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1) Structure 1: this molecule has one branch, which is on the second carbon of the main
chain.
2) Structure 2: There are two main branches on the same carbon atom of the main chain.
3) Structure 3: There are two branches on different carbons of the main chain.
NOTE THAT EVERY CARBON ATOM IN ALL THE COMPOUNDS HAS A TOTAL
OF FOUR BONDS.
Saturated and unsaturated compounds.
Saturated organic compounds contain only carbon to carbon single bonds in their structure.
Unsaturated organic compounds contain at least one carbon to carbon double bond or one
carbon to carbon triple bond in their structure.
Formulae of organic compounds
There are five types of formulae which can be used to describe and identify organic
compounds:
molecular formula
empirical formula
full structured or displayed formula
condensed strutural formula
general formula
Full structural formula or displayed formula
The full structural formula or displayed formula of a compound shows how all the atoms in
one molecule of the compound are bonded to one another.
Note the following;
all bonds in the molecule are shown when writing full structural formulae;
full structural formulae are shown only in two dimensions- full structural formulae
are flat and do not indicate the actual shapes of the molecules, nor do they show how
the atoms are positioned in space relative to one another.
The figure below shows the full structural formulae of some organic compounds:
General formula
The general formula gives the numerical relationship between the number of carbon atoms
and the other types of atoma in one molecule of any of the compounds in the same
homologous series.
Homologous series
A homologous series is a group of organic compounds with the same general formula and
showing specific chracteristics.
We can classify similar organic compounds into well defined sets or groups known as
homologous series. The members of a homologous series are usually arranged in order of
increasing molecular mass. The characteristics of a homologous series are:
All members of the series have the same general formula
The molecular mass of each member of the homologous series differs from the
member positioned before or after it (its nearest neighbour) by a –CH2- unit, which
corresponds to a molecular mass of 14
Members of a homologous series have similar chemical properties
For a given homologous series, physical properties(e.g boiling point, density and
enthalpy of combustion), change in a regular way as the molecular mass or carbon
chain length of the compound increases.
All members of aperticular homologous series may be prepared by the same genral
method.
The main homologous series and theor general formula are shown below:
Now look at the stages needed to name the following branched-chain compound:
Step 1: Establish the homologous series to which the compounds belongs.
Based on its molecular formula, 𝐶6 𝐻14 , the compound is an alkane. The name will
end in ‘-ane’/
Step 2: Note the number of carbon atoms in the longest (main) chain.
There are five carbon atoms in the longest chain. The prefix will be ‘pent’
Step 3: Identify and name the alkyl group that branches off the main chain in the compound.
The branch has the formula ‘CH3’. The name of the branch is ‘methyl’.
Step 4: Assign numbers to the carbon atoms in the longest chain so that the branch has the
lowest possible number.
The position of the methyl branch is carbon 2, of we count from the right-hand side of
the diagram. We need to use ‘2’ in the name of the compound (rather than 4).
Step 5 Form the name from the parts obtained in steps 1 to 4.
The name of the branched-chain compound is 2-methylpentane.
Naming organic compounds with more than one functional group
So far, we have discussed compounds with only one functional group. However, organic
compounds may have more than one functional group, and these groups may be the same or
different.
To name such compounds, we need to indicate;
the types or types of functional groups
the number of functional groups
the positions of the functional groups that the compound contains.
We will now work out names for these compounds:
Count the number of carbon atoms to get the main part of the name. Compound H has
two carbon atoms, so its name is based on ethane. Compound I has 6 carbon atoms, so
its name is based on hexane.
Both molecules contain the same functional group which is a hydroxyl group, so we
need to have ‘ol’ in the names of the compounds.
The compounds are diols because there are two alkanol functional groups.
We need to use numbers to indicate the positions of the functional group in the two
molecules. The numbers we need are ‘1,2’ for H and ‘1,6’ for I.
H is called ethane-1,2 diol. I is called hexane-1,6-diol.
Sometimes molecules contain two or more different functional groups. Here are two
examples:
Alkanes can be gases, liquids or solids at room temperature. Alkanes may be used to show
that the physical properties change in a regular way for a given homologous series. For
example, boiling point, density and enthalpy of combustion all increase with an increase in
molecular mass or length of the carbon chain. The figure below shows that an almost linear
relationship exists between the boiling point of the alkanes and the number of carbon atoms
in the chain.
or as:
Both these structural formulae correspond to a molecular formula of C4H10. This means that
the two compounds are isomers. Isomers differ in their structure. They cannot be converted to
one another by turning the molecule or by rotation about the carbon-carbon bonds.
The physical properties of isomers such as butane and 2-methylpropane differ. However,
their chemical properties are very similar because the two compounds contain the same
functional groups.
Chemical Properties of the Alkanes
Members of the alkane homologous series have similar chemical properties.
1) Combustion
If ignited, alkanes burn in an excess of air (or an excess of oxygen) to produce carbon
dioxide, water and heat. The reaction is described as a complete combustion reaction.
2C2H6(g) + 7O2(g) → 4CO2(g) + 6H2O(l) + heat
However, if the supply of air or oxygen is insufficient, the alkane molecules are not
completely oxidised to carbon dioxide and water. Other products such as carbon monoxide
and carbon, and even hydrogen, might be formed. Note that the reaction is exothermic.
2) Reaction of alkanes with halogen
Alkanes undergo substitution reactions with the halogens (especially chlorine) in the presence
of bright light, usually sunlight,(A substitution reaction is a reaction that replaces one or more
hydrogen atoms in a saturated compound by some other atom or group of atoms). The
substitution reaction gives a mixture of organic products and hydrogen chloride gas as shown
in the following equations.
You can show that substitution is taking place by reacting the HCl(g) produced with
concentrated ammonia. Dense white fumes of ammonium chloride will be formed:
HCl (g) + NH3(g) → NH4Cl(s)
The organic products are known as halogenoalkanes. The number of hydrogen atoms
replaced in the reaction depends on the relative quantities of alkane and halogen used.
Note that the hydrogen molecule is added across the double bond. One hydrogen atom is
added to each of the carbon atoms linked by the double bond. Hydrogenation reactions with
unsaturated alkene-type molecules are carried out in industry.
The hydration of alkenes to produce alkanols
Hydration is the addition of a water molecule across a double bond in an unsaturated
molecule.
Reforming
The process of reforming is similar to cracking- straight chain hydrocarbons are broken up
and then reassembled into branched-chain hydrocarbons. In reforming, low grade gasoline
(with a low octane rating) is converted to high grade gasoline (with a high octane rating.
The Alkanols
The reactions of alkanols
Ethanol and the other alkanols undergo a number of reactions based on the presence of the
hydroxyl (-OH) functional group.
Reactions with more reactive metals
Highly reactive metals, such as sodium, lithium and calcium, react with low molecular mass
alkanols, such as methanol, ethanol and propanol. These reactions give hydrogen gas and
salts of the alkanols called alkoxides. The equation for the reaction of ethanol with sodium
metal is:
2Na(s) + 2CH3CH2OH(l) → 2CH3CH2O-Na+(s) +H2(g)
This reaction is similar to that of sodium and water, but it is less vigorous. We can think of
ethanol as having the same functional group as water.
Oxidation of alkanols
Powerful oxidising agents such as acidified potassium dichromate(VI) or acidified potassium
manganate(VII) convert alkanols to organic acids. In these reactions, an intermediate alkanal
or aldehyde is formed:
During this reaction, the reaction mixture changes colour from purple to colourless. The same
reactions take place with potassium dichromate(VI), but the colour change is from orange to
green.
Dehydration of alkanols to alkenes
Dehydration is a chemical reaction in which a molecule of water is removed from one
molecule of a compound to form a new compound. Alkanols react with dehydrating agents,
such as concentrated sulphuric acid or anhydrous aluminium oxide, to form alkenes. The
reaction is described as a dehydration. The water lost across two adjacent carbon atoms in the
alkanol. This results in the formation of a double bond between the two carbon atoms.
Yeasts are unicellular fungi and are the source of the enzymes which are necessary for
fermentation. Yeast cells grow rapidly and bud freely if sucrose, water, specific nitrogen
sources, vitamins and mineral salts are present. The figure below summarizes the stages in
the manufacture of rum from molasses. The final distillation can be controlled to obtain
ethanol for either industrial purposes (99.6% ethanol) or rum(40% ethanol).
The distillate is processed further. Some flavours are removed during the processing and the
raw spirit is matured in oak casks before it acquires the characteristics (Colour and taste) of
rum.
The effects of ethanol on the body
Some of the short-term effects of ethanol are:
initial relaxation
euphoria
loss of inhibitions
impaired coordination
reflexes slow down
mental processes slow down
attitude changes
Ethanol is a toxic drug. A concentration of 4 parts per 1000 in the blood can lead to a deep
anaesthetic effect of even death. When someone consistently consumes more ethanol than the
body can break down, there is a significant rise in blood ethanol level, which leads, among
other things, to:
impaired circulation
accumulation of toxins
excessive loss of fluids via urination
problems of digestion, hence stomach problems
Malfunction of organs such as the pancreas, liver and brain in the long term.
3 THE ALKANOIC ACIDS AND ESTERS
Alkanoic acids
Alkanoic acids are also known as carboxylic acids. Long-chain alkanoic acids, particularly
those found in plants and animals are known as fatty acids. Alkanoic acids and esters are
constituents both of naturally occurring substances and of manufactured products with
distinct flavours and odours.
Alkanoic acids can be represented by their general formula 𝐶𝑛 𝐻2𝑛+1 𝐶𝑂𝑂𝐻, which can be
shown more conveniently as R-COOH.
The –COOH group (carboxyl group) is the functional group in organic acids. The carboxyl
group gives this class of compounds:
acidic properties
relatively high boiling points
solubility in water
Ethanoic acid
Ethanoic acid, CH3COOH, has the following structural formula:
Ethanoic acid is a typical representative of the homologous series of the alkanoic acids. It is
found on the average kitchen shelf as vinegar, which is a 5% solution of ethanoic acid.
Vinegar can be used as a preservatives in pickling and also other types of food preparations.
Ethanoic acid is easily recognised by its ‘sharp’ smell and sour taste.
Preparation of ethanoic acid
A sample of ethanoic acid can be prepared by refluxing a mixture of ethanol and acidified
potassium dichromate(VI) or acidified potassium manganate(VII). Then the product mixture
needs to be distilled. You need to collect the fraction which comes off with a boiling point
neat to 118𝑜 𝐶.
The reactions of alkanoic acids
The reactions of organic acids nay be summarised using ethanoic acid as example. Alkanoic
acids are weak monobasic acids. They are incompletely dissociated. The alkanoic acids show
the typical reactions of mineral acids but they react less vigorously because they are weak
acids, whereas the mineral acids are strong.
1) Reactions with metal
Metals high in the reactivity series react with organic acids to produce hydrogen gas and the
salt of the organic acid:
The reaction between reactive metals and organic acids is less vigorous than the
corresponding reactions with mineral acids.
The balanced equations indicate that ethanoic acid is a monobasic acid. Note that only one
hydrogen atom, that of the –COOH group of the acid, is ‘acidic’.
2) Reactions with metal oxides and hydroxides
The oxides and hydroxides of metals react with organic acids to form the salt of the acid and
water. This is a neutralisation reaction.
The names of ester are derived from both the alcohols and the organic acids from which they
are derived. Look at the following names and see if you can work out how the name of the
ester is produced.
Note that the ‘oate’ comes form the acid and the alkyl part come from the alcohol. Note,
however, that in writing the molecular formula or structural formula of the ester, the acid part
is normally written first. Look at the structure of ethyl propanoate and the link the two parts
of the name to the formula.
When ethanol is refluxed with excess ethanoic acid, in the presence of sulphuric acid as a
catalyst, the ester ethyl ethanoate is formed. Ethyl ethanoate (b.p 77𝑂 𝐶) can be obtained from
the product mixture by distillation.
Hydrolysis of Esters
The ester linkage is formed by the elimination of water and can therefore be broken by the
addition of water. This process is known as hydrolysis. (Hydrolysis of an ester involves the
splitting of the ester linkage by the action of water to reform the alkanoic acid and the
alkanol)
The hydrolysis of esters proceeds very slowly and can be catalysed by refluxing the ester
either with dilute mineral acid (acid hydrolysis) or an excess of dilute alkali (alkaline
hydrolysis).
Acid hydrolysis of ethyl ethanoate forms ethanol and ethanoic acid, as shown in this
equation:
With alkaline hydrolysis, the alkanoic acid is formed first. The alkanoic acid is then
neutralized by the excess alkali, to form the sodium salt of the acid. The other product is the
alkanol.
The typical reaction of unsaturated molecules like the alkenes is an ADDITION reaction.
Unsaturated monomers will therefore bond by an addition reaction to form addition
polymers. The process by which the polymers are formed is addition polymerisation.
Many of the bi-functional molecules used as monomers contain two identical functional
groups. Such monomers rarely bond with each other, so two different bi-functional
monomers are used and they bond by condensation reactions. The polymer formed is a
condensation polymer and the process by which it is formed is condensation polymerisation.
Classifying Polymers
We can group polymers based on three sets of criteria
1) Classification based on source
Where ∙ represents an unshared electron. Species B (which is highly reactive) then attacks
another carbon-carbon double bond, leading to the formation of species C.
Species C is itself reactive and will, in turn attack another ethene molecule, eventually
leading to the formation of the polymer.
Where X= H for ethene, X = Cl for chloroethene (vinyl chloride) and X = a benzene ring for
phenylethene (styrene).
Since there is no loss of material during addition polymerisation, the empirical formula of the
polymer is the same as that of the monomer.
Industrial preparation of polyethene and other addition polymers
Polyethene, a well-known polymer, exists in two forms:
1) Low density polyethene (LDPE)
2) High density polyethene (HDPE)
LDPE and HDPE are structurally different materials. This is because they have different
properties such as:
the length of polymer chains
the spacing between the chains
the extent to which the chains are interlinked
The conditions of polymerisation can have an effect on the properties of the polymer.
Condensation Polymerisation
Condensation polymerisation is essentially a method of joining monomers by eliminating
small molecules such as water. This is in contrast to addition polymerisation, as this only
produces the polymer. Condensation polymers do not have the same composition as the
monomers from which they are made.
Polyesters
Polyesters are polymers which contain many ester linkages. They are formed in condensation
reactions between di-acids and di-alcohols (usually called diols). Remember that a di-acid has
two organic acid (-COOH) groupings and that a di-alcohol contains two alcohol (-OH)
groupings. Here are examples of a di-acid (benzene-1,4-dicarboxylic acid, commonly called
teraphthalic acid) and di-alcohol (ethane-1,2-diol).
In the sequence below, a di-acid(E) and a di-alcohol (F) combine to form a further compound
(G), a simple ester that is capable of condensing on both ends.
Compound G has the following groups:
an ester grouping
an uncombined alcohol grouping
an uncombined acid grouping
Compound G then undergoes further condensation reactions at both ends of the molecule to
form compound H.
Even more condensation reactions will eventually lead to a polyester of molecular mass
10000-20000.
Polyamides
Polyamides are polymers which contain many amide (peptide) groups. The carbon to
nitrogen bond within this group is called the amide (peptide) linkage.
Nylon is a typical polyamide. It can be prepared as shown in the following sequence.
Both these starting materials can be made from phenol, which is obtainable from the naptha
fraction of oil. When the di-acid(J) reacts with the diamine(K), then species L is formed:
Special L has an amide linkage, but it also contains two other functional groups. These two
functional groups are capable of further condensation to produce the polymer which is
represented by one repeat unit:
In this structure, the side group R is different for different amino acids. Although over 80
amino acids are known, only 26 occur naturally in living systems. Twenty of these naturally
occurring amino acids are frequently combined in proteins.
Peptide Formation
When two amino acids are linked by a condensation reaction, a dipeptide is formed.
The different superscripts on R1 and R2 indicate different R groups and therefore different
amino acids. The carbon nitrogen single bond is the newly formed amide or peptide bond.
Note that the dipeptide still has functional groups at both ends, so that further condensation
reactions with other amino acids are possible, resulting in an increase in the length of the
peptide chain.
A polypeptide is formed when a large number of amino acids are linked. The term
polypeptide comes from the many –CONH- groups that occur at intervals along the polymer
chain. The figure below shows polypeptide formation.
When 50 or more amino acids have been condensed together, the polypeptide formed is
called a protein. Protein structures are very complicated. Insulin for example, has a molecular
formula of C254H377N65O75S6. Each protein is made from an arrangement of amino acids that
is different from every other proteins. Proteins have a very high relative molecular mass
ranging from 6000 to 100000. In living systems the process of condensing amino acids is
known as protein synthesis and this is guided by the DNA in the cells.
Hydrolysis of proteins
Hydrolysis of proteins is the splitting of the peptide bonds in a protein by the action of water
to form smaller peptides or individual amino acids. If all peptide bonds are broken the
hydrolysis is complete. If some bonds are broken, the hydrolysis is partial.
Our digestive system breaks down the proteins we eat into amino acids. For example,
enzymes in the stomach, such as pepsin and rennin catalyse the splitting of the peptide bonds
in proteins to release the amino acids. The hydrochloric acid in the stomach provides the
correct acidic medium for the reaction. Digestion of protein is a hydrolysis reaction.
Hydrolysis of proteins can be accomplished in the laboratory in the presence of acid or alkali.
The acid or alkali acts as the hydrolysing agent.
Acid hydrolysis of proteins
Treat the protein with concentrated hydrochloric acid at 𝟔𝟎𝑶 𝑪 for 24 hours or longer, in the
absence of oxygen
Alkaline hydrolysis of proteins
Treat the protein with concentrated sodium hydroxide for 6-8 hours. In the laboratory the
hydrolysis is complete and a mixture of amino acids is left. These amino acids can be
separated by chromatography.
In the body, the amino acids obtained from hydrolysis of proteins can then be used to
synthesize the many specialised proteins that are essential to health. While our bodies can
convert some amino acids into others which we need, it is not capable of making eight of the
naturally occurring amino acids. These eight essential amino acids are known as the essential
amino acids. We must eat food which can supply our requirements of these essential amnio
acids. Foods such as meat, milk, cereals and vegetables are important constituents of our
diets, because they supply these essential amino acids.
Tests for proteins and amino acids
You are aware that polymers and their monomers have very different properties. This
difference can be used to follow the hydrolysis of proteins. Before the hydrolysis, any tests
for the presence of free amino acids should be negative. At the end of the hydrolysis, tests for
the proteins should be negative.
Testing for amino acids
Reagent: ninhydrin solution
Procedure: add 1cm3 of ninhydrin to food or solution of amino acid. Boil for 1-2
minutes, then allow to cool.
Results: a blue color indicates that amino acids (or proteins which contain a free amino
acid group) are present.
Testing for proteins
Reagent: NaOH(aq) and copper sulphate(aq) (known as the biuret reagent).
Procedure: add biuret reagent to food material in water and heat
Results: a violet colour indicates the presence of proteins
Another test for Protein
Intimately mix the food sample with soda lime (a mixture of sodium hydroxide and
calcium oxide)
Place the mixture in a hard glass test-tube.
Heat the mixture, placing a moist strip of red litmus at the mouth of the test-tube.
If the food contains proteins, ammonia gas will be given off, turning the red litmus paper
blue.
Polysaccharides
Polysaccharides are polymers that belong to a group of naturally occurring compounds
containing carbon, hydrogen and oxygen based on the formula Cx(H2O)y. The simplest
carbohydrates are the monosaccharides, which have a general formula of CnH2nOn. Some
examples of these simple sugars are glucose, fructose and galactose. These all contain six
carbon atoms and have the same molecular formula, C6H12O6 but they have different
structures and are therefore isomers. The figure below shows one way that the structure of
glucose can be shown:
Glucose molecules are the building blocks for the carbohydrate polymers. The condensation
of glucose molecules can occur in a stepwise manner forming disaccharides, trisaccharides,
and eventually more complex carbohydrates, the polysaccharides. Examples are shown
below.
Polysaccharide formation
Disaccharides and polysaccharides contain an ether linkage that is the C-O-C linkage. This
linkage is commonly called the ‘glycosidic’ linkage. Disaccharides have two reactive (end) –
OH groups. These reactive groups may undergo further condensation reactions to yield a
trisaccharides and eventually, the polysaccharides.
Hydrolysis of carbohydrates
The polymerisation of glucose molecules to form a polysaccharide such as starch is a
condensation reaction. Hydrolysis is the reverse of the condensation process. Starch
molecules, for example, are broken down partially to maltose or completely to glucose.
Testing for carbohydrates
Testing for starch
Reagent: iodine solution
Procedure: to a sample of starch (or food) and water, add a few drops of iodine solution.
Results: a blue-black colour develops if starch is present
Testing for a reducing sugar
Reagent: Benedict reagent or Fehling’s solution.
Procedure: to glucose or food or water, add Benedict reagent and heat.
Results: A series of colour changes are seen. Eventually an orange-red precipitate is obtained,
indicating the presence of reducing sugars.
Triglycerides
A triglyceride is a triester formed by the condensation reactions between a trihydroxyl
alcohol known as glycerol and three long-chain organic acids known as fatty acids. As
mentioned before, fats and oils are not polymers even though they are formed by the same
type of chemical reaction, condensation. Fats and oils are triglycerides.