Beruflich Dokumente
Kultur Dokumente
Yuquan Weia, Yue Zhaoa, Yuying Fana, Qian Lua, Mingxiao Lib, Qingbin Weic, Yi Zhaoa,
b
State Key Laboratory of Environment Criteria and Risk Assessment, Chinese Research Academy of
c
Heilongjiang Province Environmental Monitoring Centre, Harbin 150056, China
Abstract: This study aimed to assess the effect of phosphate-solubilizing bacteria (PSB)
application and inoculation methods on rock phosphate (RP) solubilization and bacterial
community during composting. The results showed that PSB inoculation in different
stages of composting, especially both in the beginning and cooling stages, not only
improved the diversity and abundance of PSB and bacterial community, but also
indicated that the combined inoculation of PSB in the initial stage with higher
inoculation amount and in the cooling stage with lower inoculation amount was the best
way to improve the inoculation effect and increase the solubilization and utilization of
1
fixation of phosphates by humic substance and phosphate-accumulating organisms.
(PAP).
*Corresponding author
1. Introduction
development and population expansion means the growing output of municipal solid
waste (MSW), which affects the urban environment (Wang et al., 2015a). To achieve the
stabilization process (Wei et al., 2007). Microbes play key roles in all the events related
Phosphorus (P) is an essential element for plant growth and is widely applied as
inorganic fertilizer for agricultural purposes (Wei et al., 2015). Rock phosphate (RP) is
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the main base raw material from which inorganic fertilizers can be made in large
quantities (Owen et al., 2015). However, considering that the reserves of RP are
relatively finite, it is crucial to enhance the availability of P and avoid potential risk for
P loss in runoff and leachate. A number of studies showed that most of the organic
wastes composting from different sources could influence the content and distrib ution
of P fractions (Wei et al., 2015; Hashimoto et al., 2014; Ngo et al., 2013), thus, some
organic wastes with low P content are always used for composting amended with RP for
ecosystems (Wei et al., 2016a). Given that composting ecosystem exhibited rich
inhibit microbial activities, numerous studies have been conducted to apply inoculants
for adjusting the correlation between microbial communities with different biochemical
reducing ammonia emission (Zhao et al., 2016b; Zhang et al., 2016; Xi et al., 2015;
Hachicha et al., 2012), while there is little information about the relationship among the
efficiency.
However, higher P-solubilization may lead to an increased potential risk for P loss in
runoff and leachate and be possibly linked to the activity of PSB with a negative
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feedback (Wei et al., 2015; Mander et al., 2012). So, to improve the long-term fertility
humic substances (Zhao et al., 2017; Wei et al., 2007). It is known that humic matter
can affect the solubility of different P-compounds in soils through its chelation capacity
formation of humic substances may provide powerful new insights into the
In this work, five MSW composting experiments were conducted with different PSB
or RP-addition disposals. The principal goals of this study were to (1) analyze the
compare the influence of different inoculation methods on PSB activity and P fractions,
(3) characterize the interactions between inoculants, indigenous bacteria, P forms and
treatments, and (4) present a biological and physicochemical method for future studies
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2.1. Composting experimental design
Composting materials were mainly residual MSWs with inorganic materials such as
metals, plastics, and glasses removed before composting, which were collected from
Northeast Agricultural University (Harbin, China). Straw chopped into small pieces
(20-30 mm) was used to adjust the initial C/N ratio of composting materials. The basic
chemical characterization of the raw materials were shown in Table 1. The ratio of water
content is approximately 60% and C/N ratio is about 25:1. Composting materials were
put in the special small cylinder compost reactor, which referenced to Zhao et al.
(2016b). The changes of reactor temperature see supplementary Fig. S1. The actual
temperature of compost was basically the same as reactor. During composting, moisture
was maintained at 50-60% and the ventilation rate was 0.5 L min-1. The initial and final
Five groups of composting experiments were carried out and all of the treatments
were replicated three times. MSW was chosen as the major raw material because it has a
relatively low P content (Wei et al., 2015) and therefore allowed the effects of the PSB
and RP on composting to be readily observed. The first group is blank control group
(CK). Nothing is added during composting. For the other four groups, RP was added
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with 5%, which was obtained from KaiLin company, Guizhou, with 28.27% P2O5, 3.55%
Olsen P and 5.21% soluble P in 2% citric acid. The group with only RP addition was
prepared as negative control (CP). There are three PSB treatment groups, which are
inoculated in the initial stage (0d) as CMP1, in the cooling stage (8d) as CMP3 and in
the above two stages as CMP2, respectively. The inoculant of composting in this study
was a kind of compound PSB agent, which was described in a separate paper (Wei et al.,
2016b). Inoculant in each group was at the level of 1.5% in dry weight with the same
inoculation amount, and the concentrations of the composite PSB strains were 1×108
CFU mL-1. The whole time of the experiment in this work is 20 days and the samples
collected every two days. Some samples were stored at -20°C for DNA extraction and
others were used for physical-chemical analysis and P content, while those for microbial
The cultivable bacteria and PSB were estimated using a standard dilution-plating
Nutrient Agar (Cultimed, Spain) for 48h at 30°C. PSB was cultivated in National
(NBRIY) medium supplemented with 1.5% Bacto-agar (Difco Laboratories, Detroit, MI,
USA).
DNA was isolated for dominant microorganism using soil DNA kit (Omega Biotek,
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Inc.). To analyze the DNA of the bacterial community, 16S rRNA genes were amplified
using the prokaryotic primers 341F/534R (Xi et al., 2015). A GC clamp was attached to
Polymerase chain reaction (PCR) conditions for each 50-μL reaction mixture and touch
down PCR protocol were performed as described by Wei et al. (2016a). Each PCR
Gene Mutation Detection System (Bio-Rad Laboratories, Inc.) was run at 150 V for 4 h
3×GelRed™ nuclear acid gel stain (Biotium, USA) and photographed with a UVP
Imaging System (UVP Inc., USA). This procedure was performed in triplicate for each
sample with different gels. Representatives of bands that were clear and had high
intensity were excised from DGGE gels and transferred to 30-μL Milli-Q water
(Millipore, USA), incubated overnight for elution of DNA at 4°C. Then, PCR was
performed to re-amplify the DNA using primers 534R and 341F without a GC-clamp.
After sequencing, the results were compared with the GenBank from the National
The total phosphorus (TP) and P fractions were determined for compost samples
collected every 2 days. Extraction of TP, Olsen P, water soluble phosphorus (WSP) and
citric acid phosphorus (CAP) were performed following the procedure of Wei et al.
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(2015). The P concentration in the different extracts was assayed colorimetrically using
the ascorbic acid/molybdate reagent blue color method (Murphy and Riley, 1962).
Olsen P, WSP and CAP, extracted readily and moderately soluble compounds, which
are relatively active P pool and available to plants and microorganisms immediately or
in a long time (Li et al., 2011; Turner and Leytem, 2004). However, considering that
WSP could also be extracted in the method of both Olsen P and CAP, potential available
P (PAP) during composting was estimated as: Olsen P + CAP - WSP. The remaining P
fractions that could be not available P (NAP) were calculated as the difference between
TP and PAP.
All physical-chemical data were analyzed using Origin pro 8.0 and SPSS 19.0. The
DGGE images were analyzed for the relative intensity data of DNA bands in the gel.
The Shannon-Wiener Diversity Index was determined using Quantity one software
(version 4.5, Bio-Rad laboratories, USA). Canoco (version 5.0) was used for
and different addition treatments as well as P fractions. The length of the first detrended
correspondence analysis ordination axis was 2.2 for bacterial species data. Therefore,
community to treatments and assess the relationship between P fractions and the
bacterial community. The inter-species distances for the DGGE profiles were analyzed
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by forward manual selection and using 499 unrestricted Monte Carlo permutation tests
(Qiu et al., 2016). Statistical analyses were performed using Statistix 8 by the LSD
All-Pairwise Comparisons Test. The significant level of differences in the research was
set as p <0.05.
The succession of the cultivable bacterial and PSB populations during MSW
composting is illustrated in Table 2. On the one hand, the changes of bacteria and PSB
populations were similar during MSW composting. The amount of bacteria and PSB
phase, but decreased until the end of the trial, ranging from 4.5x107 to 8.5x108 CFU/g
for bacteria and from 1.25x106 to 1.07x107 CFU/g for PSB, respectively. On the other
hand, the counts of bacteria and PSB varied distinctly in different treatments. The
amounts of bacteria in CP was significantly lower than that in CK (p < 0.05) but the
amounts of PSB was significantly higher than in CK (p < 0.05) during composting, i.e.
notably increasing the proportion of PSB in bacteria (p < 0.05). The results suggested
that the addition of RP, mainly including high proportion acid-soluble P but hard to be
utilized directly for microbes (Wei et al., 2016b), may suppress bacterial growth but
activate potential PSB during composting, which may also depend on P status and
availability as the viewpoint of Mander et al. (2012). The abundance of bacterial and
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PSB at the end of composting in CMP1, CMP2 and CMP3 were higher than that in CK
and CP and that in CMP2 was the highest among the five groups, suggesting that
composite PSB may promote indigenous bacterial growth and adapt rapidly to
Bacteria PSB
Composts Mean cfu g-1 (x107) Mean cfu g-1 (x106)
0day 4day 10day 20day 0day 4day 10day 20day
CK 12.2± 0.8 55.3± 2.4 19.1± 3.3 6.8± 0.5 2.9± 0.3 3.8± 0.4 1.9± 0.2 1.3± 0.1
CP 8.0± 0.4 36.3± 2.8 12.2± 1.1 4.5± 0.3 4.2± 0.6 6.1± 0.5 3.6± 0.2 2.5± 0.1
CMP1 21.8± 2.1 84.6± 5.2 42.0± 2.2 13.3± 0.8 5.8± 0.4 10.7± 0.8 5.6± 0.3 4.0± 0.1
CMP2 15.7± 2.9 67.3± 8.5 53.3± 4.5 19.8± 1.4 5.2± 0.4 8.9± 0.7 7.8± 0.4 6.6± 0.3
CMP3 10.6± 1.7 45.7± 3.5 29.3± 1.8 11.7± 0.4 3.9± 0.1 5.9± 0.2 5.6± 0.4 4.2± 0.5
The bacterial DGGE patterns of 16S rDNA gene fragments were shown in Fig. 1 and
Fig. S2. The bacterial communities exhibited a significant difference between the same
compost of different ages and varied among different treatments. Forty-six different
bands were detected in the DGGE profile, and 33% of them except the inoculated PSB
bands were ubiquitous during MSW composting. The inoculated PSB bands except
band 10 were all detected in CK and CP and most of them were classified as Phylum
Firmicutes (Table S2), which have a relatively high abundance and survival time during
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composting. But three of the dominant PSB disappeared after the 10th day of
composting, i.e. band 33, 36 and 44, belonging to Proteobacteria and Actinobacteria,
matter). As the comprehensive parameters for microbial diversity, the changes of bands
numbers and Shannon-Wiener index for the DGGE profile were evaluated and shown in
Fig. 1. The trends of Shannon-Wiener index in all piles were similar to the changes seen
in bands numbers, which increased to a maximum value on the 10th day after
composting then fell until the end of composting. The mean value among different
treatments, ranging from about 21 to 33 for bands numbers and from 2.99 to 3.45 for
Shannon-Wiener index, was higher than that of Wang et al. (2015b), which may be the
result of more complex composition in MSW and PSB inoculation. To better compare
the similarity of bacterial community present in CK, CP, CMP1, CMP2 and CMP3, a
hierarchical cluster analysis based on UPGAMA was conducted (Fig. S3). The bacterial
cluster analysis showed that the similarity of five groups was above 70% in the same
day. This is possibly because same raw material contains a similar intrinsic microbial
community and the PSB agent is screened from composting samples. However, the
bacterial homology coefficient of samples in different days of composting was low, such
as 39% in that of samples from day 10 and 20. The above results suggest that PSB
inoculation may not inhibit indigenous microbial growth activities and diversity
pH, organic matter content, etc.) in different stages is more crucial that could lead to the
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bacterial community composition succession.
Fig. 1. The DGGE fingerprint diagram of bacterial community, bands numbers and
Shannon-Wiener index during composting for different treatments. Bands numbers and
TP content in all the composts exhibited a significant increase during composting for
20 days (Fig. 2a), which may be due to the “concentration effect” (Wei et al., 2015).
The concentration ranged from 5.8 to 10.9 g/kg for CK, from 7.2 to 13.7 g/kg for CP,
and from 7.1 to 18.7 g/kg for composts with PSB and RP addition. There were distinct
in the order: CMP2 > CMP3, CMP1 > CP > CK. This may be attributed due to the
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increased decomposition caused by the activation of microbial community related to
PSB inoculation.
Fig. 2c and Fig. 2e illustrates the concentrations of Olsen P and CAP in different
treatments. As the mobile and easily mineralizable fraction of P for plant use, the
to the values at the beginning of composting in all composts (p < 0.05). The final
amount of Olsen P varied from 4.2 to 8.1 g kg-1 (38.2-43.1% of TP). Olsen P content of
three inoculation groups was all significantly higher than that in CP and CK on the 20th
day (p < 0.05). The variation in CAP shows a similar uptrend to that observed for Olsen
P among all composts, whereas the ratio of CAP fraction relative to TP was higher than
Olsen P in the end of composting, ranging from 41.4% to 52.4% on average, highest for
CMP2, CMP3, and CMP1 (all above 50%) and lowest for CK. Moreover, the content of
CAP had a more obvious increase by around 75.4% in the 20th day compared with that
in the 8th day than the increase from day 0 to 8, especially in CMP3. The results might
be related to the suitable condition after the thermophilic phase of composting for the
activity of PSB to solubilize RP, particularly the exogenous inoculants. CAP was
closely correlated with the available P that can be used by crops from chemical
fertilizers, including labile and moderately labile P pool, which might be also related to
(Borggaard et al., 2005; Cheng et al., 2004). WSP is the phosphate in solution, which
could be regarded as the most bioaccessible and labile form of P (Siciliano et al., 2016).
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There was a gradual decrease from the beginning to the 8th day of composting and then
an increase in WSP content in all the treatments until the end of composting, the most
significant increase being found in CMP2, CMP3, CMP1 and CP (Fig. 2d). Combined
with the results shown in DGGE, the increase of WSP may be associated with
thermophilic phase of composting, which led to more demand for labile P. We suspect
that the need of WSP might stimulate inoculated or indigenous PSB for releasing
with RP. The WSP content on the 20th day of composting was lowest for CK (1.07 g
kg-1) and highest for CMP2, CMP3 and CMP1 (2.00 g kg-1, 1.84 g kg-1, 1.76 g kg-1,
proportion of WSP to TP during composting, ranging from 4.3% to 18.3%, which was
similar to the results reported by Wei et al. (2015), suggesting that RP and PSB
inoculation could enhance CAP and Olsen P but might not improve the ratio of WSP to
TP in MSW composts.
The distribution of PAP and NAP of samples at the initial and final stages of
increasing the potential availability of P, leading to the similar distribution in the end of
composting in different treatments, which is consistent with the earlier report of Ngo et
al. (2013). The proportion of PAP to TP was lower than NAP in the beginning of
composting, averaging just 45.4%, while PAP was the main fraction in the TP content
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in the end composting (above 69% on average) and a decrease of the more resistant
NAP occurred. There were distinct differences in the proportion of PAP to TP on day 20
of composting among different treatments, which increased in the order: CK < CP <
CMP1, CMP3 < CMP2 (p < 0.05). The RP enriched composts in CMP1, CMP2 and
CMP3 had significantly larger amounts of PAP, which may be a result of solubilization
of P by PSB inoculant. Low molecular weight organic acids (LOAs) are incompletely
(Reyes et al., 2006). Given that LOAs could dissolve the mineral phosphate in RP and
precipitates through chelation reactions and ligand exchange reactions with phosphate
anions and decreasing pH (Reyes et al., 2006; Guppy et al., 2005), the P-solubilization
by PSB inoculant is probably related to the production of LOAs. Moreover, the above
results suggest that there is little inhibition on the function and activity of composite
PSB inoculum when directly applied into MSW due to the source of PSB inoculants and
initial and cooling stages) could further accelerate the effective transformation of P in
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Fig. 2. Changes in TP and PAP in different treatment groups during composting. (a) TP
(total phosphorus) content; (b) Distribution of PAP (potential available phosphorus) and
NAP (not available phosphorus) ; (c) Olsen P (Olsen phosphorus) content; (d) WSP
There are many confounding factors that mask PSB inoculation effects under
linked to P forms variation (Wei et al., 2016a; Mander et al., 2012), we used constrained
RDA to test what extent the treatments including RP addition and PSB inoculation
affected the bacterial diversity firstly and then to determine which inoculation method
study (Fig. 3). Table S3 shows that the total variation in the species data explained by all
the external treatments accounted for 43.2% statistically. Both the addition of P (F value
= 3.6, p = 0.008) and PSB inoculation (F value = 2.9, p = 0.020) exerted highly
16
significant influences on the composting bacterial community structure as inferred from
Monte Carlo permutation tests. Although many previous studies have demonstrated the
symbiosis or inhibition (Zhao et al., 2016b; Xi et al., 2015), high P addition has rarely
which may stimulate microbial activity and respiration (Malik et al., 2012). The results
of others, suggested that inoculation for two times in both initial and cooling stages of
composting was clearly significant, solely explaining 19.6% (F value = 6.8, p = 0.004).
The above results also could explain the reason why the obvious differences of
microbial biomass and diversity among three inoculation method in the DGGE
fingerprint diagram.
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Fig. 3. RDA of bacterial community composition and treatments. Solid symbols indicate
the DGGE bands. Inoculation in the initial stage or cooling stage or both two stages of
treatments are indicated by solid lines (p < 0.05) while others with dashed lines are not
significant.
ordination graph where the first two principal components accounted for 84.06% of the
each composting stage but similar in different treatments since samples from each phase
were dispersed but mainly clustered into 3 groups in different areas of the ordination
18
graph in agreement with Fig. S3. Moreover, bacterial communities were significantly
related to TP and CAP based on forward selection (p < 0.01), and PAP is the most
important factor affecting community structure (Table S4), which could explain 45.6%
variance. However, Olsen P and WSP had little effect on community composition. Thus,
PAP, a new index for potential bio-available fraction of P taken by plant and
and the straight lines of different points representing samples in the ordination diagram
was considered according to Siciliano et al. (2016), it provided powerful new insights
into the comprehensive relationship between P forms, treatments and biological factors.
Different treatment based on inoculation methods had variable effects, with increase of
inoculated PSB amount in the beginning of composting (the line of CMP1-10 and
CP-10 and the line of CMP2-10 and CP-10) altering the communities at a smaller
included angle with the changes in PAP. In contrast, increase of inoculated PSB amount
in the cooling stages of composting (the line of CMP3-20 and CP-20 and the line of
CMP2-20 and CP-20) altered the microbial community at a larger angle with the PAP,
the ordination graph (Zhao et al., 2016b; Chen et al., 2014), two-stage inoculation of
PSB (both in the initial stage and the cooling stage) affected PAP by regulating
microbial community in composting and there is more demand for PSB inoculation in
19
the beginning of composting but less need in the cooling stage to accumulate PAP,
which may be attributed to more intense competition between PSB inoculants and
diverse stages. On the other hand, conscious of the effects of P status on abundance or
frequency of bacterial P-solubilization (Mander et al., 2012), the higher content of PAP
measured since the cooling phase of composting may link to the inhibition of growth
inoculation of PSB in the initial stage with higher inoculation amount and in the cooling
stage with lower inoculation amount was the most effective way to improve the
composting. The new insights for multivariate analytical methods could be used to
preliminarily evaluate other inoculants for finding suitable inoculation amount and stage
of composting.
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Fig. 4. Distance-based redundancy analysis (db-RDA) combined with principal
Significant parameters are indicated by solid lines (p < 0.05) while supplementary
parameters are shown using dashed lines. Solid symbols represent samples from the five
composts?
The aim of the regulating method for the distribution of P fractions of composts
described in Wei et al. (2016a) was not only to solubilize RP, but also to improve the
strategies, which could ultimately adjust the status of P fractions in different stages of
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composting based on the demand. However, considering that bacteria are more
influential due to their metabolic versatility, the potential activities of PSB do not
hypotheses have been presented on P cycle (Owen et al., 2015; Malik et al., 2012; Khan
and Joergensen, 2009; Borggaard et al., 2005; Guppy et al., 2005; Cheng et al., 2004), a
physicochemical ways in composts with the addition of RP and PSB is shown in Fig. 5.
Humic compounds as chemically reactive colloids are known to interact with inorganic
and organic components and metal ions, which could modify composting conditions for
microbial growth and activity (Zhao et al., 2017; Wei et al., 2007). Indications are also
present that some labile phosphate in solution is possibly converted into a fulvo-metal-P
participation of the metal cation (Urrutia et al., 2013; Cheng et al., 2004), even though
phosphate-accumulating organisms (Saito et al., 2004) are potentially present in the end
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of composting as the result of the abundant labile phosphate and capable of
biomass P (MBP) but have limited sorption. Therefore, the transformation showed by
red arrows in Fig. 5 could be considered the form of biological fixation of phosphates,
i.e., sorption of phosphates into the cellular material of microorganisms and yielding
soluble than the fixed Ca-, Fe- and Al-phosphates (Tan, 2014; Guppy et al., 2005).
These P may act as a long-term available pool of P that could be released slowly,
potentially being taken up by plants more efficiently during the process of biomass
turnover (Wei et al., 2016b; Khan and Joergensen, 2009). To reduce the possible
composts in the cooling stage of composting after PSB inoculation to transform some
phosphate in solution to MBP, (2) controlling the content of metal cation with the
compound according to the formation of humic matter, and (3) regulating the production
competition with phosphate since the cooling stage of composting. Further elucidation
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Fig. 5. Scheme showing the complex web of P transformation by biological and
physicochemical method within composts with the addition of RP and PSB. MBP,
microbial biomass phosphorus; LOAs, low molecular weight organic acids; MW,
molecular weight.
4. Conclusions
This study showed that inoculation with PSB during MSW composting could
increase PAP and improve bacterial community structure and function compared with
CK and CP. Mixed inoculation in the initial stage with higher inoculation amount and
cooling stage with lower inoculation amount had a clear advantage over inoculation in
any alone stage to enhance the solubilization and utilization of RP according to the new
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organisms, controlling the content of metal cation with the chelation capacity, and
Acknowledgements
This work was financially supported by the National Natural Science Foundation of
China (No. 51378097), the National Key Technology R&D Program (No.
2012BAJ21B02-02).
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