Beruflich Dokumente
Kultur Dokumente
org/wiki/Ramachandran_plot
Ramachandran plot
From Wikipedia, the free encyclopedia
1 of 4 11/11/2010 6:29 PM
Ramachandran plot - Wikipedia, the free encyclopedia http://en.wikipedia.org/wiki/Ramachandran_plot
2 of 4 11/11/2010 6:29 PM
Ramachandran plot - Wikipedia, the free encyclopedia http://en.wikipedia.org/wiki/Ramachandran_plot
One can also plot the dihedral angles in polysaccharides and other polymers in this fashion. For the first two
protein side-chain dihedral angles a similar plot is the Janin Plot.
Software
Ramachandran plot 2.0 (http://dicsoft1.physics.iisc.ernet.in/rp)
Web-based tool showing Ramachandran plot of any PDB entry (http://www.fos.su.se/~pdbdna
/input_Raman.html)
STING
3 of 4 11/11/2010 6:29 PM
Ramachandran plot - Wikipedia, the free encyclopedia http://en.wikipedia.org/wiki/Ramachandran_plot
References
1. ^ RAMACHANDRAN GN, RAMAKRISHNAN C, SASISEKHARAN V (July 1963). "Stereochemistry of
polypeptide chain configurations". J. Mol. Biol. 7: 95–9. PMID 13990617 (http://www.ncbi.nlm.nih.gov/pubmed
/13990617) .
S. Hovmöller, T. Zhou & T. Ohlson (2002) Conformations of amino acids in proteins. In: Acta Cryst. vol.
D58, p. 768-776.
External links
DynoPlot in PyMOL wiki (http://www.pymolwiki.org/index.php/DynoPlot)
Link to Ramachandran Plot Map of alpha-helix and beta-sheet locations (http://www.cryst.bbk.ac.uk
/PPS95/course/3_geometry/rama.html)
Link to Ramachandran plot calculated from protein structures determined by X-ray crystallography
compared to the original Ramachan. (http://www.fos.su.se/~svenh/index.html)
Proteopedia Ramachandran Plot (http://www.proteopedia.org/wiki/index.php/User:Karl_Oberholser
/Ramachandran_Plots#Ramachandran_Plots)
Retrieved from "http://en.wikipedia.org/wiki/Ramachandran_plot"
Categories: Biochemistry methods | Plots (graphics)
4 of 4 11/11/2010 6:29 PM