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1. Fatty foods >> increase in CCK, contraction of gallbladder, hence increased pain in
Cholecystitis
a. Initiated by mechanical obstruction of the cystic duct
b. Stones disrupt the protective mucous layer; epithelium exposed to bile salts
i. Mucosal damage, lecithin hydrolysis
c. Release of lysolecithin and prostaglandins --> inflammation and edema
d. Distention of the gall bladder leads to compromise of blood supply
i. Secondary bacterial infection
ii. Gangrene and perforation
e. Pericholecystic abscess or generalised peretonitis
f. Dx:
i. USG - Suggestive, not diagnostic
1) Pericholecystic fluid
2) Wall thickening
3) Murphy's sign
ii. Nuclear medicine hepatobiliary scan (radionucleotide)
1) Tracer is injected IV and taken up by the liver
2) Excreted into biliary tract
3) Take images as it moves through the hepatobiliary system
4) In cholecystitis (acute/chronic)
a) Radiotracer will be excreted into the common bile duct and the
small intestine
b) Gall bladder wont be visualised
2. Somatostatin:
a. Inhibits GH and TSH
b. Also inhibits basically every other hormone in the GIT
3. Tumour markers:
a. Alpha fetoprotein - Hepatocellular carcinoma (HCC), Yolk sac tumours; not very
specific or sensitive but still useful
b. CEA - Colon cancer prognosis post surgery; not for screening.
c. CA-125: Marker for ovarian surface cancer
d. PSA: Screening for prostate cancer
e. HCG: Gestational trophoblastic disease, H. mole, embryonal carcinoma,
choriocarcinoma
f. CA 19-9: Carbohydrate antigen; Pancreatic carcinoma
g. DHEA: Elevated androgen synth; Adrenal neoplasia
4. Gastrojejunostomies:
a. Bypass the duodenum
b. Hence bypass the site for uptake of Fe; hence iron deficiency
c. Vit C (active), Pyridoxine = B6 (passive) in the distal bowel.
d. Vit B7 = Biotin, and B6 = Pantothenic acid; uptake by sodium dependent
multivitamin transporter
9. Brunners glands:
a. Submucosal glands
b. Compound tubular ramified
c. Secretes alkaline mucous
d. Present only in the duodenum
14. AST and ALT also require Pyridoxal phosphate (PLP) as an essential cofactor (B6)
15. ALA synthase - Cofactor required is Pyridoxal phosphate
a. Synthesis upregulated due to reduced heme
i. Ferrochetalase inactivation due to Pb toxiticiy
ii. Ala Dehydratase also reduced by Pb
b. Lipoic acid: oxoacid and glycine cleavage complexes; antioxidant and scavenges ROS
c. Retinoic acid: binds to retinoic acid receptors >> Gene transcription
d. Biotin: Carboxylation
e. Thiamine pyrophosphate: Dehydrogenases
19. Rhinoviruses are acid labile, hence don’t infect the GI tract unlike the other Picornaviruses
20. Question on lymphatic drainage
a. Lymphatic drainage of structures follows their embryological origin
21. Lipids:
a. Duodenum site for digestion of dietary lipids
b. Jejunum is the site for digestion of lipid absorption
c. Cholecystectomy increases rate of enterohepatic circulation
i. Such patients are less tolerant to heavy fatty meals
v.
27. Both ulcerative colitis and Crohns disease may lead to Toxic megacolon
28. If Crohns + enterovesical fistula + fever/pyuria is present; think struvite stone.
35. Hemochromatosis:
a. HFE gene on Chr - 6p
b. Mutation most commonly seen:
i. Missense mutation
ii. Cysteine to Tyr mutation at 282
c. Clinical features:
i. Fatigue, dry mouth
ii. Impotence (because of testicular damage)
iii. Skin hyperpigmentation (bronze discolouration)
1) Hemosiderin deposition within the dermis
iv. Liver disease
v. Insulin resistance (bronze diabetes; destruction of islet cells by hemosiderin
deposition)
vi. Cardiac dysfunction + hypertrophy
vii. Arthropathy
38. Portal vein is anterior to IVC and immediately medial to Right lobe of liver (CT)
39. IVC - lies just anterior to the right renal artery, to the right of the aorta, enters into RA just
above the diaphragm above T8. IVC - common iliac veins join at L4 to form the IVC
d. Hypertriglyceridemia
i. Interruption of enterohepatic cycling --> Upregulates bile acid production
ii. Increase in b100 LDL receptors allows for more of the blood LDL pool to be
utilised for synthesising bile acids.
iii. Does nothing to VLDL synthesis; contraindicated in hypertriglyceridemia since
it can worsen it [why?]
iv. Reduces uptake of statins; hence must space out at 4 hour intervals
51. Fibrates:
a. First line drugs for hypertriglyceridemia
74. Leptin:
a. Produced by adipocytes (adipokine)
b. Causes Satiety
i. Decreases production of neuropeptide Y in arcuate nucleus of hypothalamus
ii. Leptin stimulates POMC in the arcuate nucleus
iii. Alpha-MSH produced by cleavage of POMC
c. Knockout mice:
i. Increased production since receptor interaction is blocked
ii. Would be zero production if leptin gene was mutated
d. Humans:
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d. Humans:
i. Sustained elevation of leptin due to increased fat stores = desensitization
79. Metabolism:
a. 1g protein - 4 cal
b. 1g carbohydrate - 4 cal
c. 1g fat - 9 cal
d. 1g Ethanol - 7 cal
91. CT - calcifications in chronic pancreatitis; pancreatitis may also lead to left sided pleural
effusion
a. Increased stool fat
102. HDV:
a. ssRNA; circular
b. Needs HBsAg to coat it to be effective
i. Hence only coinfection or superinfection of chronic HBV carrier
114. CEA isn't useful for diagnosis (not specific), but useful for monitoring tumour recurrence
after surgery
a. Grading: Histological features
i. Differentiation
ii. Degree of aneuploidy
iii. Number of mitotic figures
b. Staging: Extent of spread (important for determining prognosis)
i. Staging > than clinical symptoms (many are asymptomatic)
c. Type of resection + Extent of spread: Depends on tumour stage
118. Paneth cells = Secrete lysozyme; present at the base of crypts of lieberkhun
119. Colon with endometriosis:
a. Benign disease
b. May be symptomatic, responds to estrogen and grow
120. Abetalipoproteinemia:
a. AR
b. RBC findings: Acanthocytes
c. Inability to secrete TG rich lipoproteins (anything containing Apo B)
i. B100 - VLDL
ii. B48 - Chylomicrons
d. MTP (microsomal triglyceride transfer protein) mutation; no assembly of
chylomicrons
i. MTP is responsible for proper folding of Apo B
ii. Involved in transfer of lipids to CM and VLDL
e. Epithelial cells:
i. Fat vacuoles present
ii. Foamy appearance
f. Absence of Apo B containing plasma lipoproteins; Apo B gene is normal
g. Clinical picture:
i. Failure to thrive
ii. Steatorrhea
iii. Diarrhoea
iv. Fat soluble vitamin deficiencies
1) Vitamin E: Acanthocytes, ataxia, retinitis pigmentosa
126. Phenytoin:
a. Enzyme inducer - Increases the metabolism of Warfarin
127. Amiodarone + Cimetidine:
a. Cimetidine also has potent anti androgenic effects
b. Enzyme inhibitor - Decreases metabolism of Warfarin
c. Amiodarone + Warfarin = Rx of Atrial Fibrillation; hence important to keep this
d. Other
toxicityenzyme
in mindinhibitors: metronidazole and TMP-SMX
b. Pancreatic acini
c. Intestinal glands (not ectopic then is it lol)
d. Endometrial tissue
131. Stacked brick pattern of intestinal adhesion - EAEC; developing countries infants
133. Gastric tissue supplied by short gastric arteries at risk of ischemia (poor anastomoses)
a. Region of the proximal greater curvature above the splenic artery
137. HBV is an enveloped virus, has partially circular dsDNA; and also has reverse transcriptase
a. Nucleocapsid core + Outer lipoprotein envelope
b. DNA (repaired in the nucleus) --> (+)RNA --> DNA
c. Has no direct cytopathic effect
d. Proliferative phase
i. HBsAg and HBcAg expressed with MHC-I on hepatocyte surface
ii. Increases CD8+ T cell response
e. Integrative phase
i. HBV DNA incorporated into host genome of surviving hepatocytes; risk of HCC
stays the same.
ii. HBV can't however cause HCC without integrating with hepatocyte DNA
1) HBx protein - activates synthesis of IGF -II and IGF-I receptors; hence
stimulating cell proliferation.
2) Suppression of p53 (but this effect isn't by HBeAg!!)
3) Basically - you need integration of viral genome into host cells!
148. Achalasia:
a. Bird beak appearance
b. Dysphagia
c. Regurgitation, chest pain, weight loss
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c. Regurgitation, chest pain, weight loss
d. Heart burn
149. Normal Esophageal manometry:
i. Cricopharyngeus contracts --> Peristalsis in the esophagus --> LES relaxes
a. Achalasia:
i. Normal cricopharyngeal tone (vs cricopharyngeal dysfunction --> Choking
sensation, pain during swallowing, Dx: video fluroscopy)
ii. Decreased amplitude of peristalsis
iii. No LES relaxation
b. Diffuse esophageal spasm:
i. Multiple irregular contractions from middle to lower esophagus
c. GERD:
i. Decreased LES pressure; it fails to contract after transfer of food to stomach
157. Alkylating agents - Black tarry stools; since rapidly dividing cells are damaged (hair, skin,
mucosa of GIT)
158. Autoimmune hepatitis - Antigenic mimicry with self antigen recognizing CD4+ T cells
160. Chronic NSAID use - increased risk for GI blood loss (+ fecal occult blood test)
163. HNPCC
a. Lynch I and Lynch II (Lynch II - colon + extraintestinal)
b. Defect in DNA mismatch repair
i. MLH 1, MSH 2, MSH 6, PMS 2
ii. Mechanism of action:
1) MutS detects a mismatch by checking the methylation status.
a) Methylated = paternal
b) Non-methylated = daughter
2) Mut S recruits MutL; Endonuclease makes occasional nicks in the
daughter strand;
3) Exonuclease 1 removes the mismatched region (and a bit more either
side). ssDNA binding proteins stabilise the single strand.
4) DNA polymerase delta (5' --> 3') makes a new strand, ligase seals the
remaining nick.
c. Causes colon and endometrial carcinoma
d. Features:
i. Right sided colon cancers
ii. Multiple cancers
iii. Arise from macroscopically normal areas
1) Mucosa here is however dysplastic
165. Colorectal carcinoma associated with intake of charred / fried foods; Gastric carcinoma
with Alcohol, tobacco, dietary nitrates and H pylori infection.
175. Pigment stones - increased activity of beta glucuronidase; enzyme deconjugates bilirubin.
Free bilirubin complexes with calcium, and precipitates in the bile.
a. Enzyme is released by bacteria and damaged hepatocytes
176. Vitamin A required to maintain mucous secreting columnar epithelium and other
specialised epithelia; deficiency leads to squamous metaplasia to keratinizing epithelium
181. Pancreatic cancer [this question was testing your knowledge of neoplasia]
a. Palpable gallbladder, non tender
b. Adenocarcinoma of the head of pancreas, probably compressing common bile duct
i. Obstructive jaundice symptoms
c. Adenocarcinoma of tail --> Late onset symptoms, only when splanchnic plexus
invasion takes place.
d. Risk factors:
i. Age (6th and 7th decade)
ii. Smoking
iii. Diabetes
iv. Chronic pancreatitis (heavy alcohol consumption; not moderate)
v. Genetic: MEN, Hereditary, HNPCC and FAP sometimes
c. Normal:
i. Food bolus distends the esophagus
ii. This stimulates contractions to start just above the bolus
iii. Propels the food down
d. DES:
i. Several segments of the esophagus contract simultaneously
ii. No propogation of food forward
iii. Manometry:
1) Disorganised non peristaltic contractions
2) Large amplitude and duration
iv. Corkscrew esophagus on barium
v. Typically not associated with exertion and isn't relieved by rest / food
1) Do a cardiac work up to exclude that shit though
171. Healthy patient + GI bleed --> ↑ BUN; (vs decreased BUN in hepatic failure GI bleeds. This
happens because NH3 cant be converted to Urea in hepatic failure)
172. Hepatic encephalopathy
a. Sequalae of Hepatic failure
b. BUN is low; NH3 is high
c. ↑NH3 alters amino acid transport across the blood brain barrier. Decreased
glutamate and catecholamine release, increase in GABA
d. Flapping tremor (Asterixis)
e. Precipitating factor:
i. Drugs (Sedatives, narcotics)
ii. Hypovolemia (diarrhea and vomiting)
iii. Excessive nitrogen load
1) GI bleeding, Constipation, Too much protein
2) Bacteria convert proteins into NH3
3) Portal shunting (capillarisation of sinusoids) leads to reduced conversion
of NH3 to urea
iv. Infections
1) Pneumonia, UTI, Spontaneous bacterial peritonitis
v. Metabolic
1) Hypokalemia (stimulates renal NH3 production), Metabolic alkalosis
(NH3>NH4+), Hypoglycema [why?]
vi. TIPS (shunting) will make things worse!
f. Rx:
i. Stop offending agent / drug
ii. Lactulose - bacterial action leads to acidification
1) Breakdown to lactic acid + acetic acid
2) NH3 trapped as NH4+ --> Luminal distention & osmotic defect (out via
potty)
iii. Rifamixin - Kills bacteria
175. Octreotide - causes B12 deficiency (by decreasing gastric secretion of intrinsic factor)
176. Wilsons disease - Basal ganglia atrophy (Hepatolenticular degeneration)
a. <30 years of age + chronic hepatitis
b. No predisposition to pancreatitis though
c. Neurological symptoms:
i. Parkinsonism like tremor
ii. Ataxia & slurred speech
iii. Personality changes (depression / paranoia)
iv. Rigidity and catatonia
d. Liver disease (increased AST / ALT)
e. ATP7B gene mutation; Chr 13
f. Excess circulating free copper; causes damage to cells via ROS generation
i. May cause Fanconi syndrome
g. Dx:
i. Liver biopsy; quantitative demonstration of copper > 250 mcg/g dry weight
ii. Low Ceruloplasmin
iii. Increased Cu excretion
iv. Kayser Fleischer rings (cornea) identified on slit lamp examination
h. Rx:
i. Penicillamine (Cu chelator) + Triethylenetetramine (trientine)
187. Pringle maneuver - pinching the hepatoduodenal ligament to identify source of bleed
a. If bleeding doesn’t stop:
i. IVC bleed
ii. Hepatic vein bleed
b. Venous bleeds are non-pulsatile; arterial bleeds are pulsatile
190. Selective COX2 inhibitors - anti-inflammatory effects and spares the GI mucosa (helps
reduce GI ulceration)
a. Does not inhibit platelet aggregation (Platelet function is COX1), useful in some
cases but can predispose to CVS events.
b. Worsens renal impairment, hypertension and angina.
194. Damaged hepatocytes - impaired ability to extract bile acids from portal blood;
195. Pancreatic secretin stimulation:
a. Increased flow rate of secretions
i. Increased HCO3-, decreased Cl-
1) Counter transporter at apical membrane of pancreatic ductal cells
2) Stimulated by secretin
ii. Same conc of Na and K as plasma (isotonic) [vs intestinal secretions, where at
high HCO3- excretion, there is an increased K+ excretion]
206. Xanthelasmas
a. Contains lipid laden macrophages (foam cells)
b. Papules, yellow (due to its location in the superficial dermis)
c. Associated with
i. Primary / Secondary hyperlipidemia
ii. Chronic cholestatic processes
1) Obstructive biliary lesions
2) Primary biliary cirrhosis
210. Carcinoma of distal colon - annular lesions (grow within the walls)
a. Leads to bowel constricton
b. Heaped up edges
c. Ulcerated central region
d. Risk factors:
i. Age
ii. FAP
iii. Sporadic?
iv. Inflammatory bowel disease
212. GERD:
a. Nocturnal cough, dysphagia, sore throat = GERD
b. Heartburn may or may not always be present
c. Pathophysiology:
i. Decreased LES tone
ii. Acid refluxes into the esophagus - epithelial repair initiated
iii. High risk of metaplasia
d. Characteristic histological findings:
i. Erosions / ulcerations if severe
ii. Basal zone hyperplasia
iii. Elongation of the lamina propria papillae
iv. Inflammatory cells
1) Neutrophils
2) Eosinophils
3) Lymphocytes
e. Diagnosis by upper GI endoscopy, and pH testing
213. All acute viral hepatitis have the same histopathological findings
a. Ballooning degeneration
b. Panlobular lymphocytic (mononuclear) infiltrates (look at that image in notes)
c. Hepatocyte apoptosis; councilman bodies (pink staining)
d. Regenerative attempts [chronic hepatitis; not HAV]
i. Pseudoacini of dividing hepatocytes
ii. Numerous mitotic figures
216. Mesenteric ischemia - bowel is dusky red in colour; ecchymosis (subserosal) + edema may
be present
217. Peritonitis
a. Intestinal perforation
b. Bacterial peritonitis:
i. Peritoneal surfaces with white-yellow suppurative exudate
222. Black stones = sign of hemolysis; excess CB --> converted to UCB (I'm assuming by beta
glucuronidase) which combines with Ca --> Calcium bilirubinate stones.
223. Acetaminophen liver damage occurs after a latent period; prevented by N-acetyl cysteine
(Glutathione donor)
230. Intussusception
a. Impaired venous return from invaginated segment of bowel --> Ischemia and
necrosis of the intestinal wall
b. Clinical presentation
i. Intermittent abdominal pain
ii. Nausea and vomiting
iii. RLQ palpable mass maybe?
iv. Bright red stools + mucous (currant jelly)
c. Sites and causes:
i. Most commonly at the ileocolic junction (size difference btw bowels)
ii. Most common in children < 2 years old
iii. Age >2 years:
1) Meckels
2) Foreign body
3) Intestinal tumour
d. Barium enema (both diagnostic and therapeutic); else surgery
231. Secretin released from S-cells in the crypts of Lieberkuhn once stimulated by the delivery
of acidic chyme (pH < 4.5)
a. Pancreas stimulated to release HCO3- and Water
b. Does not have any role to play in release of exocrine pancreatic enzymes (that's the
job of CCK)
c. Also promotes insulin release
233. Squamous cell carcinoma of Head and Neck - usually associated with tobacco and alcohol
abuse.
a. Site of development
i. Ventral tongue
ii. Floor of mouth
iii. Lower lip
iv. Soft palate + gingiva
235. Bile salts are emulsifying agents; hence can disrupt the surface membrane of bacteria
(gram negative enterics)
a. Look out for increased bacterial proliferation in those with obstructed CBD
237. Multiple, rapidly appearing acanthosis nigricans (brown, black thickened plaques) is a sign
of malignant gastric cancer.
a. Or liver / lung cancer too (but classically gastric cancer)
Cholecystokinin I cells
GIP K cells
245.
Somatostatin D cells (pancreatic islets + intestine)
GLP-1 L cells
246. Tongue innervation:
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246. Tongue innervation:
a. Anterior and posterior parts are delineated by the terminal sulcus (with the foramen
cecum in the midline)
b. Motor:
i. Hypoglossal nerve (XII)
ii. Palatoglossus - Vagus(X)
c. General sensory:
i. Anterior 2/3 of the tongue - Mandibular branch of trigeminal (V)
ii. Posterior 1/3 - XI
iii. Root of the tongue - X
d. Taste:
i. Anterior 2/3 - Chorda tympani (VII)
ii. Posterior 1/3 - CN IX
iii. Posterior area of root of tongue (CN X)
a. Diffuse
i. Signet ring cells
ii. Loss of E-cadherin
iii. Leather bottle appearance, infiltrate the stomach wall
iv. Risk factors:
1) Chronic gastritis
2) Barret esophagus
3) H pylori, nitrate consumption, no fruits and vegetables, cigarette smoke
b. Intestinal
i. Similar to colonic carcinoma
ii. Arises from precursor lesions
iii. Intraluminal expansion
249. GI irritation induced nausea and vomiting (mediated by increased activation of 5HT3
(serotonin) receptors on vagal and spinal afferent nerves:
a. Relay to the medullary vomiting center --> Emesis
b. 5HT3 receptor antagonists (Ondansetron) useful in these conditions
i. Travelers diarrhoea / Chemo / General anaesthesia
c. Side note:
i. Dopamine receptor antagonists also act as antiemetics (more useful in central
neural causes of nausea)
1) Metoclopramide, promethazine
2) Very toxic:
a) Sedation
b) Extrapyramidal side effects
ii. First generation H1 antagonists are useful in treating nausea due to vestibular
sickness (Diphenhydramine, meclizine) and ach antagonists (scopolamine)
1) Significant sedation
250. Campylobacter:
a. Transmitted from domestic animals to humans
i. Puppies, cattle, sheep, chickens
ii. Contaminated food (undercooked poultry, unpasteurized milk)
b. Curved rod; corkscrew motility
c. Tenesmus and abdominal cramping
d. Invasive + inflammatory diarrhoea; blood may be present
254. Vitamin A - stored in the perisinusoidal stellate cells (ito cells); lasts 6 months