mammalian cell engineering via Cas9 protein transfection”,
was written by Xiquan Liang, Jason Potter, Shantanu Kumar, and others in California, USA, year 2015.
At first glance, the journal’s title, “Rapid and highly
efficient mammalian cell engineering via Cas9 protein transfection”, has this “Cas9” term that I think most readers from outside their field would not comprehend. The term actually denotes an endonuclease, or an RNA -guided DNA. Aside from that the title clearly indicated what the study is for, in a brief and concise manner. Also, the authors provided a set of unfamiliar terminologies or jargons .
Upon reading the abstract, I’ve already gained
knowledge of what the study is for. It was written in a clear, brief, precise manner and phrased in a comprehensible and simple structure, just like what an abstract should be. The purpose or significance is clearly stated as: “to improve the efficiency and indel rate in genetic engineering”. However, the method used, and experimentation part was not emphasized in the abstract which for me is the most interesting part. But in general, the abstract is well written.
An expounded idea of the abstract is the best way to
describe the article’s introduction. It gave an insight to the main significance and purpose of the paper regarding gene editing, specifically, greatly improving the efficiency and the indel rate or the rate at which gene is deleted or replaced . Aside from that, I learned that there are also differ ent types of RNA besides tRNA and mRNA learned from school. Some of these are, tracrRNA which means trans -activating RNA, gRNA which means guide RNA and others.
They used sorts of biological samples and material such
as human and mice stem cells to experiment on. They also used culture media to grow the subject cells into, sorts of expensive apparatuses, serums, protein solutions, biological enzymes and such. The first thing they did was to make the gRNA or guide RNA to be used in the transfection a nd gene insertion. As far as I understand, they did this by letting oligonucleotides, the stem cell counterpart of genetic engineering, fit or pattern in to gRNA templates. The next step they did was in vitro transcription to increase the concentration or simply increase the number if gRNA, they measured the concentration of the gRNA using Qubit RNA BR Assay Kit.
After the gRNA is made, the experimenters moved to the
next phase, which is the cultivation of mammalian cells. Human embryonic stem cells were cultured in Essential8TM medium on tissue culture dishes coated with a qualified reduced growth factor basement membrane matrix. After thawing, cells were passaged 2–3times before using for transfection. The cultures were maintained with daily media changes and were passaged regularly using an enzyme called collagenase. All cultures were maintained in 5%CO2 at
37 ◦C in a humidified incubator. Prior to transfection,
adherent cells were detached with GibcoTrypLE Select
Enzyme and then resuspended in the appropriate growth media.
For a student, the results and discussion part is very
vague since it requires a greater understanding or specialization in biotechnology, but as far as I can understand, they have achieved their target objective: to efficiently delete or replace a gene in the DNA structure of mammalian stem cells.
The conclusion was clear and understandable. They
stated that the whole procedure can be done in as little as three days. They also found that Cas9 mRNA/gRNA and Cas9 RNP performance was superior, thus, they were able to efficiently modify the genome at multiple loci simultaneously, thereby immensely reducing workload.