Beruflich Dokumente
Kultur Dokumente
NECK CANCERS
Evidence-Based Treatment
Athanassios Argiris, MD, PhD, FACP HEAD
AND NECK
Robert L. Ferris, MD, PhD, FACS
David I. Rosenthal, MD, FACR, FASTRO
CANCERS
including oropharyngeal cancer, cancer of the oral cavity, laryngeal cancer, nasopharyngeal
cancer, hypopharyngeal cancer, cancer of the sinuses and the skull base, salivary gland cancer,
and neck lymphadenopathy.
Section I of the book covers the most pertinent details on the epidemiology, biology,
diagnosis and staging of the disease including topics such as the genomic landscape of head
and neck squamous cell carcinoma and novel imaging modalities. Section II discusses the
evidence-based treatment modalities for conventional and novel chemotherapy regimens, the
evidence behind emerging radiation therapy techniques and the minimally invasive surgical
advances changing the landscape of care. The chapters in Section III are dedicated to Evidence-Based Treatment
site-specific management, including management guidelines, tables with FDA-approved
therapies and relevant ongoing clinical trials as well as instructive clinical cases with important
discussion on outcomes and follow-up care. Finally, Section IV focuses on recurrent and
metastatic disease and Section V provides the essentials on supportive care, including
managing the elderly, managing patients suffering from dysphagia and oral complications,
and must-know details of quality of life assessment and patient-reported outcomes.
Key Features:
n Includes didactic clinical cases for each type of head and neck cancer
n Numerous tables highlight FDA-approved therapies and ongoing clinical trials
n rovides evidence-based recommendations for treating head and neck cancers at
P
each stage of the disease with conventional and novel treatment strategies Athanassios Argiris
n Covers strategies for managing acute and late complications to treatment
Includes access to the fully-searchable downloadable ebook
Robert L. Ferris
David I. Rosenthal
n
Recommended
Shelving Category:
Oncology
11 W. 42nd Street
New York, NY 10036-8002
www.springerpub.com 9 780826 137777
This is a sample from HEAD AND NECK CANCERS: EVIDENCE-BASED TREATMENT
VISIT THIS BOOK S WEB PAGE BUY NOW
’
HEAD
AND NECK
CANCERS
HEAD
AND NECK
CANCERS
Evidence-Based Treatment
Editors
ISBN: 9780826137777
e-book ISBN: 9780826137784
All rights reserved. This book is protected by copyright. No part of it may be reproduced, stored in a retrieval
system, or transmitted in any form or by any means, electronic, mechanical, photocopying, recording, or
otherwise, without the prior written permission of the publisher.
Medicine is an ever-changing science. Research and clinical experience are continually expanding our
knowledge, in particular our understanding of proper treatment and drug therapy. The authors, editors, and
publisher have made every effort to ensure that all information in this book is in accordance with the state
of knowledge at the time of production of the book. Nevertheless, the authors, editors, and publisher are not
responsible for errors or omissions or for any consequences from application of the information in this book
and make no warranty, expressed or implied, with respect to the contents of the publication. Every reader
should examine carefully the package inserts accompanying each drug and should carefully check whether
the dosage schedules mentioned therein or the contraindications stated by the manufacturer differ from the
statements made in this book. Such examination is particularly important with drugs that are either rarely
used or have been newly released on the market.
Contents
15. Oral Cavity Cancer: Surgical 22. Locally Recurrent HNSCC: Salvage
Approaches and Postoperative Surgery, Reirradiation 403
Antoine Eskander, Sharon A. Spencer,
Treatment 271
Corey J. Langer, Takashi Maruo, Ryuichi Hayashi,
Antoine Eskander, Jacques Bernier, Lisa Licitra,
Sadamoto Zenda, and James W. Rocco
Paolo Bossi, and Theodoros N. Teknos
Contributors
Moran Amit, MD PhD, Fellow, Department of Head and Neck Surgery, Division of
Surgery, The University of MD Anderson Cancer Center, Houston, Texas
Paolo Bossi, MD, Head and Neck Medical Oncology Unit, Fondazione IRCCS
Istituto Nazionale Tumori, Milan, Italy
Ruud H. Brakenhoff, PhD, Professor of Head and Neck Cancer Genomics, Tumor
Biology Section, Department of Otolaryngology-Head and Neck Surgery, Cancer
Center Amsterdam, Amsterdam, the Netherlands
Steven B. Chinn, MD, MPH, Assistant Professor Head and Neck Surgical Oncology,
Department of Otolaryngology-Head and Neck Surgery, Head and Neck Surgical
Oncology, Microvascular Reconstructive Surgery, University of Michigan, Ann
Arbor, Michigan
Tomohiro Enokida, MD, PhD, Department of Head and Neck Medical Oncology,
National Cancer Center Hospital East, Kashiwa, Chiba, Japan
Farhoud Faraji, PhD, Medical Student, MD/PhD Program, Saint Louis University
School of Medicine, St. Louis, Missouri
Robert L. Ferris, MD, PhD, FACS, Director, UPMC Hillman Cancer Center; Hillman
Professor of Oncology; Associate Vice-Chancellor for Cancer Research; Co-Director,
Tumor Microenvironment Center; Professor of Otolaryngology, of Immunology, and
of Radiation Oncology, University of Pittsburgh, Pittsburgh, Pennsylvania
Neil D. Gross, MD, Professor, Department of Head and Neck Surgery, Division of
Surgery, The University of Texas MD Anderson Cancer Center, Houston, Texas
Missak Haigentz, Jr., MD, Section Chief of Oncology, Morristown Medical Center,
Atlantic Health System, Morristown, New Jersey; Adjunct Clinical Professor of
Medicine (Oncology) and Otorhinolaryngology-Head & Neck Surgery, Albert
Einstein College of Medicine, Bronx, New York
Ryuichi Hayashi, MD, Department of Head and Neck Surgery, National Cancer
Center Hospital East, Kashiwa, Chiba, Japan
F. Christopher Holsinger, MD, FACS, Professor and Chief, Division of Head and
Neck Surgery, Department of Otolaryngology-Head and Neck Surgery, Stanford
University Medical Center, Palo Alto, California
Lisa Ann Kachnic, MD, FASTRO, Professor and Cornelius Vanderbilt Chair of
Radiation Oncology, Department of Radiation Oncology, Vanderbilt University
Medical Center, Nashville, Tennessee
Rajesh V. Lalla, DDS, PhD, Associate Professor, Section of Oral Medicine; Associate
Dean for Research, University of Connecticut School of Dental Medicine, Farmington,
Connecticut
Corey J. Langer, MD, FACP, Professor of Medicine at the Hospital of the University
of Pennsylvania, Department of Medicine, Division of Hematology Oncology, Penn
Medicine, Philadelphia, Pennsylvania
Jae Lee, MD, PhD, Clinical Resident, Department of Radiation Oncology, University
of Michigan, Ann Arbor, Michigan
Nancy Y. Lee, MD, Vice Chair, Department of Radiation Oncology; Service Chief,
Head and Neck Radiation Oncology; Director, Proton Therapy, Memorial Sloan
Kettering Cancer Center, New York, New York
Jan S. Lewin, PhD, Professor, Department of Head and Neck Surgery, Chief, Section
of Speech Pathology and Audiology, The University of Texas MD Anderson Cancer
Center, Houston, Texas
Lisa Licitra, MD, Head and Neck Medical Oncology Unit, Fondazione IRCCS Istituto
Nazionale Tumori, Milan, Italy
Derrick T. Lin, MD, FACS, Chief, Division of Head and Neck Oncology, Massachusetts
Eye and Ear Infirmary, Clinical Surgical Director, Center for Head and Neck Cancers,
Massachusetts General Hospital; Co-Director, Cranial Base Center, Massachusetts Eye
and Ear Infirmary/Massachusetts General Hospital; Daniel Miller Associate Professor of
Otolaryngology, Harvard Medical School, Boston, Massachusetts
Jon Mallen-St. Clair, MD, PhD, Attending Surgeon, Head and Neck Oncologic and
Microvascular Reconstructive Surgery, Cedars-Sinai Medical Group, Los Angeles,
California
Takashi Maruo, MD, PhD, Department of Head and Neck Surgery, National Cancer
Center Hospital East, Kashiwa, Chiba, Japan
Loren K. Mell, MD, Chief, Head and Neck Malignancy Service; Associate Professor,
Department of Radiation Medicine and Applied Sciences, Moores Cancer Center,
University of California San Diego, La Jolla, California
Wai Tong Ng, MD, Consultant, Department of Clinical Oncology, Pamela Youde
Nethersole Eastern Hospital, Hong Kong
Susumu Okano, MD, PhD, Department of Head and Neck Medical Oncology,
National Cancer Center Hospital East, Kashiwa, Chiba, Japan
Douglas E. Peterson, DMD, PhD, Professor and Chair, Section of Oral Medicine,
University of Connecticut School of Dental Medicine, Farmington, Connecticut
Nabil F. Saba, MD, FACP, Professor, Hematology and Medical Oncology, Emory
University School of Medicine; Director, Head and Neck Medical Oncology Program,
Winship Cancer Institute of Emory University, Atlanta, Georgia
Emmanuel Seront, MD, PhD, Medical Oncologist, Institut Roi Albert II, Service
d’Oncologie Médicale, Cliniques Universitaires Saint-Luc and Institut de Recherche
Clinique et Expérimentale (Pole MIRO), Université Catholique de Louvain, Brussels,
Belgium; Service d’Oncologie Médicale, Centre Hospitalier de Jolimont, Haine Saint
Paul, Belgium
Sharon A. Spencer, MD, Professor and Chief of Medical Services, Hazelrig Salter
Radiation Oncology Center, Department of Radiation Oncology—University of
Alabama at Birmingham School of Medicine, Birmingham, Alabama
Erich M. Sturgis, MD, MPH, Professor, Department of Head and Neck Surgery,
Division of Surgery, The University of Texas MD Anderson Cancer Center,
Houston, Texas
Makoto Tahara, MD, PhD, Department of Head and Neck Medical Oncology,
National Cancer Center Hospital East, Kashiwa, Chiba, Japan
C. Jillian Tsai, MD, PhD, Director, Head and Neck Radiation Oncology Research,
Memorial Sloan Kettering Cancer Center, New York, New York
Steffen Wagner, Dr. rer. nat., Group Leader, Head and Neck Cancer Research,
Department of Otorhinolaryngology, Head and Neck Surgery, University of Giessen,
Giessen, Germany
Randal S. Weber, MD, Chief Patient Experience Officer; Professor of Head and
Neck Surgery, Department of Head and Neck Surgery, The University of Texas MD
Anderson Cancer Center, Houston, Texas
Jose P. Zevallos, MD, MPH, Joseph B. Kimbrough Professor of Head and Neck
Surgery, Department of Otolaryngology/Head and Neck Surgery, Washington
University School of Medicine, St. Louis, Missouri
Preface
Head and neck cancers are challenging diseases into consideration long-term treatment effects.
that require complex management and exem- A major breakthrough worth reiterating has
plify the value of collaboration among multiple been the introduction of immunotherapy as a
specialties. Very appropriately, we the Editors standard therapy that establishes the signifi-
are representatives of each of the three major cance of host immune response in the initiation
treatment modalities. The genesis of this work and progression of squamous cell carcinoma
was driven by recognition that, despite evolu- of the head and neck. Taken together, these
tion in various approaches and new emerging developments provide the basis and justify the
data, high quality clinical care is optimal when timely publication of “Head and Neck Cancers:
there is mutual respect of each other’s discipline, Evidence-Based Treatment”.
and when each patient has a treatment recom- This textbook captures key advances and
mendation made by multidisciplinary input. aims to become a quick and handy reference
When discussing the need for a new text- tool for head and neck cancer management
book we recognized and agreed that critical issues, and features didactic patient cases in
developments have been transforming the field each site-specific management chapter. We
of head and neck oncology. Indeed, in the past anticipate that physicians involved in the care
few years there have been significant advances of these patients will find the material rele-
in our understanding of the molecular biol- vant to their clinical practice. Evidence-based
ogy, immune evasion, and genetic landscape of approaches are emphasized throughout the
head and neck cancers, as well as the multidis- textbook. The chapters have been authored
ciplinary management of these malignancies, by internationally recognized experts, with a
including immunotherapy, targeted therapies, focus on multi-modality representation. We are
precision radiation therapy, robotic surgery, thankful and much obliged to their diligent and
and supportive care capabilities. With the rising thoughtful contributions.
epidemic of human papillomavirus-associated Finally, we owe a debt of gratitude to our
oropharyngeal cancer, customizing treatment patients. Their journeys and life stories are
is of utmost importance, in particular taking teaching us to become better doctors.
Share
Head and Neck Cancers: Evidence-Based Treatment
3
The Genomic Landscape
of HNSCC
Steffen Wagner
Jens P. Klussmann
Ruud H. Brakenhoff
Since modern cancer genomics was initi- The very large majority of head and neck can-
ated by large-scale Sanger sequencing of can- cers (>90%) are SCCs that arise in the mucosal
cer genomes (10), and emerged rapidly by linings of the upper aerodigestive tract, and in a
single cell type, suggesting that it is a relatively epidemiology, health management, and clinical
homogeneous disease. However, HNSCC is a purposes. Nine subsites of head and neck can-
remarkably heterogeneous disease, and this cer are distinguished according to anatomical
led to several subclassifications of the disease localization and molecular properties (p16INK4A
in relation to anatomy, etiology, and clinical expression and HPV status) of the disease (12).
or molecular characteristics. Some of these are In Table 3.1 the major subsites of head and
overlapping. In this section, we describe these neck cancers are listed including correspond-
classifications and take one as the main topic in ing International Classification of Diseases for
the subsequent chapter. Oncology, third edition (ICD-O-3) codes and
the further molecular subclassification in the
case of oropharyngeal and hypopharyngeal
ANATOMICAL CLASSIFICATION OF
cancer.
HEAD AND NECK CANCERS BY SUBSITE
In consideration of risk factors, each subsite
In combination with histology (morphology) has its particular set of usually more than one
obtained from microscopic tumor examina- environmental factor that contributes to the
tion, anatomical classification is used routinely genetic alterations associated with carcinogene-
in cancer registries to describe the kind (mor- sis. For example, sunlight exposure is more rel-
phology, behavior, and grading) and origin evant for cancers of the lip than for laryngeal or
of neoplasms, which can be used as tool for oropharyngeal cancers, for which lifestyle factors
TABLE 3.1
The Major Sites of Head and Neck Cancer With Corresponding ICD-O-3 Codes and
Molecular Subclassification
1 Lip and oral cavity C00.0-6, C00.8-9, C02.0-3, C02.8-9, C03.0-1, C03.9,
C04.0-1, C05.0, C05.8-9, C06.0-2, C06.8-9
such as tobacco and alcohol exposure or viral expression profile, the other clusters correlated
infection have the highest impact. HPV-related less well with the former studies. This could
tumors are typically found in the oropharynx illustrate the heterogeneity of HNSCC regard-
and even more particularly in the tonsils, which ing gene expression, but may also indicate dif-
is discussed in more detail in the following. ferences in collecting and processing of samples
In summary, head and neck cancers are and the used profiling platforms. However, an
diverse concerning anatomical localization and important finding of this study was that the
contributing risk factors. The current knowl- samples containing transcriptionally inactive
edge shows that HPV-related cancers in the HPV16 DNA shared characteristics with HPV-
head and neck region are primarily localized negative samples regarding gene expression and
within the oropharynx, mainly within the ton- frequency of TP53 mutations, indicating that
sil (13). Up to a certain extent, HPV-negative the presence of HPV16 DNA is not indicative
cancers of the oropharynx might be very com- for a role of the virus. Further, the so-called
parable to nonoropharyngeal head and neck disruptive TP53 mutations and an immune
cancers, but HPV-related cancers of the oro- response–related gene expression cluster were
pharynx are a true distinct disease entity, and associated with lymph node metastasis, inde-
classification on the basis of HPV status is the pendent of HPV status (19).
leading topic in this chapter. Five subtypes of HNSCC, including two
biologically distinct HPV subtypes, were iden-
tified by Keck and coworkers in 2015 in a
SUBTYPES IN HNSCC BASED
clinically homogeneous cohort of 134 locore-
ON GENE EXPRESSION
gionally advanced HNSCCs with 44% HPV-
Initially microarray hybridizations and later positive tumors. All patients were treated
RNA sequencing studies allowed research- with concurrent chemoradiotherapy. Gene
ers to identify all genes in a tissue that are expression profiling was done using Agilent
expressed. These gene expression profiles have 4x44Kv2 expression arrays and combined with
been explored in different tumor types includ- previously published and publicly available
ing HNSCC by several groups. In 2004, four data, generating a final dataset of more than
expression subtypes were defined in HNSCC 900 patients. One of the subtypes showed an
by cDNA microarray hybridization, resembling immune and mesenchymal phenotype and con-
those in lung cancer found before (14,15). In a tained both HPV-positive and HPV-negative
later study, four comparable profiles were iden- tumors, while the other subgroup resembled the
tified using Agilent 44K microarrays, and these classical expression pattern according to prior
groups were classified and termed as basal, mes- nomenclature in other cancer types and molec-
enchymal, atypical, and classical gene expres- ular characteristics (20–22), but also contained
sion subtypes (16). While HPV status was not both HPV-positive and HPV-negative tumors.
included in the earlier study, an enrichment of A basal expression subgroup encompassed the
HPV-associated gene expression was observed remaining HPV-negative samples with signifi-
in the atypical subtype with elevated expression cant enrichment of hypoxia-responsive genes
of CDKN2A, LIG1, and the transcription fac- (e.g. HIF1A, CA9, and VEGF), neuregulin sig-
tor RPA2 (16,17). The basal gene expression naling (including EGFR, AREG NRG1), and
profile showed signatures found in basal cells overexpression of epithelial marker genes like
from airway epithelium (e.g., high COL17A1 P-cadherin (CDH3) and cytokeratins (KRT1,
expression associated with the extracellular KRT9). In contrast to the basal expression
matrix production, and high TGFA, EGFR, subgroup, both HPV-positive subtypes showed
and TP63 expression) (16,18). Genes associ- low expression and no copy number events for
ated with epithelial-to-mesenchymal transition EGFR/HER ligands (23).
(EMT), mesenchymal markers, and transcrip- Several gene expression signatures have been
tion/growth factors were enriched in the mes- established from microarray and RNA-Seq
enchymal subtype, while genes enriched in the studies. However, none of these approaches
classical subtype were associated with expo- could be implemented in the standard of care
sure to cigarette smoke, xenobiotic metabolism for HNSCC so far. A recent study demonstrates
genes, and transcription factors (16). Also four the use of formalin-fixed paraffin embedded
subtypes were identified in a third study using (FFPE) oropharyngeal squamous cell carci-
Illumina Expression BeadChips (19). Although noma (OPSCC) tumor tissue for mutation and
one cluster closely matched the classical gene transcriptional profiling by using Ion Torrent
AmpliSeq cancer panel tNGS and NanoString and its prevalence varies between 0.1 and 0.5%
gene expression assays (24). In this pilot study, (27,28). The standard policy is to treat the
230 cancer-relevant genes were analyzed in lesion when possible and analyze the specimen
four HPV-positive and four HPV-negative or a biopsy by microscopic examination for
samples. The expression of several genes was dysplasia, graded as mild, moderate, or severe.
highly likely to correlate with HPV status (e.g. Although consensus criteria have been defined
WNT1, PDGFA, and OGG1). Further, by by the World Health Organization (WHO),
unsupervised hierarchical clustering six groups it remains problematic to make an objective
of differentially expressed genes were identified categorization of dysplasia owing to a high
in this dataset. Technical replicates of this gene inter- and intraobserver variation. Patients are
expression study proved a reproducible pattern subsequently monitored by active surveillance
of gene expression for each tumor with respect and biopsy on indication.
to the underlying biology (24) and it may be The percentage of oral leukoplakias that
assumed that the ability to use FFPE samples develop into cancer depends on various factors
will advance gene expression studies. such as the study population, the definition of
The expression profiling either by protein leukoplakia used, and the length of the obser-
or RNA expression suggests differential ben- vation time, but an annual transformation rate
efit of target specific therapies for different of 1% to 2% per year is a reasonable assump-
patient groups with HNSCC. Tumors with tion (26). Risk factors for progression are
high and amplified levels of EGFR may qualify female gender, size, and the presence and grade
for cetuximab treatment. Especially in sight of of dysplasia.
current antibody-based therapies, this might be Besides these recognizable lesions in the
of translational importance and further efforts mucosal linings, it has been well established that
are needed for biomarker development and mucosal abnormalities may exist that are only
improvement of personalized care for patients visible under the microscope. When tumors are
with HNSCC in the future. diagnosed and excised, the specimen is trans-
In summary, there are several ways to clas- ferred to the pathology laboratory to perform
sify head and neck tumors, based on anatom- definitive staging and investigate the surgical
ical subsite, based on gene expression profiles, margins for tumor invasion. The pathologist also
but most prominent at present is the classifica- scores for changes in the mucosal epithelium,
tion on the basis of HPV status, at least in the and grades these as mild, moderate, or severe
oropharynx. HPV-positive tumors are different dysplasia. Particularly severe dysplasia is con-
at the molecular level and show a very differ- sidered as a preneoplastic change in the mucosal
ent clinical behavior, which recently led to an epithelium. Already in 1953, the term “field can-
adaptation in the staging (25) and clinical tri- cerization” was proposed to describe these dys-
als to de-intensify therapy. The role of HPV in plastic changes that might also explain the high
nonoropharyngeal tumors is less clear, but all propensity that local recurrences develop after
in all we separate HNSCC primarily in HPV- HNSCC treatment and the high risk that multi-
negative and HPV-positive tumors, and discuss ple independent tumors develop in the mucosal
the genomic landscape likewise. linings of the upper aerodigestive tract (29).
In the nineties, these precancerous changes
were comprehensively studied with genetic
HPV-NEGATIVE AND markers, and it was shown that the number of
HPV-POSITIVE HNSCC: genetic changes runs more or less in parallel to
CARCINOGENESIS the severity of the lesions. This led to the first
genetic progression model of head and neck
cancer (2). Loss of heterozygosity at chromo-
HPV-NEGATIVE TUMORS
somes 3p, 9p, and 17p appeared to occur in
Most HNSCC patients present with tumors de dysplasia, apparently reflecting early carcino-
novo. However, there are precancerous lesions genesis, while other alterations at 11q, 4q, and
in the mucosal linings of the upper aerodiges- 8 were typically present in carcinomas, likely
tive tract that are either white (leukoplakia) corresponding to a relatively late phase in
or red (erythroplakia) areas of the mucosa. carcinogenesis.
These lesions may progress and develop into These genetic markers were employed to
SCCs (26). Leukoplakia is the most common study the presence of genetically altered muco-
precursor lesion of oral squamous carcinomas sal epithelial cells, also coined as “fields” in
relation to the field cancerization concept of The initial genetic progression model, later
Slaughter et al. (29). Indeed many more pre- adapted and simplified, are elementary linear
malignant changes characterized by tumor-as- models (3). However, the plethora of new can-
sociated genetic changes were observed, and didate cancer genes that are mutated in HNSCC
shown to be clinically relevant as they formed will make these simple linear models much
an important source of local recurrences and more complex and diverse, and the research
second primary tumors at least in surgically field has to deal with the fact that there are
treated patients (30–32). Most recent stud- likely multiple ways that lead to mucosal epi-
ies have identified these same genetic changes thelial cell transformation.
at chromosome arms 3p and 9p together with In most recent molecular profiling studies it
mutations in TP53 as the best predictors of was shown that another subgroup of tumors
malignant transformation in leukoplakia (33) exists that is characterized by very few copy
and in surgical margins (34). number alterations. This subgroup of HPV-
The tumor suppressor gene on chromosome negative and TP53 wild type tumors typically
arm 9p is CDKN2A encoding the p16INK4A displays HRAS and CASP8 mutations and a
protein, which binds and disrupts the cyclinD/ more favorable prognosis (7). In previous stud-
CDK4-6 complex that drives cells through the ies, it was shown that this group is diploid, pro-
G1-S checkpoint. The p16INK4A cell cycle inhibit- ficient in DNA mismatch repair and seems to
ing protein is frequently inactivated in HNSCC occur more frequently in females without a his-
by mutation or methylation in combination with tory of smoking and alcohol consumption (39).
chromosomal loss, or by homozygous deletion
(7,68). On chromosome 17p13 the TP53 gene
HPV-POSITIVE TUMORS
is located that is also frequently inactivated in
HNSCC, mostly by missense mutations com- HPV infection causes a subgroup of tumors,
bined with allelic loss. Somatic mutations are most particularly those arising in the orophar-
found in 60% to 80% of the tumors (7,35–37). ynx. HPV-positive OPSCCs form a separate
Hence, there is quite some information on the disease entity that led to an adapted staging
precancerous fields and the molecular changes system (25). In addition, several studies to
in these fields, although more detailed DNA de-escalate therapy have been initiated and
sequencing data are still lacking. the results are awaited. Most assays to test
Furthermore, there is only very limited for HPV in tumor specimen are based on the
data on what precedes the development of detection of viral DNA. There are many HPV
these fields. Van Houten et al. described small types that may cause cancer, but most prom-
p53-positive focal patches in tumor-adjacent inent is HPV16, particularly in the head and
mucosal epithelium (35), and showed that neck region. As mentioned earlier, the virus
these indeed contained mutations, but not encodes two oncogenes E6 and E7. The E7
related to the index tumor of these patients. protein binds the pocket proteins pRb, P130,
These mutated p53-positive patches were con- and p107 thereby creating an S-phase envi-
sidered equivalent to the “clones” or “clonal ronment in the cell. Usually an unscheduled
units” and defined as a family of daughter S-phase with high E2F activity causes p53
cells that originate from an adult stem cell activation by p14 inhibition of MDM2 and
that makes up that part of the squamous epi- induction of apoptosis, and therefore the virus
thelium, and that has now become detectable expresses the oncoprotein E6 that targets p53
by the mutation in p53. These p53 mutated for degradation. Hence, the virus hits pre-
clonal units were considered to represent the cisely the same pathways as is noted in HPV-
first oncogenic changes in the mucosa, and negative tumors: the p53–p21 pathway and
formed together with the genetically defined the p16–cyclinD1–Rb pathway. Typically in
fields the basis of the hypothetical patch– HPV-positive tumors, p16INK4A is active and
field–tumor–metastasis progression model for often overexpressed, while cyclinD1 at 11q13
HNSCC development (3). This model was is not amplified and p53 is wild type (7,40,41).
deduced from the existing descriptive studies Hence, at the genetic level, most prominent in
but recent data in engineered mouse models HPV-positive tumors is the absence of TP53
support such a model. By Axin2 lineage trac- mutations as well as the absence of the loss of
ing experiments the stem cells and the patches chromosome arms 3p and 9p and the amplifi-
they form have been shown recently, at least in cation of 11q13, while these changes are very
mouse skin (38). common in HPV-negative tumors.
Both E6 and E7 expression remains critical oropharynx are surrounded by large fields of
in HPV-positive HNSCC cell lines (42) and infected cells, a surrogate for the fields of genet-
the cancer-associated phenotype caused by ically altered cells that precede HPV-negative
inactivation of the p53 and pRb pathways in tumors. It was assumed that HPV infection is
oropharyngeal keratinocytes is at least cellular the first carcinogenic event in HPV-positive
immortalization (43). This phenotype would tumors, as it is in the cervix, and that HPV
also fit with the timing of the genetic events early presence and E6 transcripts could be used to
in the progression of HPV-negative HNSCC as study the presence of these fields surrounding
abrogation of the p53 and pRb pathways by HPV-positive tumors. Remarkably, in none of
loss of 9p21, the location of CDKN2A as well the analyzed tumor-free surgical margins E6
as TP53 mutations are frequently found in the transcripts could be detected. Again, strongly
precursor fields (2,30,44), and are considered suggesting that HPV-induced field canceriza-
as the earliest genetic changes. In HPV-positive tion seems not to occur in the upper aerodi-
HNSCC these same pathways are likely also gestive tract. Alternatively, HPV infection may
the first to be inactivated by the viral E6 and also not be the first carcinogenic event (49). In
E7 oncoproteins, strongly suggesting that HPV contrast to HPV-mediated carcinogenesis in the
infection is indeed the initial carcinogenic event cervix that can be followed by inspection and
as it is in cervical cancer (45). biopsies of the acetowhite lesions, there are at
The key precursor lesions in the mucosal lin- present no indications for HPV-related precan-
ings are leukoplakias, and it was therefore log- cerous changes in the upper aerodigestive tract.
ical to study HPV presence in these lesions, but Hence, the molecular pathogenesis of HPV-
the results are highly discordant. A major prob- induced squamous cancers in the upper aerodi-
lem in the different studies is the false positive gestive tract remains unsolved, and currently
results by the applied ultrasensitive HPV DNA relies on the extrapolation of data collected in
assays. Most reliable studies suggest a very low the invasive carcinomas.
prevalence of less than 1%; this is reviewed by
Ha and Califano (46). Given the second obser-
vation that 3p and 9p losses of heterozygosity
are the key genetic changes predicting malignant HPV-NEGATIVE AND HPV-
transformation of leukoplakias (33), although POSITIVE HNSCC: PROTEIN
these alterations are typically absent in HPV- EXPRESSION, GENETICS, AND
positive tumors (40), we consider progressing EPIGENETICS
leukoplakia lesions as being HPV-negative, and
they should not be considered the precursor A most interesting feature of head and neck
lesion of HPV-mediated carcinogenesis. cancers in comparison to other tumor entities is
Are there any other indications for HPV- the existence of virus and chemical agent driven
induced precancerous changes in the upper cancer within one anatomically well-defined
aerodigestive tract? They are very common sublocalization (the oropharynx) in a some-
in the cervix, and in fact the target lesion for what balanced numerical ratio. For example,
screening (45). The highest attributable fraction in lung cancer, smoking is the dominant risk
of HPV in the head and neck is found in the ton- factor while viral infection is negligible. In
sils, and therefore both precancerous changes contrast, almost 100% of cervical carcinomas
and sites of infection are expected in the ton- are associated with HPV infection. During the
sils. Several studies have been carried out with past year it became evident that HPV-related
the largest reporting on over 4,000 tonsils of OPSCCs are a distinct entity with characteristic
which over 3,300 could be analyzed. No HPV molecular and clinical features such as superior
was found (47). Hence, the precursor lesions of survival of patients. Consequently, it was to be
HPV-driven carcinogenesis in the upper aerodi- expected that HPV was introduced for classifi-
gestive tract are still an enigma. There have cation of oropharyngeal cancer in the latest ver-
been indications that tonsillar cancers may be sion of American Joint Committee on Cancer
surrounded by p16INK4A-positive mucosal fields, (AJCC) staging albeit HPV status is determined
but these might have been superficially growing only by p16INK4A immunostaining as a surrogate
tumors and without proper genetic analysis of and not in combination with HPV testing (12).
these lesions this remains unclear (48). The choice to rely on p16INK4A immunos-
Finally, it was also studied using HPV taining was that it is easier to standardize com-
assays whether HPV-positive tumors in the pared to viral oncogene (mainly E6 and E7)
mRNA detection, and that it is a good although expression is usually detectable in the majority
not perfect surrogate marker. Overexpression (>70%) of tumor cells by immunohistochemis-
of p16INK4A protein is indirectly linked to the try, with a strong, diffuse expression pattern in
oncogenetic activity of HPV encoded protein both nucleus and cytoplasm (classical pattern of
E7. In contrast, CDKN2A, the gene encoding HPV-induced transformation) (48,50,53,54).
p16INK4A, it is one of the most frequently inacti- Inactivation of retinoblastoma (Rb) by the HPV
vated tumor suppressor genes in HPV-negative E7 oncoprotein overcomes cell cycle arrest and
tumors (50,51). E7 enhances p16INK4A expression by inducing
epigenetic changes (55). However, it has to
DIFFERENTIAL PROTEIN be mentioned that HPV-independent p16INK4A
EXPRESSION IN HPV-POSITIVE overexpression is described for different can-
AND HPV-NEGATIVE HNSCC cers and about 5% of oropharyngeal cancers
The most prominent protein markers in (50), probably by alternative alterations in the
HNSCC include p53, EGFR, and VEGF. The p16-signaling pathway (e.g., inactivation of
53 kDa nuclear phosphoprotein p53 is coded retinoblastoma). Previous studies have shown
by the tumor suppressor gene TP53. It is one of that respective disadvantages of HPV detection
the most important tumor suppressors involved by polymerase chain reaction (PCR; low spec-
in DNA synthesis/repair and programmed cell ificity) or by p16INK4A immunohistochemistry
death and, when activated, inhibits the cell cycle (HPV-independent overexpression) can be ruled
by induction of p21. Expression of p53 is usu- out by the combination of both techniques.
ally not detected in healthy cells owing to its
MUTATIONS AND COPY-NUMBER
short half-life, but it is frequently observed in
ABERRATION (CNA) PROFILES
cancer cells. Accumulation of p53 occurs by
enhanced expression upon cellular stress, for Complex karyotypes are frequent in HNSCC,
example, induction by carcinogenic processes. including several numeric and structural alter-
However, several mutational hot spots within ations. A high variability and heterogeneity
TP53 in cancer cells have been identified, which among cells indicates selection processes and
lead to mutated protein with abrogated tumor clonal evolution in HNSCC. This led to one of
suppression function. Therefore, selection pro- the first genetic progression models for HNSCC,
cesses cause tumor cells to accumulate TP53 in which chromosomal changes (gains, losses,
mutations. Although not fully understood, the and translocations) accumulate in an ordered
consequence of more TP53 mutations/higher manner with resulting growth advantage of a
p53 expression level could be a worse progno- favored cell population (2). In a 2014 review,
sis. These findings are superimposed by effects cytogenetic aberrations in HNSCC have been
of HPV-induced carcinogenesis, and right now, summarized (56).
it is unclear whether TP53 mutations have The current knowledge indicates that cer-
prognostic impact independently from HPV tain genetic alterations are shared by HNSCC
status. Some studies do report this (52), but the irrespective of HPV status, while others are
studied cohorts are somewhat small and based restricted to either HPV-negative or HPV-
on heterogeneous patient populations. HPV- positive HNSCC (57). This has been largely con-
positive tumors rarely contain TP53 mutations firmed by data from The Cancer Genome Atlas
compared to HPV-negative tumors (40) and (TCGA) consortium. For example, amplifica-
prognosis is usually better. Although pointing tion of the 3q26-28 region, containing PIK3CA,
in the same direction, underlying mechanisms TP63, and SOX2 are frequent to both (7).
differ. In HPV-driven cancers, viral E6 oncopro- Deletion (14%) or mutation (8%) of TRAF3
tein expression impedes p53 function via bind- (tumor necrosis factor receptor–associated fac-
ing and recruitment of ubiquitinating proteins tor 3), which is involved in innate and acquired
and labeling p53 for proteasomal degradation. antiviral immune response, was found in high
Therefore, no selection pressure to acquire frequency in HPV-positive HNSCC (7). In this
TP53 mutations exists in HPV-driven can- context, higher mutation rates in CYLD (cylin-
cers. However, as already mentioned another dromatosis lysine 63 deubiquitinase) have also
protein marker (p16INK4A) is overexpressed in been identified in HPV-positive HNSCC and
HPV-related cancers. The p16INK4A tumor sup- both aberrations correlated with NFkB (nuclear
pressor protein is generally inactivated by muta- factor kappa-light-chain-enhancer of activated
tion, methylation, and losses in HPV-negative B cells) activation, episomal HPV status of
tumors. In HPV-driven tumors, p16 INK4A tumors, and improved patient survival (58).
Amplifications of EGFR and FGFR1 appear to Among the best known and highly validated
be restricted to HPV-negative HNSCC, which is differences between HPV-negative and HPV-
confirmed by other studies (7,59–61). positive HNSCC are somatic mutations in the
A comparison of HPV-positive and HPV- TP53 gene, which are found in 60% to 80% of
negative tumors was done for mutations and HPV-negative but are virtually absent in HPV-
CNAs in 617 cancer-associated genes in 120 positive tumors (7,35–37). This reflects the low
matched tumor/normal samples (42.5% HPV- selection pressure to acquire TP53 mutations in
positive tumors) (62). In contrast to the general HPV-positive cancers due to p53 inactivation
expectation, mutational burden did not differ by the HPV E6 oncoprotein.
between HPV positive and HPV negative. The Although the majority of HNSCCs are either
mutational spectrum of HPV-negative tumors driven by HPV or harbor TP53 mutations, a
resembles that of published lung SCC anal- remaining 20% cases seem to have p53 wild
yses with high mutation frequency in TP53, type (39). It might be that other genes in the
CDKN2A, MLL2, CUL3, NSD1, PIK3CA, p53 pathway are altered in selected cases (66)
and NOTCH genes. In HPV-positive tumors or that p53-independent tracks of malignant
a unique profile with high mutation rates in progression are followed. For example, this
DDX3X, FGFR2/3 and aberrations in PIK3CA, subgroup of HPV-negative and TP53 wild
KRAS, MLL2/3, and NOTCH1 was found (62). type tumors typically show HRAS and CASP8
A most important progress in recent years mutations, as was recently shown by molecular
was the publication of 279 head and neck can- profiling studies (7).
cer genomes characterized by next-generation HPV-driven tumors with E6 transcription
sequencing and array analysis by TCGA con- were shown to have a different genetic pattern
sortium (7). In this dataset, 36 cases were identi- (e.g., absence of chromosome arms 3p, 9p loss,
fied to be HPV positive. The analysis confirmed and 11q13 amplification) compared to HPV-
differential genetic patterns described earlier. negative HNSCC with respect to loss of hetero-
Further, frequent structural changes in TRAF3, zygosity analysis and microarray comparative
a gene at chromosomal region 14q32 and fre- genomic hybridization (40,41,67). The genes
quently involved in antiviral immune responses located at 9p and 11q13 are CDKN2A and
were found in HPV-positive tumors. In contrast, CCND1, and both are established cancer genes
amplifications of EGFR and FGFR1 appear to in HPV-negative HNSCC and often affected by
be restricted to HPV-negative HNSCC (7,59– genetic alterations (7,41,68). In HPV-positive
61). TpC mutations were found more frequent HNSCC, chromosomal instability seems to be
in HPV-positive tumors, although the total associated with HPV DNA integration into the
number of somatic mutations was not differ- host´s genome and, albeit being linked to can-
ent between HPV-positive and HPV-negative cer progression in general, is associated with
tumors. Missense mutations in PIK3CA cod- favorable prognosis in tonsillar cancer (69).
ing for the catalytic subunit of PI3-kinase were In the classical view of HPV-related carcino-
identified in HPV-positive tumors as well as genesis, integration of the viral DNA into the
amplifications of E2F1. PI3-kinase activity acti- host genome disrupts control of E6 and E7 activ-
vates AKT signaling and PIK3CA mutations ity by inactivating E2 protein by linearizing the
in HPV-positive tumors have been reported HPV genome within this E2 coding open read-
before [e.g., in 8/33 HPV-positive tumors ana- ing frame. Although this model appears to be
lyzed (63)]. Data from TCGA and other studies reasonable, in an analysis of 73 HPV-associated
have recently been summarized to describe the OPSCCs, episome-derived PCR products were
genetic landscape of HPV-associated HNSCC, only detected for more than 60% of samples
including structural alterations, mutation sig- (70). Also, HNSCC cell line analysis indicated
natures, viral integration, and their relation to that viral oncogene expression was independent
cellular pathways (64). of viral copy number and the presence of viral
Although latest sequencing results are a integration. One of the studied cell lines did not
great progress for cancer research, one has to show HPV DNA integration at all, indicating
mention that total numbers of analyzed sam- that HPV DNA integration is not a necessary
ples are still small. For example, the aforemen- event in carcinogenesis (71). Very recently,
tioned mutation in KRAS was found in 5.8% of RNA-Seq and whole genome sequence data
HPV-positive tumors (3/51 patients) (62), and from TCGA HNSCC samples were analyzed for
this finding could not be validated in another the possible HPV genome states (episomal only,
study (65). integrated state, and a state in which the viral
genome exists as a hybrid episome with human MiRNAs are the best studied noncoding
DNA). All three states were split relatively RNAs involved in gene regulation since their
evenly and more strikingly, about three quarters discovery in 1993 (86). After their processing
of HPV16-positive HNSCC contain episomal from 60 to 70 nucleotide, long hairpin-like
viral genomes (72). precursors, miRNAs are incorporated together
with DICER1 and Argonaute (AGO) proteins
in the miRNA-induced silencing complex
EPIGENETICS AND miRNAS
(miRISC). This complex is guided by sequence
Epigenetic alterations, either DNA methyla- complementary of the miRNA to its target
tion or histone modifications of viral and host mRNAs, and causing gene suppression by tar-
genomes, are two important processes effecting geted mRNA degradation and translational
gene expression. Especially the role of DNA repression. Although altered miRNA expres-
methylation in HPV-positive OPSCC is well sion is known in various cancers and carcino-
established, and affects not only pathogenesis genic processes, invasion and metastasis, less
of OPSCC but also clinical behavior of tumors. is known in head and neck cancer. A definite
Gene promoter methylation often causes tran- conclusion from the large-scale profiling studies
scriptional silencing of tumor suppressor genes is hampered by the fact that miRNAs do not
involved in DNA damage repair, detoxifica- have “one” target and one function. Because
tion, cell cycle regulation, and apoptosis, and of their small size of about 22 bases, miRNA
may be as important as inactivation of genes by may bind to more or less conserved target
deletion or somatic mutation (73,74). sequences and target genes themselves can
Viral E2 protein expression and binding to have several binding sites for one or different
E2 binding sites (E2BSs) in the viral genome are miRNAs. This generates rather complex net-
important regulators of E6 and E7 expression works of molecular interactions regulated by
during the normal HPV life cycle. Loss of E2 miRNAs. Although only partially documented,
function during carcinogenesis is considered a most cellular pathways involved in carcinogen-
prerequisite for consistent activation of viral esis of head and neck cancers are influenced by
oncogene expression and malignant transfor- miRNA regulation.
mation (75). Methylation marks at E2BS in Several differentially expressed miRNAs
the upstream regulatory region of E6 and E7 have been described until now for HPV-negative
regulate transcription in the presence of intact and -positive HNSCC and with the technical
E2 expression, which is particularly import- progress, their number and reliability of data
ant in tumors with episomal (nonintegrated) will certainly rise. Hsa-miR-363 is among the
HPV (76,77). Distinct patterns of DNA meth- best known miRNAs found to be upregulated
ylation in the host genome are described for in HPV-positive compared to HPV-negative
viral driven cancers including HPV (78–80). HNSCCs (87–89). Among others, its pre-
Since DNA methylation profiles persist or even dicted target sequences are within CDKN1A
increase during disease progression, this is of (cyclin-dependent kinase inhibitor 1), CASP3
particular clinical relevance. A trend toward (Caspase-3), and CD274 (programmed cell
a higher level of gene promoter methylation death 1 ligand 1), indicating regulatory func-
in HPV-related as compared to HPV-negative tion in apoptosis, cell cycle, transcriptional
OPSCC was shown, which is most likely due to regulation, and immunity. Downregulation
accelerated expression and enzymatic activity in HPV-positive compared to HPV-negative
of DNA methyltransferases (DNMTs) (80–84). HNSCC was reported for hsa-miR-125a, -143,
In patients with HPV-associated SCCs distinct -145, -199a, -126, -181b, and -31 in at least
subgroups were identified based on viral DNA two studies each (87–91). The most prominent
integration and the E2BS methylation status, target genes are: CD34 (hematopoietic progeni-
causally linked with viral oncogene expression tor cell antigen CD34), CDKN1A, TP53 (p53),
(70,76,77). Recently, a methylation signature ERBB2 (receptor tyrosine-protein kinase erbB-
for HPV-related cancers was determined based 2), KRAS (GTPase KRas), SOX2 (transcrip-
on quantitative evaluation of differentially tion factor SOX-2), MET (hepatocyte growth
methylated regions in the proximal promoter factor receptor), MTOR (serine/threonine-pro-
of five host genes (ALDH1A2, OSR2, IRX4, tein kinase mTOR), HIF1A (hypoxia-inducible
GRIA4, and GATA4), predicting the clinical factor 1-alpha), VEGFA (vascular endothelial
outcome of HNSCC patients, including HPV- growth factor A), PIK3R2 (phosphatidylinosi-
related OPSCC (78,85). tol 3-kinase regulatory subunit beta), TERT
(telomerase reverse transcriptase), BCL2 (apop- tissue and impact of environmental factors
tosis regulator Bcl-2), and FOXP3 (forkhead (chemicals, radiation, or carcinogenic viruses),
box protein P3). Other miRNAs reported in at a basic set of pathways seems comparable for
least two studies are hsa-miR-26b, -29a, -155, most cancers. Generally, proliferation and cel-
and -222 (87–91). Predicted target sequences lular survival are increased, while cell cycle
are within genes already mentioned or with control is changed, and DNA-repair and linked
similar important functions. However, expres- apoptotic programs are suppressed (Figure
sion data are conflicting for these miRNAs 3.1). This is achieved by the action of the major
indicating the need for further investigations in HPV oncoproteins E6 and E7 in HPV-induced
this field of gene regulation. Although miRNA carcinogenesis, and is independent from inac-
regulation is highly complex, miRNAs may tivation of anticancer sentinels like p53 on
serve as diagnostic and prognostic markers and the genetic level. Further steps involve dedif-
miRNA-mediated gene regulation could be the ferentiation of tumor cells and activation of
target of future therapy concepts. immune escape mechanisms. Downregulation
of HLA-A and –B alleles has been reported for
HPV-driven cancers in 1995 (92) and recent
sequencing data point to enrichment of muta-
HPV-NEGATIVE AND HPV- tions in HLA and beta-2-microglobulin genes
POSITIVE HNSCC: ALTERED in HPV-positive HNSCC (7). This is particu-
PATHWAYS larly interesting, since attraction and activa-
tion of CD56+ natural killer cells is expected by
For development and progression of every HLA I loss and higher numbers of CD56+ natu-
malignant disease, a critical set of cellular path- ral killer cells were reported in HPV-associated
ways has to be dysregulated. Although involved OPSCC recently, and correlate with improved
factors may differ depending on the originating survival independently from HPV status (93).
HPV
Altered pathways
16
in HPV+ve HNSCC
E7 E6
RB1 p53
surface molecules NFkB
HLA-A
HLA-B MYC E2F1
B2M immuno
-logy cell cycle control
apoptosis
senescence
membrane receptors
EGFR PI3K-
ERBB2 signaling inflammation
FGFR3 angiogenesis
NFkB migration
TNFR
LTBR
CYLD
TRAF3 p63
cellular
differentiation
NOTCH
100% 0% 100%
activation inactivation
inactivated tumor suppressor genes, which are 16. Walter V, Yin X, Wilkerson MD, et al. Molecular sub-
no direct targets, enforcing the exploration of types in head and neck cancer exhibit distinct patterns
other strategies. But new opportunities have of chromosomal gain and loss of canonical cancer
genes. PLOS ONE. 2013;8:e56823.
emerged. Head and neck cancers belong to the
17. Slebos RJ, Yi Y, Ely K, et al. Gene expression differ-
group of tumors with a relatively high muta- ences associated with human papillomavirus status in
tional load, which may make them susceptible head and neck squamous cell carcinoma. Clin Cancer
to immunotherapies. Thus far, treatment is Res. 2006;12:701–709.
still mainly based on stage and site, and not on 18. Hackett NR, Shaykhiev R, Walters MS, et al. The
genetic or other molecular classifications. This human airway epithelial basal cell transcriptome.
may change on short notice for the oropharyn- PLOS ONE. 2011;6:e18378.
geal tumors that are caused by HPV. 19. Wichmann G, Rosolowski M, Krohn K, et al. The
role of HPV RNA transcription, immune response-re-
lated gene expression and disruptive TP53 muta-
tions in diagnostic and prognostic profiling of head
REFERENCES and neck cancer. Int J Cancer. 2015;137:2846–
2857.
1. Fearon ER, Vogelstein B. A genetic model for col- 20. Verhaak RG, Hoadley KA, Purdom E, et al. An inte-
orectal tumorigenesis. Cell. 1990;61:759–767. grated genomic analysis identifies clinically relevant
doi:10.1016/0092-8674(90)90186-I subtypes of glioblastoma characterized by abnormali-
2. Califano J, van der Riet P, Westra W, et al. Genetic ties in PDGFRA, IDH1, EGFR, and NF1. Cancer Cell.
progression model for head and neck cancer: 2010;17:98–110.
implications for field cancerization. Cancer Res. 21. Wilkerson MD, Yin X, Hoadley KA, et al. Lung squa-
1996;56:2488–2492. mous cell carcinoma mRNA expression subtypes are
3. Leemans CR, Braakhuis BJ, Brakenhoff RH. The reproducible, clinically important, and correspond to
molecular biology of head and neck cancer. Nat Rev normal cell types. Clin Cancer Res. 2010;16:4864–
Cancer. 2011;11:9–22. 4875.
4. Tomasetti C, Vogelstein B. Cancer etiology. Variation 22. Sørlie T, Tibshirani R, Parker J, et al. Repeated
in cancer risk among tissues can be explained by the observation of breast tumor subtypes in independent
number of stem cell divisions. Science. 2015;347:78–81. gene expression data sets. Proc Natl Acad Sci USA.
5. Bartkova J, Hořejší Z, Koed K, et al. DNA damage 2003;100:8418–8423.
response as a candidate anti-cancer barrier in early 23. Keck MK, Zuo Z, Khattri A, et al. Integrative analysis
human tumorigenesis. Nature. 2005;434:864–870. of head and neck cancer identifies two biologically dis-
6. van Harn T, Foijer F, van Vugt M, et al. Loss of Rb tinct HPV and three non-HPV subtypes. Clin Cancer
proteins causes genomic instability in the absence of Res. 2015;21:870–881.
mitogenic signaling. Genes Dev. 2010;24:1377–1388. 24. Saba NF, Wilson M, Doho G, et al. Mutation and
7. Cancer Genome Atlas Network. Comprehensive transcriptional profiling of formalin-fixed paraffin
genomic characterization of head and neck squamous embedded specimens as companion methods to immu-
cell carcinomas. Nature. 2015;517:576–582. nohistochemistry for determining therapeutic targets
8. Allis CD, Jenuwein T. The molecular hallmarks of epi- in oropharyngeal squamous cell carcinoma (OPSCC):
genetic control. Nat Rev Genet. 2016;17:487–500. a pilot of proof of principle. Head Neck Pathol.
9. Lin S, Gregory RI. MicroRNA biogenesis pathways in 2015;9:223–235.
cancer. Nat Rev Cancer. 2015;15:321–333. 25. O’Sullivan B, Huang SH, Su J, et al. Development
10. Wood LD, Parsons DW, Jones S, et al. The genomic and validation of a staging system for HPV-related
landscapes of human breast and colorectal cancers. oropharyngeal cancer by the International Collabo-
Science. 2007;318:1108–13. ration on Oropharyngeal cancer Network for Staging
11. Lawrence MS, Stojanov P, Polak P, et al. Mutational (ICON-S): a multicentre cohort study. Lancet Oncol.
heterogeneity in cancer and the search for new can- 2016;17:440–451.
cer-associated genes. Nature. 2013;499:214–218. 26. Brouns E, Baart J, Karagozoglu K, et al. Malignant
12. Amin MB, Edge S, Greene F, et al. eds. AJCC Cancer transformation of oral leukoplakia in a well-defined
Staging Manual (8th ed). New York, NY: Springer; 2017. cohort of 144 patients. Oral Dis. 2014;20:e19–e24.
13. Klussmann JP, Weissenborn SJ, Wieland U, et al. Prev- 27. Napier SS, Speight PM. Natural history of potentially
alence, distribution, and viral load of human papil- malignant oral lesions and conditions: an overview of
lomavirus 16 DNA in tonsillar carcinomas. Cancer. the literature. J Oral Pathol Med. 2008;37:1–10.
2001;92:2875–2884. 28. van der Waal I. Potentially malignant disorders of the
14. Garber ME, Troyanskaya OG, Schluens K, et al. oral and oropharyngeal mucosa; terminology, classi-
Diversity of gene expression in adenocarcinoma of the fication and present concepts of management. Oral
lung. Proc Natl Acad Sci USA. 2001;98:13784–13789. Oncol. 2009;45:317–323.
15. Chung CH, Parker JS, Karaca G, et al. Molecular 29. Slaughter DP, Southwick HW, Smejkal W. Field can-
classification of head and neck squamous cell carci- cerization in oral stratified squamous epithelium;
nomas using patterns of gene expression. Cancer Cell. clinical implications of multicentric origin. Cancer.
2004;5:489–500. 1953;6:963–968.
30. Tabor MP, Brakenhoff RH, van Houten VM, et al. 45. Steenbergen RD, Snijders PJ, Heideman DA, Meijer
Persistence of genetically altered fields in head and CJ. Clinical implications of (epi)genetic changes in
neck cancer patients: biological and clinical implica- HPV-induced cervical precancerous lesions. Nat Rev
tions. Clin Cancer Res. 2001;7:1523–1532. Cancer. 2014;14:395–405.
31. Tabor MP, Brakenhoff RH, Ruijter-Schippers HJ, et 46. Ha PK, Califano JA. The role of human papilloma-
al. Genetically altered fields as origin of locally recur- virus in oral carcinogenesis. Crit Rev Oral Biol Med.
rent head and neck cancer: a retrospective study. Clin 2004;15:188–196.
Cancer Res. 2004;10:3607–3613. 47. Palmer E, Newcombe RG, Green AC, et al. Human
32. Tabor MP, Brakenhoff RH, Ruijter-Schippers HJ, et papillomavirus infection is rare in nonmalignant tonsil
al. Multiple head and neck tumors frequently origi- tissue in the UK: implications for tonsil cancer precur-
nate from a single preneoplastic lesion. Am J Pathol. sor lesions. Int J Cancer. 2014;135:2437–2443.
2002;161:1051–1060. 48. Mooren JJ, Gultekin SE, Straetmans JM, et al.
33. Zhang L, Poh CF, Williams M, et al. Loss of hetero- P16(INK4A) immunostaining is a strong indicator for
zygosity (LOH) profiles—validated risk predictors for high-risk-HPV-associated oropharyngeal carcinomas
progression to oral cancer. Cancer Prev Res (Phila). and dysplasias, but is unreliable to predict low-risk-
2012;5:1081–1089. HPV-infection in head and neck papillomas and laryn-
34. Graveland AP, Golusinski PJ, Buijze M, et al. Loss geal dysplasias. Int J Cancer. 2014;134:2108–2117.
of heterozygosity at 9p and p53 immunopositiv- 49. Rietbergen MM, Braakhuis BJ, Moukhtari N, et al.
ity in surgical margins predict local relapse in head No evidence for active human papillomavirus (HPV)
and neck squamous cell carcinoma. Int J Cancer. in fields surrounding HPV-positive oropharyngeal
2011;128:1852–1859. tumors. J Oral Pathol Med. 2014;43:137–142.
35. van Houten VM, Tabor MP, van den Brekel MW, et al. 50. Prigge ES, Toth C, Dyckhoff G, et al. p16INK4a/Ki-67
Mutated p53 as a molecular marker for the diagnosis co-expression specifically identifies transformed
of head and neck cancer. J Pathol. 2002;198:476–486. cells in the head and neck region. Int J Cancer.
36. Balz V, Scheckenbach K, Götte K, et al. Is the p53 2015;136:1589–1599.
inactivation frequency in squamous cell carcinomas 51. Gültekin SE, Sengüven B, Klussmann JP, Dienes HP.
of the head and neck underestimated? Analysis of P16INK 4a and Ki-67 expression in human papilloma
p53 exons 2-11 and human papillomavirus 16/18 E6 virus-related head and neck mucosal lesions. Invest
transcripts in 123 unselected tumor specimens. Cancer Clin. 2015;56:47–59.
Res. 2003;63:1188–1191. 52. Lindenbergh-van der Plas M, Brakenhoff RH, Kuik
37. Poeta ML, Manola J, Goldwasser MA, et al. TP53 DJ, et al. Prognostic significance of truncating TP53
mutations and survival in squamous-cell carcinoma of mutations in head and neck squamous cell carcinoma.
the head and neck. N Engl J Med. 2007;357:2552– Clin Cancer Res. 2011;17:3733–3741.
2561. 53. Reuschenbach M, Roos J, Panayotopoulos D, et
38. Lim X, Tan SH, Koh WLC, et al. Interfollicular epi- al. Characterization of squamous cell cancers of the
dermal stem cells self-renew via autocrine Wnt signal- vulvar anterior fourchette by human papillomavi-
ing. Science. 2013;342:1226–1230. rus, p16INK4a, and p53. J Low Genit Tract Dis.
39. Smeets SJ, Brakenhoff RH, Ylstra B, et al. Genetic 2013;17:289–297.
classification of oral and oropharyngeal carcinomas 54. Klussmann JP, Gültekin E, Weissenborn SJ, et al.
identifies subgroups with a different prognosis. Cell Expression of p16 protein identifies a distinct entity of
Oncol. 2009;31:291–300. tonsillar carcinomas associated with human papillo-
40. Braakhuis BJM, Snijders PJF, Keune W-JH, et al. mavirus. Am J Pathol. 2003;162:747–753.
Genetic patterns in head and neck cancers that contain 55. McLaughlin-Drubin ME, Park D, Munger K. Tumor
or lack transcriptionally active human papillomavirus. suppressor p16INK4A is necessary for survival of cer-
J Natl Cancer Inst. 2004;96:998–1006. vical carcinoma cell lines. Proc Natl Acad Sci USA.
41. Smeets SJ, Braakhuis BJ, Abbas S, et al. Genome- 2013;110:16175–16180.
wide DNA copy number alterations in head and neck 56. Gollin SM. Cytogenetic alterations and their molecu-
squamous cell carcinomas with or without onco- lar genetic correlates in head and neck squamous cell
gene-expressing human papillomavirus. Oncogene. carcinoma: a next generation window to the biology of
2006;25:2558–2564. disease. Genes Chromosomes Cancer. 2014;53:972–
42. Rampias T, Sasaki C, Weinberger P, Psyrri A. E6 990.
and e7 gene silencing and transformed phenotype of 57. Wagner S, Würdemann N, Hübbers C, et al. HPV-as-
human papillomavirus 16-positive oropharyngeal can- soziierte kopf-hals-carzinome: mutationssignaturen
cer cells. J Natl Cancer Inst. 2009;101:412–423. und genomische abberrationen [HPV-associated head
43. Smeets SJ, van der Plas M, Schaaij-Visser TB, et al. and neck cancer: mutational signature and genomic
Immortalization of oral keratinocytes by functional aberrations]. HNO. 2015;63:758–767.
inactivation of the p53 and pRb pathways. Int J Can- 58. Hajek M, Sewell A, Kaech S, et al. TRAF3/CYLD
cer. 2011;128:1596–1605. mutations identify a distinct subset of human papillo-
44. Braakhuis BJ, Tabor MP, Kummer JA, et al. A genetic mavirus-associated head and neck squamous cell carci-
explanation of Slaughter’s concept of field canceriza- noma. Cancer. 2017;123:1778–1790.
tion: evidence and clinical implications. Cancer Res. 59. Agrawal N, Frederick MJ, Pickering CR, et al. Exome
2003;63:1727–1730. sequencing of head and neck squamous cell carcinoma
reveals inactivating mutations in NOTCH1. Science. 75. Thierry F. Transcriptional regulation of the pap-
2011;333:1154–1157. illomavirus oncogenes by cellular and viral tran-
60. Stransky N, Egloff AM, Tward AD, et al. The muta- scription factors in cervical carcinoma. Virology.
tional landscape of head and neck squamous cell carci- 2009;384:375–379.
noma. Science. 2011;333:1157–1160. 76. Chaiwongkot A, Vinokurova S, Pientong C, et al. Dif-
61. Lechner M, Frampton GM, Fenton T, et al. Targeted ferential methylation of E2 binding sites in episomal and
next-generation sequencing of head and neck squa- integrated HPV 16 genomes in preinvasive and invasive
mous cell carcinoma identifies novel genetic alterations cervical lesions. Int J Cancer. 2013;132:2087–2094.
in HPV+ and HPV- tumors. Genome Med. 2013;5:49. 77. Reuschenbach M, Huebbers CU, Prigge ES, et al.
62. Seiwert TY, Zuo Z, Keck MK, et al. Integrative and Methylation status of HPV16 E2-binding sites classi-
comparative genomic analysis of HPV-positive and fies subtypes of HPV-associated oropharyngeal can-
HPV-negative head and neck squamous cell carcino- cers. Cancer. 2015;121:1966–1976.
mas. Clin Cancer Res. 2015;21:632–641. 78. Kostareli E, Holzinger D, Bogatyrova O, Hielscher T,
63. Sewell A, Brown B, Biktasova A, et al. Reverse-phase et al. HPV-related methylation signature predicts sur-
protein array profiling of oropharyngeal cancer vival in oropharyngeal squamous cell carcinomas. J
and significance of PIK3CA mutations in HPV-as- Clin Invest. 2013;123:2488–2501.
sociated head and neck cancer. Clin Cancer Res. 79. Minarovits J, Demcsak A, Banati F, Niller HH. Epi-
2014;20:2300–2311. genetic dysregulation in virus-associated neoplasms.
64. Hayes DN, Van Waes C, Seiwert TY. Genetic land- Adv Exp Med Biol. 2016;879:71–90.
scape of human papillomavirus-associated head 80. Lechner M, Fenton T, West J, et al. Identification and
and neck cancer and comparison to tobacco-related functional validation of HPV-mediated hypermeth-
tumors. J Clin Oncol. 2015;33:3227–3234. ylation in head and neck squamous cell carcinoma.
65. Prigge E-S, Urban K, Stiegler S, et al. No evidence of Genome Med. 2013;5:15.
oncogenic KRAS mutations in squamous cell carcino- 81. Sartor MA, Dolinoy DC, Jones TR, et al. Genome-
mas of the anogenital tract and head and neck region wide methylation and expression differences in
independent of human papillomavirus and p16INK4a HPV(+) and HPV(-) squamous cell carcinoma cell lines
status. Hum Pathol. 2014;45:2347–2354. are consistent with divergent mechanisms of carcino-
66. Berns K, Hijmans EM, Mullenders J, et al. A large-scale genesis. Epigenetics. 2011;6:777–7787.
RNAi screen in human cells identifies new components 82. Lleras RA, Smith RV, Adrien LR, et al. Unique DNA
of the p53 pathway. Nature. 2004;428:431–437. methylation loci distinguish anatomic site and HPV
67. Klussmann JP, Mooren JJ, Lehnen M, et al. Genetic status in head and neck squamous cell carcinoma. Clin
signatures of HPV-related and unrelated oropharyn- Cancer Res. 2013;19:5444–5455.
geal carcinoma and their prognostic implications. Clin 83. Schlecht NF, Ben-Dayan M, Anayannis N, et al. Epi-
Cancer Res. 2009;15:1779–1786. genetic changes in the CDKN2A locus are associ-
68. Reed AL, Califano J, Cairns P, et al. High frequency ated with differential expression of P16INK4A and
of p16 (CDKN2/MTS-1/INK4A) inactivation in P14ARF in HPV-positive oropharyngeal squamous
head and neck squamous cell carcinoma. Cancer Res. cell carcinoma. Cancer Med. 2015;4:342–353.
1996;56:3630–3633. 84. Chalertpet K, Pakdeechaidan W, Patel V, et al.
69. Mooren JJ, Kremer B, Claessen SM, et al. Chromosome Human papillomavirus type 16 E7 oncoprotein
stability in tonsillar squamous cell carcinoma is associ- mediates CCNA1 promoter methylation. Cancer Sci.
ated with HPV16 integration and indicates a favorable 2015;106:1333–1340.
prognosis. Int J Cancer. 2013;132:1781–1789. 85. Kostareli E, Hielscher T, Zucknick M, et al. Gene
70. Olthof NC, Speel EJ, Kolligs J, et al. Comprehensive promoter methylation signature predicts survival of
analysis of HPV16 integration in OSCC reveals no head and neck squamous cell carcinoma patients. Epi-
significant impact of physical status on viral oncogene genetics. 2016;11:61–73.
and virally disrupted human gene expression. PLOS 86. Lee RC, Feinbaum RL, Ambros V. The C. ele-
ONE. 2014;9:e88718. gans heterochronic gene lin-4 encodes small RNAs
71. Olthof NC, Huebbers CU, Kolligs J, et al. Viral load, with antisense complementarity to lin-14. Cell.
gene expression and mapping of viral integration sites 1993;75:843–854.
in HPV16-associated HNSCC cell lines. Int J Cancer. 87. Lajer CB, Nielsen FC, Friis-Hansen L, et al. Different
2015;136:E207–E218. miRNA signatures of oral and pharyngeal squamous
72. Nulton TJ, Olex AL, Dozmorov M, et al. Analysis of cell carcinomas: a prospective translational study. Br J
the cancer genome atlas sequencing data reveals novel Cancer. 2011;104:830–840.
properties of the human papillomavirus 16 genome in 88. Lajer CB, Garnaes E, Friis-Hansen L, et al. The role
head and neck squamous cell carcinoma. Oncotarget. of miRNAs in human papilloma virus (HPV)-asso-
2017;8(11):17684–17699. ciated cancers: bridging between HPV-related head
73. Rodriguez-Paredes M, Esteller M. Cancer epi- and neck cancer and cervical cancer. Br J Cancer.
genetics reaches mainstream oncology. Nat Med. 2012;106:1526–1534.
2011;17:330–339. 89. Wald AI, Hoskins EE, Wells SI, et al. Alteration of
74. Azad N, Zahnow CA, Rudin CM, Baylin SB. The microRNA profiles in squamous cell carcinoma of the
future of epigenetic therapy in solid tumours—lessons head and neck cell lines by human papillomavirus.
from the past. Nat Rev Clin Oncol. 2013;10:256–266. Head Neck. 2011;33:504–512.
90. Miller DL, Davis JW, Taylor KH, et al. Identifica- significance in oropharyngeal squamous cell carci-
tion of a human papillomavirus-associated oncogenic noma. Int J Cancer. 2016;138:2263–2273.
miRNA panel in human oropharyngeal squamous 94. Geiger JL, Grandis JR, Bauman JE. The STAT3 path-
cell carcinoma validated by bioinformatics analysis way as a therapeutic target in head and neck cancer:
of the Cancer Genome Atlas. Am J Pathol. 2015;185: Barriers and innovations. Oral Oncol. 2016;56:84–92.
679–692. 95. Parsel SM, Grandis JR, Thomas SM. Nucleic acid
91. Gao G, Gay HA, Chernock RD, et al. A microRNA targeting: towards personalized therapy for head and
expression signature for the prognosis of oropharyngeal neck cancer. Oncogene. 2016;35:3217–3226.
squamous cell carcinoma. Cancer. 2013;119:72–80. 96. Ausoni S, Boscolo-Rizzo P, Singh B, et al. Targeting
92. Keating PJ, Cromme FV, Duggan-Keen M, et al. Fre- cellular and molecular drivers of head and neck squa-
quency of down-regulation of individual HLA-A and mous cell carcinoma: current options and emerging
-B alleles in cervical carcinomas in relation to TAP-1 perspectives. Cancer Metastasis Rev. 2016;35:413–
expression. Br J Cancer. 1995;72:405–411. 426.
93. Wagner S, Wittekindt C, Reuschenbach M, et al. 97. Moser R, Xu C, Kao M, et al. Functional kinomics
CD56-positive lymphocyte infiltration in relation to identifies candidate therapeutic targets in head and
human papillomavirus association and prognostic neck cancer. Clin Cancer Res. 2014;20:4274–4288.