Beruflich Dokumente
Kultur Dokumente
DAMPENING THE
INFLAMMATORY
RESPONSE TO
BACTERIAL INFECTIONS
D
TABLE OF CONTENTS
ABOUT CBR PUBLISHED BY
Knowledge Translation Committee
DESIGNERS
RESEARCH EVENTS
Dr. Stefanie Mak & Andy Hsu
The CBR aims to improve the health and well-being
Clotting & AbCellera Biologics
4 11
CONTRIBUTORS
of patients through innovative research in blood and Amardeep Singh Sekhon
Dr. Amy Glenwright* Alzheimer's Disease Visit
blood-related processes. Amy Wong Strilchuk
Andy Hsu
Iron Chelation
5 13 Canadian Science
Bronwyn Lyons
Corrie Belanger
Cristyn Fung
Dr. Erika Siren* Therapy Policy Conference
Eva Yap
Fennie Easton van der Graaf
Innate Defense
8 16 Girls & STEAM
Ido Rafaeli*
• Improve the quality and safety of blood J. Andrew Alexander*
product collection, storage and delivery Katharine Sedivy-Haley*
Lily Takeuchi Regulator Peptides Symposium
• Create new knowledge to better treat Morgan Alford
bleeding and clotting disorders S. Soroush Nasseri
Walking the
9 18, 20 Norman Bethune
Sarah Bowers*
• Develop novel approaches to Shawna Stanwood*
modulate the immune system to
Sreeparna Vappala
Dr. Stefanie Mak*
Tightrope Symposium
Patient-driven. Innovative. Community. treat inflammation and infections and Dr. Stefanie Novakowski
Victor Lei
25 ISH 2018
BLOG cbr.ubc.ca
transfusions – only a few examples among many pioneering discoveries. FACEBOOK @cbrubc
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34 From Scientists to
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The KT Committee publishes weekly at
CBR News (cbr.ubc.ca) and covers a wide range
of topics, from recent research highlights and 35 Magazine
Contest
Cover Art
CBR Education Commitment
12 Keystone Symposia:
opinion pieces on science and academia, to
24 Neil Mackenzie
30 APipeline
Plug for the Leaky
Tel: 604.822.4252 | Email: ed.conway@ubc.ca development opportunities for our
Knowledge
trainees Translation Mentorship Award
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Science beyond academia
2 3
Research Research
also link beta-amyloid to fibrin, leading to stiffer clots. This leads to the following chelation. More specifically, iron chelation efficiency depends
question, is beta-amyloid a normal component of blood clots in the brain, on the biodegradable linkages used in conjugation. For example, more
or could its incorporation into clots contribute to CAA? stable conjugates that have a high degree of linkage require more time to
be broken down and are associated with prolonged iron excretion from
the liver and kidneys. All conjugates presently studied in vitro degraded
4 5
Research Awards
E ach year, the University of British Columbia Faculty of Science awards the
Excellence in Service Awards to a maximum of six staff (including one
Postdoctoral Fellow or Research Associate), two faculty members and two students
2018 UBC Science
in the entire student body. These awards recognize those who bring exceptional
and positive contributions to their faculty and reward their outstanding service. Excellence in Service
Award Recipient:
Congratulations to Dr. Erika Siren, a recent graduate from the Kizhakkedathu
lab who received this prestigious award in late 2018! She’s now continuing her
education as a Friedman Scholar at Harvard Medical School.
Dr. Erika Siren was credited for going above and beyond to provide support
within her interdisciplinary field of biomaterials chemistry, increasing its visibility
Dr. Erika Siren
and accessibility and collaborations within the university. Outside the lab, Erika
was also actively involved in science outreach during her PhD through initiatives
at Science World and Café Scientifique.
Many of Erika’s contributions were through the Centre for Blood Research,
including the CBR Knowledge Translation Committee, of which she was a
founding member. Erika worked as a science writer throughout her PhD; indeed,
her articles were featured in Biotechnology Focus, the Vancouver Sun and the
Self-propelled Hemostatic Particles Find a New Financial Post. Reflecting on her time at the CBR, Erika notes that “the CBR
provided a really unique graduate school experience where I was encouraged to
Home in Gauze and Spray Cartridges contribute to science in more ways than research alone. Many of the initiatives I
participated in during grad school could not have been done without the financial
and administrative support from the CBR”.
Congrats Erika! C
By AMY WONG STRILCHUK, PhD Candidate, Kastrup Lab
Profiles
6 7
Research Research
Image credit: U.S. Centers for Disease Control and Prevention
I magine, you are walking on a tightrope. If you fall to one side of this narrow line, zombies are waiting to eat you up. On the
other side, it is a fall into a crazy deep canyon. Terrifying, isn’t it? However, there is good news! By having the perfect con-
cert of one’s movement, balance and coordination, the tightrope can be mastered. Just like walking the tightrope; our bodies
carefully coordinate blood cells and clotting molecules in the blood vessels to achieve a perfect balance between bleeding and
clotting. However, disruption of this balance can lead to either excessive bleeding or undesirable clotting.
Efforts to decipher how blood orchestrates this balance between bleeding and clotting at a molecular level began in
Dampening the Inflammatory Response to mid-20th century. The early models of blood clotting were described by Davie, Ratnoff, and Macfarlane in 1964. They showed
how the sequential cleavage of certain blood proteases, convert the liquid blood into a gel like clot. Although these models
P. aeruginosa Infection using a Synthetic critically advanced our knowledge of the diseases caused by most clotting factor deficiencies, they were unable to explain
several clinical and experimental observations. For example, these models couldn’t explain why people with FXI deficiency
were prone to bleeding compared to people with FXII deficiency. Further research on these observations bridged the gaps in
Immunomodulatory Peptide these models and has led to a better description of clot formation. Thus, the clot formation paradigm is no longer considered
a linear sequence of proteolytic events that generate the final protease, thrombin, penultimate to clot production. The current
By DR. GEORGINA BUTLER, Research Associate, Overall Lab understanding involves a complex interplay of cells in the vasculature and plasma clotting molecules. This interplay is regu-
lated by multiple feedback mechanisms resulting in properly balanced clot formation.
Recently, a review article in the Journal of Transfusion and Apheresis Science was published by one of our Centre for
A ntibiotic resistance and the lack of novel antibiotics pose a real threat
to health, and therefore new solutions to fight resistant bacteria are
required. The Hancock Lab at UBC is using host defense peptides to
Mice treated with IDR-1002 without any infection showed few
changes in gene expression, indicating the potential safety of this
compound. When mice were treated with IDR-1002 prophylactically,
Blood Research investigators, Dr. Edward Pryzdial.1 Together with his students and a clinical colleague, Dr. Pryzdial’s group
set out to provide a high-level perspective of the latest advances in clotting system biochemistry and its relation to various
bleeding disorders. He says the aim of the article was to “provide guidance for graduate students and postdoctoral fellows
tackle the problem of antibiotic resistance: These peptides, which occur before P. aeruginosa infection, the altered expression of genes induced by
who need a big-picture snapshot of hemostasis as a springboard for their own in-depth studies”. His aim was also “to provide
naturally, are also known as Innate Defense Regulator (IDR) peptides. the bacterial infection was greatly reduced (2111 genes vs 4739 in lungs).
physicians with a streamlined resource for assistance in the clinic”. It is not only a useful resource for trainees and clinicians,
IDRs do not kill bacteria directly like traditional antibiotics, but rather, Also, the inflammatory-response genes were downregulated, there were
but for anyone who is new to the field of coagulation or wants to dust-off their clotting concepts.
modulate our innate immune system to downplay excessive inflammation reduced proinflammatory chemokines and cytokines and fewer bacteria
and enhance protective immune functions. Pseudomonas aeruginosa is in the lungs. The types of white blood cells present were altered, i.e.,
In this article, Dr. Pryzdial discusses the tightrope walking strategy that blood uses to maintain the balance of hemosta-
an opportunistic pathogen that causes pneumonia. P. aeruginosa lung there were fewer neutrophils and more monocytes/macrophages, cells
sis. He points out how the default program of the vasculature is anti-clotting and any breach to the execution of this program
infections are particularly problematic in cystic fibrosis patients whose that help to resolve inflammation by clearing dead neutrophils after an
switches it to clotting mode. Once a clot has done its job of sealing leaky vessels, it induces anti-clotting and clot dissolution
lungs are already compromised, and the infections are not easily treated immune response.
to restore the normal flow of blood. Further, the review also illustrates the involvement of endothelial cells, platelets and
due to increasing drug resistance of this Gram negative bacterium. Thus, treatment with IDR-1002 prior to infection with P. aeruginosa
red blood cells in clot formation and lysis. Understanding the molecular
In a recent study published in Infection and Immunity, Kelli dampened the overwhelming inflammatory response whilst reducing
principles of blood clotting is imperative in clinical settings. This encom-
Wuerth, a former graduate student in the Hancock lab, used a 12 amino the bacterial burden in the lungs. This is important since it is often the
passing overview of this convoluted clotting system is a great tool for cli-
acid synthetic host defense peptide, IDR-1002, in a murine model of exaggerated host response to infection that causes the damage or disease,
nicians to provide improved patient care and diagnosis.
acute P. aeruginosa lung infection.1 Changes in gene expression in rather than the infection itself. The results of this study suggest that IDR-
lungs and blood following infection with P. aeruginosa were analysed 1002 primes the immune response to respond to infection. Future research
Prior to publication of this review article, I took a graduate course
by RNA sequencing followed by comprehensive bioinformatics studies in the Hancock Lab will address whether IDR-1002 could be used as an
taught by Dr. Pryzdial on the biochemistry of hemostasis. I can comment
to determine which pathways are affected. Bacterial infection altered adjuvant or in combination with antibiotics to improve the host response
first-hand that that the article is an excellent resource that I wish I had
the expression of over 4700 genes in lungs and over 1300 in blood and promote the elimination of P. aeruginosa lung infection.
while immersed in the course!
(about half upregulated and half downregulated in both tissues) with
59 pathways being differentially regulated. These included hemostasis, Infect. Immun. (2018) 97(1): e00661-18. C
1
Transfus. Apher. Sci. (2018) 57(4): 449-457. C
1
axon guidance (cell migration), and chemokine signalling. As expected,
the upregulated proteins that included, for example, chemokines and
matrix metalloproteinases, were involved in inflammation and immune
responses. In keeping with the RNA-seq data, neutrophils, white blood
cells that destroy bacteria, were increased in the infected lungs.
8 9
Profiles Events
Keystone Symposia:
The meeting included a session on single cell computational biology
CBR trainee Kate Sedivy-Haley (third from left) shares her workshop group’s position on pollution in
where Dr. Rahul Satija, who developed Seurat (a single cell computational
a “Science Policy 101” exercise. Also participating, UBC PhD Candidate Alyssa Kirlin (far left).
R package), introduced Seurat version 3 and Dr. Dana Pe’er talked
Single Cell Biology, about new computational tools to advance single cell biology. Many
computational packages/techniques for single cell RNA sequencing Scientists Wanted: Influencing Science Policy at the
Breckenridge, quality control or analysis were introduced. Another interesting session
was on using single cell data to reconstruct cell lineages, where Drs.
Canadian Science Policy Conference
Colorado Fernando Camargo and Thomas Hofer discussed cellular barcoding using
different approaches. Single cell imaging was also an important topic at
the meeting. Dr. Lukas Pelkmans talked about the “4i imaging system”
By DR. ERIKA SIREN, Kizhakkedathu Lab and
which is able to image across scales from tissue to molecular resolution
K A T H A R I N E S E D I V Y - H A L E Y, P h D C a n d i d a t e , H a n c o c k L a b
and Dr. Masahiro Ueda presented “AiSIS”, an automated live single cell
imaging technology for analysis of signal transduction at single molecule
resolution. Additionally, novel in situ protein imaging techniques that
offer higher resolution with multiplexing capabilities such as a technique
A cademics are often billed as top-notch problem solvers; however, the
task of translating their work into policy is a challenge that can leave
even the best researchers stumped. What can scientists do to influence
policy, and involving scientists in decision-making is integral for ensuring
that funding decisions are informed and relevant. Recognizing this
knowledge gap, funding agencies have put forward several initiatives to
By DR. HESHAM SOLIMAN,
Research Associate, Rossi Lab termed Immuno-SABER were presented. Finally, many new multiplexed policy that supports strong Canadian science and innovation? How does get more young scientists interested in policy. CIHR is in its third year
sequencing techniques such as MULTI-seq, RAGE-seq and SPLiT-seq, an academic get scientific evidence into the hands of decision makers? of funding the Health Systems Impact Fellowship: a two year program
were introduced in the meeting, each offering distinct advantages and These questions and more were discussed at the 10th Canadian Science in which a PhD or PDF leads a collaboration between academia and
tailored for specific uses. Policy Conference (CSPC), held November 7th-9th, 2018 in Ottawa. government that addresses critical challenges in Canadian healthcare.
Each year, the event brings together experts from academia, policy, and Likewise, Mitacs launched their Canadian Science Policy Fellowship in
Finally, I would like to thank the Centre for Blood Research for the industry to share ideas along five themes: Science and Policy; Science 2016 that sponsors a one-year opportunity for PhDs or PDFs to work on
CBR travel award which gave me the chance to attend this meeting with and Society; Science, Innovation, and Economic Development; Science science policy issues within a government institution. For early career
some of the world’s most advanced scientists in the field of single cell and International Affairs; and Science and the Next Generation. The investigators, the CSPC is currently piloting Science meets Parliament,
biology. C 2018 conference’s 780 attendees and 267 speakers included four Centre an intensive one-day symposium immediately preceding the annual
for Blood Research members: three trainees and Dr. Dana Devine, UBC Canadian Science Policy conference. In this initiative, academics meet
professor and Chief Scientist at Canadian Blood Services. with key members of parliament including the Minister of Science and the
Dr. Devine presented in the conference’s Short Talks series, where Chief Science Advisor of Canada to establish an open and ongoing channel
she told the story of how contaminated blood led to building bridges between the two communities. For academics looking to influence policy
between research and health policy. After thousands of Canadians outside these initiatives, Nature recently published a useful perspective
were infected with HIV and hepatitis C through tainted transfusions, a piece that highlights the do’s and don’ts of impacting science policy.1
formal federal inquiry was launched and Canadian Blood Services was The CSPC provides a unique opportunity for trainees to learn about
established to address the gaps in our national blood policy. Canadian science from a societal perspective. Regardless of whether you see
Blood Services developed a hub-and-spoke research network with a yourself in a science policy career or not, experiences such as these are
focus on collaboration and partnership, to develop expertise in blood an effective way to re-invigorate and re-evaluate your research.
transfusion, facilitate foundational transfusion research, and develop a Missed the 2018 conference? Check out the interviews published on
Blood for Research lab and donor centre in Vancouver. At this centre, some the Canadian Science Policy Centre’s YouTube channel. The conference
donors who are excluded from medical blood donation can still contribute proceedings are also freely available on the CSPC 2018 website2; trainees
to blood research. Canadian Blood Services is also involved in knowledge interested in science policy careers may be especially interested particu-
mobilization and education, including developing best practices for larly in the sessions “Science Policy 101” and “Skills and competencies
transfusion and sharing successful practices in other countries. where science and policy meet”.
As an expert actively involved in both academia and government,
Dr. Devine noted that far too few scientists engage in policy discussions 1
https://www.nature.com/articles/s41599-019-0232-y#Sec3
outside of “coffee room” chat. Research funding is heavily impacted by 2
https://sciencepolicy.ca/cspc-2018 C
12 13
Awards Events
22nd International Conference on Miniaturized Achieving Health & Wellness One Step at a Time
Systems for Chemistry and Life Sciences
By S. SOROUSH NASSERI, PhD Student, Cheung Lab By CRISTYN FUNG, CBR Education Program Assistant
14 15
Events Events
and graduate trainees with academic backgrounds in life sciences. scene and learn about how DNA fingerprinting can be used to uniquely
Volunteers engaged girls in meaningful discussions about genetics and identify individuals. The girls were curious, enthusiastic, and determined
genomics through making DNA code bracelets. In this activity, the girls analyzers as they examined evidence to find out who to convict for the
were tasked with spelling their names using DNA. They did this with the fictitious murder mystery!
help of a table that matched amino acids, represented by letters of the
alphabet, with their respective DNA codon. In addition to the DNA code Overall, this event was a fantastic interplay of today’s leaders,
bracelet activity, the girls also had the option to make a DNA double helix empowering the leaders of tomorrow. This event was an opportunity for
origami, which served as a good starting point for conversations about pioneers in STEAM to communicate science in an effective and engaging
the DNA structure. way to the next generation. It also propelled our goal to facilitate the
integration of STEAM into society through enhancing STEAM literacy
In the afternoon session, Genome BC and the CBR hosted a “Crime among our youth.
Scene Investigation” collaborative workshop based on real life laboratory
techniques employed in forensic science. Two workshops were held Special thanks to Science World at Telus World of Science, all of the
consecutively throughout the afternoon session and attended by forty volunteers, and the organizing committee for such a successful event!
girls. During the workshops, the girls had the exciting opportunity to gain To learn more about future Girls and STEAM events visit: https://www.
hands-on experience in matching blood types from suspects to the crime scienceworld.ca/girls-steam. C
O n Saturday November 3rd, 2018, aspiring young scientists, engineers, and thought
leaders came from all across BC for the Girls and STEAM Symposium and Showcase.
The event took place at TELUS World of Science and represented over 20 Science,
Technology, Engineering, Arts and design, and Mathematics (STEAM) representative
institutions, companies, and organizations. The event launched BC’s Girls and STEAM
week, announced by MLA Bowinn Ma, to advocate for science literacy and empower
elementary school girls to develop confidence, pursue their curiosity, and spark their
excitement in STEAM fields. The Centre for Blood Research (CBR) and Genome British
Columbia (Genome BC) collaborated to showcase the exciting applications of genetics,
genomics and blood research techniques.
Keynote speaker Ann Makosinski (above) and
The morning began with inspiring speeches from accomplished women in STEAM Bowinn Ma (below)
fields. We met Ann Makosinski, a 21 year old inventor and TEDx presenter who explained
how science and art intertwine to make the best discoveries like a hand-powered flashlight.
We also heard from Bowinn Ma regarding how she overcame the challenges involved with
being a minority female civil engineer which led her to become an exceptional leader in BC’s
transportation system and politics.
16 17
Events Events
Patient perspective presenter Dr. Georgina Butler This year’s patient perspective talk was given by Dr. Georgina Butler (Research Associate from Dr.
Norman Bethune Symposium 2019: In Review Chris Overall’s group at UBC), who recounted the harrowing story of her son, Sam, and his struggle
with arteriovenous malformation (AVM), which can lead to sudden large bleeds. Dr. Butler described the
emotional roller coaster ride she has experienced while supporting Sam through numerous unexpected
bleeds and procedures to attempt to treat his condition. Her story was filled with fear, frustration, and
B y V I C T O R L E I , Te c h n i c i a n a n d L a b M a n a g e r , C o n w a y L a b , helplessness, but sprinkled in between were moments of triumph and optimism. Dr. Butler reminded us
a n d S R E E PA R N A VA P PA L A , P h D S t u d e n t , K i z h a k k e d a t h u L a b that the patients we discuss in case studies could easily be people in our lives, and that the impact of their
conditions is much greater than data points on a graph.
Audience members at Norman Bethune After a lunch break, the afternoon session
Symposium
began with two clinician perspective presentations.
Dr. Jeannie Callum (University of Toronto) focused
on the management of hemostasis and approaches
to streamline the care of bleeding patients, such as
expediting trauma room protocols using electronic
patient identification methods and using alternative
blood products. Dr. Mitchell Cohen (University of
Colorado) then talked about the trauma surgeon’s
approach for treating acute traumatic coagulopathy.
He drew the audience’s attention to the importance
Dr. Peter Rahfeld (University of British Columbia)
of a data-driven, precision medicine approach in
these patients, as each trauma patient is different
and coagulopathy changes with time after the event
of trauma.
The rest of the afternoon was focused on red blood cell research. First, Dr. Peter Rahfeld (Postdoctoral
Fellow from Dr. Stephen Withers’ group at UBC) shared the discovery of highly efficient enzymes that can
convert Type A blood to Type O blood. This research on universal blood production was highlighted by
CIHR as one of the major achievements in 2018. Next, Dr. Aaron Tobian (Johns Hopkins) highlighted the
T he Centre for Blood Research’s annual Norman Bethune Symposium was held on April clinical risks associated with red blood cell transfusions, specifically the risk of thrombosis. While larger
3rd, 2019 at UBC Robson Square in downtown Vancouver, BC. A tribute to the Canadian clinical trials are required, he noted that in a post-operative scenario, the odds of a patient developing
physician Dr. Norman Bethune, a pioneer in trauma surgery and transfusion medicine, this venous thromboembolism is two times higher when they receive red blood cell transfusions. The final
symposium is a forum for researchers, clinicians and trainees to present their work in these talk of the day was by Dr. Robin Turner (University of British Columbia), who described using Raman
related fields. This year’s program was spearheaded by Dr. Dana Devine and Dr. Ed Conway. spectroscopy as a quality control method to assess stored red blood cells within sealed blood bags.
After the opening remarks by Dr. Conway, the symposium talks began with Dr. Richard Throughout the day, the trainees had opportunities to share their current work as oral or poster
Kaufman (Brigham and Women’s Hospital), who discussed the relationship between frequent presentations. To learn more about these, check out the R.E.D. blog post from Canadian Blood Services
platelet donation and long-term depletion of platelets and lymphocytes. Next, Dr. Angelo (pages 20-21).
d’Alessandro (University of Colorado) shared his interest in using metabolomics to determine
metabolic markers of oxidative hemolysis of red blood cells, and how this information could Kim Lab at Norman Bethune Symposium
be used to “personalize” transfusion medicine. He is exploring whether metabolomics could The symposium came to an end with CBR Education Program
help better match the donor and specific storage conditions with recipients. Manager Dr. Stefanie Mak awarding prizes to the top poster
presenters, and Dr. Conway thanking all the speakers for making
Following a sumptuous coffee break, Dr. Chris Overall (University of British Columbia) the day an engaging educational experience. Thank you to Dr.
spoke about his studies of MALT1, a caspase-like protease that plays a role in immune Devine for putting the program together, as well as Dr. Ed Przydial,
responses, and the identification of an allosteric MALT1 inhibitor that can rescue a patient Dr. Stefanie Mak, Hana Kim and Cristyn Fung for all the behind-
who has a homozygous MALT1 mutation. Discussing his research on hemorrhage treatment the-scenes support. Special thanks go to the event sponsors: CSL
in the battlefield, Dr. Anirban Sen Gupta (Case Western Reserve University) described the Behring, Bayers, Grifols, Canadian Blood Services, Naiman Vickars
development of Synthoplate, a synthetic platelet surrogate that is temperature-stable and Endowment Fund and Octapharma. C
enhances aggregation of active platelets.
Norman Bethune Symposium co-organizer Dr. Dana Devine
18 19
Events Events
T his annual symposium honours Canadian physician, Dr. Norman Kelsey Johnson, a social scientist and PhD candidate from the used to treat challenging or difficult-to-reach bleeds such as stomach
“I am happy to be here! It is great that there’s an opportunity
Bethune. A controversial figure, Dr. Bethune is remembered as a Department of Geography at the University of British Columbia bleeds. Using a model of upper gastrointestinal bleeds in pigs, Massimo
for Canadian Blood Services trainees to travel to Vancouver
fearless doctor, an innovative biomedical engineer, an early proponent presented research she is conducting in partnership with Canadian Blood found that treatment with self-propelling particles halted bleeding six-
and present their work. Presenting here has been a great
of socialized medicine, and a trailblazer who operated the earliest Services and the CBR on the ethical debates surrounding the history of times faster than a similar treatment that is FDA approved.
conference experience; there are lots of opportunities for
practical mobile blood banks. Reflecting his legacy, the Norman Bethune commercialization of donor plasma. Kelsey is a recipient of the prestigious
dialogue with many high-profile investigators in my field.” –
Symposium offers a platform for researchers and clinicians to present UBC Public Scholars Award, which supported a four-month research Understanding red blood cells
Amhed Al Arnawoot, McMaster University
strategies and challenges experienced within transfusion medicine. term in Atlanta, Georgia, during which she studied the history of paid
The program for this year’s symposium was developed by Dr. Dana plasma by trawling through media archives. Her findings highlight the Another recipient of a graduate fellowship from Canadian Blood
Devine, Canadian Blood Services’ chief scientist, and Dr. Edward Conway, shifting public perception and stigmatization of paid plasma donors in the Services, Emel Islamzada (Dr. Hongshen Ma Laboratory, University of I've described here the work of the trainees who gave invited talks,
Centre for Blood Research (CBR) director. The agenda struck a balance southern US over the past several decades, research that is particularly British Columbia) described a new method to monitor stored red blood but trainees contributed much more to the 2019 Norman Bethune
between providing well-established experts the opportunity to present relevant as the debate over paid plasma continues to play out in Canada. cell quality. She is using a microfluidic device developed by the Ma symposium. Many trainees presented posters, and each one gave a
their work and showcasing trainees and early-career investigators. As Dr. Laboratory that sorts red blood cells based on how rigid or flexible they 30-second summary of their research at a “shot-gun talk” session. The
Devine noted, the symposium has much to offer trainees: it provides “a Innovative research to better manage bleeding are – a known marker of the cells’ quality. She hopes to use this method to brief snapshots presented covered research ranging from age-related
chance to reunite with friends and colleagues, and encourages networking find “super-storers” – blood donors whose red blood cell quality remains macular degeneration to factors that affect red blood cell lysis during
Kelsey Johnson (University of British particularly high during the storage period. storage.
opportunities for trainees, including the opportunity to meet high-profile Over coffee during the trainee
Columbia)
investigators, which can be particularly valuable for trainees and those poster session, I chatted to graduate Dr. Narges Hadjesfandiari, a postdoctoral fellow (Devine laboratory,
early in their careers”. student, Wayne Zhao (Devine University of British Columbia) used product quality control data from To culminate a day filled with valuable networking and knowledge
Trainees presented an impressive six talks and 20 posters on Laboratory, University of British Canadian Blood Services to understand factors that influence the quality dissemination, poster award winners were announced: 3rd place went
topics ranging from the ethical debate around paid plasma donations to Columbia), who has attended three of red blood cells. She showed that the time to production (i.e. the length to Wayne Zhao (Devine Laboratory, University of British Columbia), 2nd
innovative materials to stop bleeding in trauma patients. In this post, I'll CBR symposia since he began his of time between collection of a whole blood donation and the production to Aparna Gopal (Dr. Aly Karsan Laboratory, British Columbia Cancer
focus on the excellent contributions of trainees. Visit the Centre for Blood graduate studies. He commented of a red blood cell component from that donation) is important. Red blood Research Centre), and 1st place to Emel Islamzada (Ma Laboratory,
Research blog to read about the day's invited talks (pages 18-19). on why he keeps coming back: cell units that had a shorter time to production had lower hemolysis, University of British Columbia). Congratulations to award winners! C
indicating better quality. She is also investigating factors in donors that
may impact quality.
20 21
Events Events
H ave you ever wanted to learn about the cryopreservation of red blood
cells using novel polymers or the future of skin cancer detection?
How about social media tips or how many chop sticks get thrown out in
recipient was Dr. Georgina Butler from the Overall Lab. Dr. Butler spoke
fondly of not only being a part of her mentees’ successes, but also their
failures. The CBR community is grateful for individuals like Dr. Butler who
Vancouver every year? Then CBR Research Day was the place for you! go above and beyond to share their knowledge and passion for science
with others. Congratulations to all the nominees.
On Tuesday August 13th 2019, the Centre for Blood Research (CBR)
and the School of Biomedical Engineering (SBME) communities gathered This year’s keynote address was given by Dave Ireland, a speaker
to celebrate the work of over forty students who participated in this year’s with years of experience studying, conducting research, teaching, and
CBR-SBME Summer Studentship Program. This special program provides working in conservation biology and ecology. His talk tied together
CBR Research Day 2019 attendees
students with an opportunity to get hands-on lab experience during the elements of storytelling, the scientific process and how it can be applied
summer months. They also get to participate in tours of campus facilities, to real-world situations. Mr. Ireland shared stories that emphasized the
social events, and workshops. interconnectedness of the natural world. Who would’ve thought that
whale poo might even help save the planet by contributing significantly
The day started off with lunch, which was followed by oral to carbon sequestration by phytoplankton?
presentations from the summer students. They all did a terrific job
of expressing their passion for their projects in brief yet informative The keynote address was followed by the poster session, where
2.5-minute talks. Their work covered a wide range of topics, from the the summer students were enthusiastic to cover what didn’t fit into
development of tools for cellular engineering, to the investigation of their oral presentations. The session was judged by graduate students,
diseases and the elucidation of new diagnostic markers. post-doctoral fellows, and research staff. The best undergraduate poster
award went to Jessica Ha from the Conway Lab, who presented her work
Meredith Clark from the Kizhakkedathu Lab, who spoke about her investigating the role of CD248 in the differentiation of 3D matrix-free
CBR Research Day keynote speakcer Dave Ireland work investigating endothelial cell growth under shear stress, was this pre-adipocytes. The best graduate poster award went to Tanya Bennet
year’s winner of best oral presentation as judged by her fellow students. from the Cheung Lab, who presented her work towards the development
The people’s choice award went to Sia Cecilia Jan-Abu, who thoroughly of a vascularized airway-on-a-chip.
CBR Research Day 2019: In Review enjoyed her summer working in the McNagny Lab investigating the
modulation of innate immune responses as a therapy for muscular And of course, it wouldn’t be a CBR Research Day without the
dystrophy. delicious refreshments and BBQ dinner that were enjoyed at the end of
By SARAH BOWERS, Undergraduate Student, Brown Lab the evening. Many thanks go to the sponsors of the CBR-SBME Summer
“I can’t believe how fast the time has gone,” Studentship Program for making this event possible, and the volunteers
she said, “It has been a really, really positive and staff who made this day a success, especially Hana Kim, Dr. Stefanie
experience.” Mak, and Cristyn Fung.
The talks were followed by the presentation of the 2019 Neil If you missed this year’s Research Day, you can find an archived video
Mackenzie Mentorship Excellence Award. This award is given annually of the talks on the CBR website. Or better yet, find a summer student to
to honour the memory of Dr. Neil Mackenzie, a passionate and dedicated tell you about their bleeding-edge research. C
mentor who touched the lives of many through his generosity and
enthusiasm for helping others to reach their goals. This year’s award
Poster presentations at CBR Research Day 2019 Research Day summer student presentation winners with Dr. Ed Conway.
Left to right: Jessica Ha; Meredith Clark; Sia Cecilia Jan-Abu.
22 23
CBR-SBME Summer Students with Dave Ireland
Awards Events
2019 Neil Mackenzie Mentorship Excellence Award 37th World Congress of the International Society of
Hematology
Thank you to all of our nominees, as well as the nominators who took the time to submit nominations! By HAISLE MOON, PhD Student, Kizhakkedathu Lab
24 25
Opinion Opinion
Marketing Your
Postdoctoral researcher and free lance science writer Dr. Anthea Lacchia, unit’s communications office that your accomplishment is groundbreaking, and
who previously worked in the Nature Press Office, and former University doing so a few weeks ahead of the publication date. Even before contacting them,
of British Columbia (UBC) Medicine Communications Officer Brian it is a good idea to try explaining your findings to members of the non-scientific
Published-To-Be Paper Kladko have an array of tips on how to market your publication to its
fullest potential.
community. Brian looks for concrete reasons for your research to engage wider
audiences; he pays special interest to clinical trials and results that diverge from the
Anthea and Brian stress the importance of marketing research original hypothesis, and appreciates visual aids that complement your explanation.
B y F E N N I E E A S T O N VA N D E R G R A A F,
because it is our scientific duty to ensure that our findings are made Brian also values when the researcher brings a sense of humour and candidness to
Jefferies Lab
accessible for a general audience, such that we can advance modern the interview, although nothing personal will pass through his writing without your
healthcare for the better. They also explain how the researcher will permission.
benefit: Anthea comments that if you feel you can’t reach wider audiences, your project Check out your
may be better suited to science specific outlets such as Chemistry World, Physics departmental
magazine for fresh
World, etc. Anthea and Brian both advocate for the use of Twitter to promote your
research!
findings, but be cautious if your work poses controversial or ethical concerns.
“Scientists do not operate in a “One word of advice: do check your e-mails in the weeks leading to publication, as
vacuum…a lot of research is funded media deadlines are very tight. Other options to promote your research in general
by taxpayers' money, so the general public include writing a blog post for a lay audience about your findings, recording a How to market your research to your
ought to, at the very least, be able access the podcast about your work, or organizing a public engagement event around your departmental communicator
findings of that research, and I would argue, research, such as a school visit or workshop at a festival.” —Anthea
also have a say about what research is needed.
Marketing your research will also make you a better Anthea also reminds us that “If your paper is in press, some journals ask that
scientist, because it will force you to communicate you respect an embargo until it is published. This means that there is a date before
your ideas in new ways, to pitch them at different which your research cannot be published in the media (usually the publication Send a 1-2 paragraph lay
levels and to look at your research from fresh date). Just be aware of this in case you get requests for interviews before your summary of research and a
perspectives.” —Anthea research is published.” recent version of paper to your
Overall there have been several success stories from UBC researchers who departmental communicator
have marketed their findings. (media.relations@ubc.ca).
“I wrote a news release about an existing drug that had dramatically positive results
“First off, your funders might
with a rare eye disease. Someone saw it on our website. She had a sister whose son
require it; CIHR grants come with
had this condition and as a result of that, the mother got in touch with the scientists; The communicator
a knowledge translation component.
her son was one of those people enrolled in their clinical trial.”—Brian responds, and if
Secondly, exposure in the media enhances
interested, they will
both your reputation and the reputation of
In February 2019, Michael Smith Labs (UBC) published a report about schedule an interview. Interview includes
your institution. And most important of all, that
Dr. Leonard Foster (Centre for Blood Research) and his Genome Canada award, Bring visual aids! mostly questions that
exposure could benefit patients – just because
which was boosted by STEMCELL Technologies’ Science in the City newsletter. Dr. weren't mentioned in
you’ve done work that you think will benefit
Foster, the Head of UBC’s Biochemistry Department and Core Proteomics Facility, the paper (challenges,
patients, doesn’t mean it will unless the right
was awarded the funding in collaboration with Dr. David Wishart (University of mistakes made, personal
people find out about it. Publications in
Alberta) for their project entitled “Illuminating the dark matter of the metabolome connections, etc.).
journals are not enough.” —Brian
with convolutional neural networks”. Leonard is very active on Twitter regarding
his honeybee high-throughput genetics research which has been covered by the Communicator
Vancouver Sun: He is constantly debunking myths about honeybees to the general reaches out to news media
public through his research. inside and outside Canada
If you have a discovery – or are working towards a potential discovery – that (e.g. The Vancouver Sun, The
With the help of your departmental communicator, your study could be turned into deserves more exposure, contact UBC Media Relations at media.relations@ubc.ca. Globe and Mail, CBC, National
a video or press release on the UBC News and beyond Contact Anthea at anthea.lacchia@icrag-centre.org and follow her on Twitter Public Radio, STATNews, The
@AntheaLacchia to read her latest articles. C Guardian).
26 27
Research Research
Creating Platelets 2.0: Stronger, Faster, and with hemopoietic stem cells. These stem cells can be grown inside of a
laboratory, modified, and then transplanted back into an individual.
Delivery of RNA to the platelets is only the first step in creating
genetically modified platelets. To modify a platelet, the RNA has to
This approach has been used to treat inherited diseases. However, be read by the cell, creating a new protein that alters the platelet’s
Twice the Life-saving Power this method permanently changes a person’s platelets, and would
not be useful in scenarios where only temporary modifications to
function. Unfortunately, the RNA that we delivered could not be read
by the platelets. To address this, we are now varying the composition
the platelets are required, such as during active bleeding. Platelet of the nanoparticles, using different types of lipids to build the
B y D R . S T E FA N I E N O VA K O W S K S I , K a s t r u p L a b BioGenesis, a company based in the United States, has recently particles. This may alter where the RNA is delivered within the platelet
developed a technology for growing large numbers of platelets from and allow the RNA to be read by the platelets. Further experiments
modified hemopoietic stem cells, but it will be years these laboratory- are also needed to see whether RNA-treated platelets can function
Platelet apheresis. Photo credit: Canadian Blood Services grown platelets can be used in hospitals. once they are placed back into a patient. Currently, the platelets are
modified after they have been isolated from whole blood from healthy
To address this problem, the Kastrup Laboratory at the University individuals, and their function has only been assessed in a test tube.
of British Columbia is taking a novel approach to directly modifying Whether these platelets still circulate and respond to signals within
platelets. Using small, synthetic spheres called lipid nanoparticles, we circulating blood remains to be seen.
successfully delivered genetic material into platelets without inducing
unwanted changes to the platelets. By using specific lipids, or fats, Platelets are involved in bleeding, cancer, and even immune
to build the nanoparticles, we identified nanoparticles that deliver and inflammatory disorders. The ability to directly modify platelets
messenger RNA to the platelets. Like DNA, messenger RNA is a would extend our knowledge of platelet biology, and hopefully lead
type of genetic material that is read by a cell to create new proteins. to improved therapeutics for a range of diseases. Platelet transfusions
Unlike most cells, platelets do not have their own DNA, so genetically are already essential to treating bleeding. If researchers are successful
modifying platelets requires delivery of messenger RNA. in creating modified platelets that can be used in hospitals, there may
be even more opportunities for platelets to act as a life-saving therapy
in Canada and the throughout entire world.
The 2018 Canadian Blood Services Lay Science Writing Competition was severe bleeding platelets become dysfunctional, and these platelet
organized by the Canadian Blood Services’ Centre for Innovation with transfusions no longer work. Correcting platelet dysfunction during Microscope images of platelets (red) that have taken up foreign genetic
welcome support from Science Borealis and the Centre for Blood Research trauma could be addressed by modifying platelets. For example, material (green). Adapted from: Novakowski et al: Delivery of mRNA to Dr. Stefanie Novakowski
at the University of British Columbia. Dr. Stefanie Novakowski was the joint platelets could be engineered to produce proteins that activate platelets using lipid nanoparticles. Scientific Reports 2019: 9; 552.
3rd place winner of the inaugural competition. Below is her prize-winning clotting or stabilize blood clots after they form. Platelets are also
entry. Originally posted on the Canadian Blood Services R.E.D. blog. given to patients with low platelet counts, which can be caused by By testing various classes of these nanoparticles, we determined
a variety of factors, including certain cancers. While the platelets are characteristics of the nanoparticles that are important for uptake.
28 29
Opinion Events
A Plug for the Leaky Pipeline CBR Postdoc and Research Associate Retreat at
Loon Lake
B y B R O N W Y N LY O N S , P h D S t u d e n t , S t r y n a d k a L a b By DR. GEORGINA BUTLER, Research Associate, Overall Lab
and one in the eye for Alessandro Strumia, a recently suspended Young researchers need to see that there are strong female- Maple Ridge, BC, included a scavenger hunt that culminated in an After breaking the ice, we ventured out for a walk in the forest.
scientist at CERN who stated at a presentation on gender and higher identifying scientists out there, role models like Dr. Donna Strickland, escape room. None of the teams managed to open the final door The only disappointment of the day was that the hand-drawn ferry
energy physics that ‘physics was invented and built by men’2. Prof. to perceive themselves capable of pursuing their dreams and pushing (except the first team because the organisers had left the door open), was broken — even though we overloaded it last year (http://cbr.
Strickland was awarded the Nobel Prize for her Doctoral thesis work for cutting edge discoveries in STEM research. So, how do we know but that was through lack of time, not brains ….. really. ubc.ca/how-many-scientists-does-it-take-to-sink-a-ferry/), I don’t
on chirped pulse amplification, a methodology now used in corrective when we have reached equality between genders in the sciences think it was us! After lunch, we paired up for a scavenger hunt which
eye surgery and medical imaging1. and ‘plugged’ the so-called leaky pipeline? Perhaps we’ll know we’re was won by team “George Michael”, RAs George Butler (Overall
headed in the right direction when the headlines stop reading ‘Female Lab) and Michael Hughes (McNagny Lab). We ended the day with
Unfortunately, the statistics of successful women in science are Scientist Wins Nobel Prize’ in future award seasons. a survival task in the forest — constructing overnight shelters from
so bleak that a woman winning the Nobel prize in a science category tarps or a hollow tree (top tip: use what’s available) and using flints
is big news. The leaky pipeline of science refers to the drastic drop- 1
https://www.theglobeandmail.com/world/article-canadian-scientist- to make a fire to toast marshmallows (my friend Hugo’s first toasted
off of female scientists from academia between post-doctoral donna-strickland-shares-nobel-physics-prize/ marshmallow!).
fellowships and academic positions3,4, despite the roughly equivalent 2
https://www.bbc.com/news/world-europe-45709205
representation of women and men earning PhDs in a STEM-related 3
Proc Natl Acad Sci USA (2011) 108(8):3157-3162. It was a fun day getting to know our peers and working out how
field. Why are women underrepresented in academia despite steps 4
PLoS One (2017) 12: e0187285. we might collaborate by combining our expertise. Join us next time?
being taken towards inclusion and equality? 5
Proc Natl Acad Sci USA (2012) 109(41):16474-16479. C
6
Proc Natl Acad Sci USA (2014) 111(28): 10107–10112. C
No hand-drawn ferry this time Hugo enjoying his first toasted
A contributing factor may be that women put their careers on around! marshmallow
hold to raise children; however, in today’s modern society, this is not RAs and Postdocs from the Conway, Hancock, Ma, McNagny
necessarily the case. A shocking study published in PNAS by Moss- and Overall Labs plus our Education Program Manager Stefanie Mak,
Racusin et al. (2012) explored gender bias during the hiring process5: carpooled from Vancouver and met at Loon Lake for ice breakers
The applicants were all undergraduate level students, which authors and muffins. First we had to introduce a “new friend” to the group.
considered a critical time in a young scientist’s career. Interviewers My friend was Hugo Cesar Ramos De Jesus who recently joined the
(professors across biology, chemistry and physics) were assigned Overall Lab from Brazil where he worked on degradomics of the ant
an application package for a laboratory manager position that was Atta sexdens. Then we played “Blood Bingo”, where we had to fill in
labelled with a name randomly identifiable as either male or female, a chart, “bingo style” which had small descriptions of CBR research
with the only variable between the applications being the gender. topics in each box. We had to talk to others and find someone who
Interviewers were asked to rate the applicants on whether they was working on that topic. Houra Loghmani (Conway lab) won that
would be hired, receive mentorship, their competence, and provide a game. Finally, we played “word salad” where everyone wrote a random
starting salary, with the knowledge that the applicant would receive word or phrase on a piece of
this feedback. Female applicants were deemed less competent, less paper and our 2 teams took
hireable, provided a lower starting salary and offered less mentorship turns picking and guessing Houra showing off her team's survival shelter
(Figure 1). Both female and male professors, regardless of age, field what was on the paper from:
of study and tenure status, equally viewed female applicants as round (1) a description not
being less qualified than the equivalent male applicant. The authors including the word/phrase
concluded that being viewed in this manner could lead to a withdrawal Figure 1. From Moss-Racusin et al. (2012); depicting differences in itself; (2) a single word; (3)
competence, hireability and mentoring of female student applicants5. Error
of females from a future academic career5. A similar study revealed charades – not so easy with
bars are standard errors; nmale=63 and nfemale=64.
that women are directly excluded from influential laboratories: Male random thoughts like “jumpy
faculty who were funded by large granting agencies or had won a little flea”, “soccer is the best
30 31
Events Events
Career Night 2019 organizers Attendees networking with guest mentors If you’re looking for a more traditional position in industry, this from Canadian Food Inspection Agency (CFIA) provided an insightful
year’s career night also had some great representatives from biotech. look at the transition from academia to government research. Simon
Akshita Puri from Merieux Nutrisciences, Dr. Ismael Samudio from completed his postdoctoral research in genetic regulation of steroid
Virogen Biotech Ltd and Dr. Marta Szabat from AbCellera Biologics pathways, transitioned into a position at a Vancouver Biotech, QLT,
attended the evening to share their experiences in the biotech and then landed in a job at Health Canada as a lab specialist in the BC
industry. After a decade following her research interests, Akshita food safety laboratory. Simon’s perspective moving through academia,
moved into the biotech industry where she was able to find a career biotech and government has led him to conclude that, although the
managing operations of a microbiology lab at Merieux. Ismael has research can be similar, the atmosphere in these career positions
a wide range of experiences from genetics to pharmacology and is quite different. He says that biotech and government research
toxicology to immunotherapy and drug development. He currently positions often worry a lot less about funding and publications
works as the Senior Director of R&D for Virogen. Marta is an alumna compared to academia, but there is an inevitable tradeoff for freedom
of UBC, who used to study pancreatic beta cell biology in diabetes. of project design and execution. Ultimately, Simon believes working
She started working for AbCellera as a senior scientist in 2015 and for CFIA is the best fit for his research interests, and provides a unique
now leads several development and partner projects. opportunity to explore other science routes.
Where Will Your Future Take You? Career Night Policy and government positions are also options for trainees
in science. Niniane Tozzi works for the UK Science and Innovation
Whether you are interested in science communication and
education, industry, or policy and government, career night proved
2019 Gives Students and Postdocs Insights into Network, in a job that might appeal to those either with or without
a background in this field. Although her graduate degree was a
that there are many options out there for science professionals.
Some common themes to be taken from the mentors’ advice
32 33
Events Events
34 35
We thank all our donors from academia, industry, and
the private sector for your generous contributions. cbr.ubc.ca