiologist first described this microorganism as the to be particularly important rhizospheric hosts for BCC
causative agent of bacterial rot of onion bulbs at Cornell bacteria. Unlike P. aeruginosa which may be carried
University. Until 1992, it was classified as P. cepacia. In by around 10% of humans (e.g., as a gut coloniser),
1992, P. cepacia and six other species belonging to rRNA BCC bacteria have not yet been recovered from human
group II of the genus Pseudomonas were transferred to sources other than the sites of infection. Therefore, in the
the new genus Burkholderia, a name given in honour of absence of patient-to-patient transmission in CF infection,
its discoverer.[3,4] In contrast to the genus Pseudomonas, the natural environment must be the reservoir of BCC
infection.[13] A highly comprehensive evidence has recently
the genus Burkholderia belongs to the subdivision of the
been shown by MLST, whereby greater than 20% of the
phylum Proteobacteria. All Burkholderia species possess
clinical isolates were indistinguishable from environmental
very large genomes ranging between 6 and 9 Mb in size,
isolates recovered from diverse environments such as river
and it is this huge genetic capacity which underpins their
water, onion, radish, maize rhizosphere, pharmaceutical
versatility in disease and natural biology. All species also
solutions, hospital equipment, shampoo and industrial
separate this DNA into two or more chromosomal replicons
settings.[17]
which may add greater flexibility in the acquisition, loss
and expression of genes. Their classification has undergone The availability of rapid and accurate tests for
considerable taxonomic changes over the last two decades. genomovar identification allowed for a comprehensive
Based on phenotypic and genotypic analyses, BCC is analysis of the prevalence of different BCC species. By
currently divided into 10 genomic species [Table 1].[13] The the age of 18 years, about 3.5% of CF patients harbour
term genomovar was introduced to denote phenotypically BCC. B. cenocepacia and B. multivorans are more
similar genomic species and presently, genomovars are predominant amongst CF patients than non-CF patients
recognised as new species. Recently, seven novel species, in four CF populations (United States, Canada, Italy and
B. latens, B. diffusa, B. arboris, B. seminalis, B. metallica, Australia).[18-20] Other than B. cenocepacia and B.
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6 Indian Journal of Medical Microbiology vol. 29, No. 1
multivorans, the remaining formally named species into three major clonal complexes, comprising epidemic
account for less than 10% of all CF infections caused by clones ET12 (RT-6 complex), PHDC (the Philadelphia-
the complex.[13] Since 2000, B. multivorans infection has District Columbia) (RT-46 complex) and Midwest (RT-
been more prevalent than B. cenocepacia infection amongst 88 complex).[28] These clones have a wide geographic
the UK CF population, indicating that regional differences distribution and exhibit varying degrees of genetic
may be present in the epidemiological distribution of recombination. Infection with clone ET12 has been
BCC.[21] For the isolates recovered from non-CF associated with increased mortality and the so-called
opportunistic infections, B. cenocepacia IIIA is again the “cepacia syndrome.”[29] In the United States, other epidemic
most dominant in terms of total numbers.[13] However, some strains such as the PHDC and Mid-West strains were also
authors have detected B. cepacia more frequently amongst identified and classified as the B. cenocepacia recA III-B
non-CF patients.[20] subgroup.[30] A strain belonging to PHDC clonal lineage has
been isolated from organic soils in four agricultural fields
Further analysis of the different recA lineages revealed that had been planted with onions for several years. This
significant geographical differences. Although type indicates that environmental strains may play a pivotal role
IIIB strains represented 75% of all US B. cenocepacia in the epidemiology of BCC infections and could explain
isolates, type IIIA strains are more prevalent in Canada the ongoing human acquisition despite infection control
and Europe, accounting for about 70% of all genomovar measures.[31] In contrast to some reports advocating the
III isolates.[13,22] The unique distribution of selected BCC identification of the cblA gene as a means of influencing
genomovars indicates the presence of epidemic strains patient segregation and infection control strategies, the
exhibiting particular virulence and transmissibility. So far, absence of such markers from some epidemic strains
the following two genetic elements have been identified indicates that the cblA or esmR markers may not be reliable
that are associated with epidemic spread: cblA, a gene indicators of transmissibility.[28,32]
encoding a protein for cable pilus production, and esmR
(or the B. cepacia epidemic strain marker), detected only It is interesting that man-made industrial settings also
in B. cenocepacia strains. cblA and esmR sequences may appear to be prone to contamination with BCC bacteria.
be encoded on a chromosomal region which is unstable Contamination with BCC bacteria may also occur in the oil
in some B. cenocepacia epidemic strains.[23,24] As B. and fuel industry, which is not surprising given that these
cenocepacia ET12 (‘Edinburgh⁄Toronto⁄ET12 epidemic B. bacteria are able to grow on a diverse range of hydrocarbon
cepacia’ lineage) is mainly isolated from clinical settings substrates.[33] Using MLST, several BCC sequence types
and not from the natural environment, we assume not only have been found that overlap clinical, industrial and
that these species occupy the same niche, but also that natural sources [Figure 1], which clearly demonstrates the
genetic exchange is occurring within human beings and not
in the natural environment.[25]
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January-March 2011 Gautam, et al.: Burkholderia cepacia complex 7
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8 Indian Journal of Medical Microbiology vol. 29, No. 1
Indian non-CF cases Figure 2: RFLP analysis (HaeIII) of the B. cepacia complex recA
amplified by PCR. The most common pattern G is shown in all the
In India, there are no precise reports of the prevalence lanes. Molecular size standard (50-bp ladder) is in the first lane.
of BCC infection due to the lack of specific laboratory tests
and, in most cases, these bacteria have been ambiguously of polymyxin B per ml, 10 µg of gentamicin per ml and
reported as NFGNB or simply Pseudomonas spp. For this 2.5 µg of vancomycin per ml).[4,37] A comparison of all
reason, reports of diseases due to these organisms are rare three media revealed a superior performance of the BCSA,
and it has been reported from few tertiary care centres achieving 43, 93, and 100% growth of BCC organisms at
in north India.[8-11] A sudden upsurge of BCC has been
24, 48, and 72 hours, respectively. BCSA is more selective,
observed in non–CF-septicaemic patients of PGIMER,
acts by suppressing growth of non-BCC bacteria, whereas
Chandigarh, and in Escorts Heart Institute and Research
BCC members form visible, smooth, pinpoint colonies
Centre (EHIRC), Delhi. Within four years (2006-2009),
within 24 hours. Non-BCC organisms that are capable
approximately 150 isolates of BCC were obtained in
of growing on BCSA are B. gladioli, Ralstonia spp. and
PGIMER. This is in comparison to a study by Reik et al.
Pandoraea spp.[40,41] To aid routine diagnostic laboratories,
who reported 90 isolates over the span of eight years from
the authors have described the methods to identify BCC
various clinical specimens of non-CF patients.[8,20] BCC
by conventional biochemical reactions with the available
from PGIMER has been isolated from blood cultures,
infrastructure and resources, which may be substantiated
pus, respiratory specimens, body fluids and CSF. All
by molecular methods for species identification.[11] Out of
BCC isolates of EHIRC, Delhi, were from blood culture.
At PGIMER, BCC has been isolated from the patients 58,717 blood cultures performed at PGIMER from April,
admitted in the different wards of PGIMER, with increased 2007 to March, 2009, 21% (12 331/58 717) tested positive
isolation from children admitted in the Advanced Pediatric for bacterial culture and 1,256 (1 256/12 331, 10.2%)
Centre.[8,10] BCC has been recognised as the third most of these positive cultures grew NFGNB. Of these 1,256
common nonfermenter over the last six years in PGIMER NFGNB, 825 (825/1,256, 65.7%) were Acinetobacter
after P. aeruginosa and A. calcoaceticus-baumannii spp., 324 (324/1,256, 25.8%) were Pseudomonas spp.
complex.[8-11] It has been observed that B. cenocepacia and 60 (60/1,256, 4.8%) were BCC. Thirty five (35/1,256,
(RFLP type G, [Figure 2]) continues to be the most 2.8%) isolates were identified as S. maltophilia. Twelve
prevalent species of BCC amongst Indian non-CF patients (12/1,256, 0.9%) isolates could not be identified with
(PGIMER and Escorts, 2006). This is a cause of concern the limited available conventional biochemical tests
as patients with B. cenocepacia infections face the highest (unpublished data). Hence, by the conventional methods
mortality and have higher rate of transmission.[8-11] for the identification of the NFGNB, 99% of the NFGNB
in a routine microbiology laboratory can be identified, and
Laboratory Diagnosis accordingly the appropriate antimicrobial therapy can be
given to the patient.
It has always been a tedious task for a routine
microbiological laboratory to identify this NFGNB, Automated Identification Systems
and poor laboratory proficiency prevails worldwide. In
routine clinical laboratories, the identification of putative Members of the BCC can be identified by available
BCC isolates is generally performed using a combination commercial tests, such as API 20NE, Phoenix, MicroScan
of selective media, conventional biochemical analysis or Vitek. Identification through commercial kits and
and/or commercial systems. Three media commonly automated systems is not fool-proof as many non-
used are as follows: the P. cepacia agar (PCA), the Burkholderia betaproteobacteria (Ralstonia picketti
oxidation-fermentation polymyxin bacitracin lactose and Pandoraea species) are misidentified as BCC and
agar (OFPBL),and more recently the B. cepacia selective some BCC strains as P. aeruginosa. A large polyphasic
agar (BCSA) (containing 1% lactose and 1% sucrose in analysis of 1,051 isolates from 115 CF treatment centres
an enriched base of casein and yeast extract with 600 U in 91 US cities conducted in 2000 revealed an overall
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January-March 2011 Gautam, et al.: Burkholderia cepacia complex 9
colonised patients. In 2002, no new patients were infected 2. Slama TG. Gram-negative antibiotic resistance: there is a
with BCC for the next 1 year with the introduction of such price to pay. Crit Care Med 2008;12:4.
measures in Palermo, Italy.[54] However, segregation will 3. Burkholder W. Sour skin, a bacterial rot of onion bulbs.
Phytopathology 1950;40:115-8.
not prevent sporadic acquisition of BCC organisms from
4. LiPuma JJ CB, Lum GD, Vandamme PAR. Burkholderia,
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Protection Agency placed a moratorium on the new et al. Two cases of Burkholderia cenocepacia in septicemic
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11. Gautam V, Ray P, Vandamme P, Chatterjee SS, Das A,
BCC, a devastating pulmonary pathogen in CF patients, Sharma K, et al. Identification of lysine positive non-
has also been reported as a cause of bacteraemia in few fermenting gram negative bacilli (Stenotrophomonas
centres from our country. Due to its ability to thrive in maltophilia and Burkholderia cepacia complex). Indian J Med
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Source of Support: Nil, Conflict of Interest: None declared.
resistant gram-negative bacilli isolated from patients with
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