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Use of a Structured Kinetic Model of

Antibody Synthesis and Secretion for


Optimization of Antibody Production
Systems: I. Steadystate Analysis
Theodora A. Bibila*
Department of Chemical Engineering and Materials Science and Institute for
Advanced Studies, in Biological Process Technology, University of Minnesota,
St. Paul, Minnesota 55108
Michael C. Flickinger'
Department of Biochemistry and Institute for Advanced Studies in Biological
Process Technology, University of Minnesota, St. Paul, Minnesota 55108
Received January 21, 199IIAccepted June 26, 1991

Steady-state simulations using our previously developed developed and experimentally validated a structured
structured kinetic model of antibody synthesis and secre- kinetic model describing the main intracellular steps of
tion by hybridoma cells are used here in conjunction with the monoclonal antibody secretory Tran-
factorial design analysis to identify intracellular parameters
important in determining the specific antibody secretion scription of mRNAs coding for the heavy and light anti-
rate and predict the dependence of this rate on cell spe- body chains, their translation, assembly of the heavy and
cific growth rate. Simulation results suggest that the spe- light chains to give the tetrameric antibody m~lecule,~
cific growth rate, the assembly rate of the heavy and light intraorganelle processing and interorganelle transport of
chains and the heavy- and light-chain gene dosage can sig- the antibody, and final secretion4 were considered.
nificantly affect the rate of antibody secretion. Based on
these results, environmentaland/or genetic manipulation ap- Although attempts to describe individual steps of pro-
proaches are proposed for maximizing the specific antibody tein biosynthesis and the secretory pathway for secreted
secretion rate and the antibody volumetric productivity in proteins have been previously reported in both procary-
large-scale antibody production systems.
Key words: monoclonal antibody secretory pathway
structured kinetic model factorial design steady-state
- otic and eucaryotic system^,^^,^^,^^ here we report the re-
sults of steady-state model simulations of behavior of
simulations the entire pathway of MAb synthesis, assembly, inter-
organelle transport, and secretion. A summary of the
model equations (i.e., the intracellular balances of path-
INTRODUCTION way intermediates) previously r e p ~ r t e dis
~ .included
~ in
Optimization of the volumetric productivity of mono- the Appendix.
clonal antibody (MAb) secretion in large-scale hybri- Here, the model is used as a tool to identify the pre-
doma cultivation systems (micrograms of antibody per dominant factors that affect the specific antibody secre-
unit volume of reactor per unit time) depends on (1) the tion rate, predict the growth rate dependence of the
specific antibody secretion rate (micrograms of anti- specific antibody secretion rate, and gain a better in-
body per cell per unit time) and (2) the concentration of sight into possible environmental or genetic manipula-
viable cells in the culture that actively secrete antibody tion approaches that would maximize this rate. As an
(viable cells per unit volume of reactor). While the sec- initial approach, steady-state model simulations are pre-
ond point can be directly addressed by appropriate sented and the sensitivity of the secretion rate to
bioreactor and/or growth medium design, optimization changes in different model parameters under these con-
of the specific antibody secretion rate requires a thor- ditions is analyzed by use of a factorial design al-
ough understanding of the regulation of the pathway of gorithm. The simulation results are used to propose
antibody secretion. approaches to optimize the secretion rate and the over-
As a first step in better understanding the cellular all volumetric productivity in large-scale antibody pro-
regulation of the biosynthesis and secretion of mono- duction systems. These approaches may also be useful
clonal antibody by hybridoma cells, we have previously for optimization of protein synthesis and secretion from
other lymphoid cells.24
This work was presented at the 1990 American Institute of Previous to this work, efforts to maximize antibody
Chemical Engineers (AIChE) Annual Meeting, Chicago Illinois.
* Current address: Merck Sharp & Dohme Research Labora- secretion have focused on the effect of extracellular
tories, P.O. Box 2000, Rahway, NJ 07065-0900. nutrients or environmental parameters on hybridoma
To whom all correspondence should be addressed. growth and metabolism (pH, temperature, dissolved

Biotechnology and Bioengineering, Vol. 39, Pp. 251-261 (1992)


0 1992 John Wiley & Sons, Inc. CCC 0006-3592/92/030251-11$04.00
oxygen concentration, serum, carbon and energy The steady-state intracellular pool of free (unassembled)
sources, and inhibitory growth by-products such as light chains, [L],,, is given by solving the following third-
lactate and ammonia).22.29.32.34,35,40,46,55.56,62 The unstruc- order equation
tured and structured kinetic models previously devel-
oped by other investigators to describe hybridoma and A . [L]:, + B . [L]:, + C . [L],, + D = 0 (4)
mammalian cell systems in general are primarily growth where
models.',11361In contrast, our approach to maximizing
antibody secretion focuses on the intracellular pathway
for antibody synthesis to identify specific pathway steps
important in determining the overall secretion rate.
Once such a step(s) has been identified, the growth
medium composition or culture environment may be
changed or posttranscriptional steps in the secretory
pathway may be genetically manipulated to maximize
the rate of this step(s) and thereby the rate of antibody
secretion.

RESULTS AND DISCUSSION Equation (4)was solved using Graeffe's root squaring
method for numerical solution of nonlinear algebraic
Steady-State Model Solution equations." For the parameter values used in these simu-
As an initial approach, a steady-state assumption was lations, there was always one positive real root; the
used specifying that there is no intracellular accumula- other two roots of Equation (4) were either negative or
tion of any of the species involved in the antibody secre- complex. Having determined [L],,, the steady-state in-
tory pathway, i.e., no intracellular accumulation of the tracellular concentrations of all antibody assembly in-
heavy- and light-chain coding mRNAs, the heavy- and termediates as well as the antibody concentrations in
light-chain polypeptides, and the antibody assembly the endoplasmic reticulum (ER) and the Golgi and the
and transport intermediates. Savinell et al.52have previ- steady-state specific antibody secretion rate can be cal-
ously determined a range for the steady-state theoretical culated from
maximum specific antibody secretion rate based on the
maximum theoretical capacity of the transcriptional
and translational machinery in the cell; however, in that
analysis only simplified intracellular balances of im-
munoglobulin mRNAs and polypeptides were consid-
ered with no detailed description of all the steps in the
intracellular secretory pathway.
For the steady-state solution of the system of model
equations [Equations (i)-(x) in the Appendix], the in-
tracellular accumulation terms (d/dt)were set equal to
zero and the resulting set of equations solved analyti-
cally. It should be noted that the model assumes that
there is no proteolytic or other degradation of the heavy-
and light-chain polypeptides in the cell and also that no Model Parameter Values
free heavy or light chains or assembly intermediates es- For the steady-state simulations, model parameter values
cape from the endoplasmic reticulum during processing. were varied based upon either experimental results ob-
The steady-state intracellular pools of heavy and light tained with the 9.2.27 hybridoma cell or data
mRNAs ([mHIssand [mLlsS),and free (unassembled) reported in the literature for immunoglobulin secre-
heavy chains ([HI,,) are given by ting myeloma or hybridoma cells. The specific growth
rate was varied between 0 and 0.04 h-'; 0.04 h-' is the
[~H]SS = NH' S H / ( K p) (1)
maximum specific growth rate determined during expo-
[ ~ L =I NL
~ .~S L / ( K + p ) (2) nential growth of 9.2.27 hybridoma cells." During cul-
tivation of 9.2.27 hybridoma cells in a total cell recycle
perfusion bioreactor, growth rates of populations of cells
at high viability very close to zero have been experimen-
tally attained.18
The number of heavy- and light-chain gene copies/
cell ( N Hand N t ) was set equal to 1. In both myeloma

252 BIOTECHNOLOGY AND BIOENGINEERING, VOL. 39, NO. 3, FEBRUARY 5, 1992


and normal spleen cells (the two partners in hybri- somes associated with the heavy and light mRNAs
doma fusions) usually only one of the two heavy and (ribosome loading) and the speed with which each ribo-
one of the two light-chain alleles are productively rear- some is moving along the mRNA m ~ l e c u l eIt. ~has been
ranged and transcribed into functional heavy- and light- previously shown that in immunoglobulin secreting cells
chain mRNAs, respectively, a phenomenon known as heavy- and light-chain specific translation rates decrease
allelic e x c l ~ s i o n . ~The
' , ~ ~ remaining allele is either un- with entrance of cells from the exponential into the sta-
rearranged (remains in the germline configuration) or tionary growth phase and that this decrease is due to a
unproductively rearranged. Since myelomas used for decrease in the ribosome loading on the heavy and light
generating hybridoma fusions usually undergo a process ~ R N A s . ~In' our own experiments, we have found that
of selection for nonproductivity before fusion with the the total cellular RNA content of 9.2.27 cells decreases
spleen cells, the productively rearranged copies of the linearly with decreasing specific growth rate during the
heavy- and light-chain genes from the myeloma parent course of batch c ~ l t i v a t i o nTotal
. ~ cellular RNA is pri-
are lost during this process. The resulting hybridoma marily ribosomal RNA ( 8 0 4 5 % ) and could thus be con-
cells therefore inherit only one copy of each of the func- sidered as a measure of the availability of ribosomes to
tional heavy- and light-chain genes from their spleen be used in translation. In the simulations presented here,
cell parent, suggesting that NH = Nt = 1. In order to the ribosomal loading of the heavy and light mRNAs
examine the effect of gene dosage on the specific anti- (and thereby the heavy- and light-chain specific transla-
body secretion rate, NH and NL were varied from 1 to 5 tion rates) was varied linearly with specific growth rate
to 10 copies/cell. The number of copies of immunoglobu- proportional to the experimentally observed linear vari-
lin coding genes that can be stably integrated in the ation of total cellular RNA content.
genome of lymphoid cells following transfection with The heavy- and light-chain assembly rate constant was
appropriately designed plasmid vectors and successfully varied between lo-'' and ((molecules/cell) . h)-'. To
expressed is between 1 and 10 for both heavy- and light- our knowledge no one has experimentally measured
chain genes.I3 The heavy- and light-chain gene copy in vivo assembly rate constants as a function of growth
number can be further increased up to 200 copies/cell rate or culture conditions in the antibody or any other
by use of amplification systems such as the dihydrofolate multimeric glycoprotein secretory pathway for that
reductase (DHFR)/methotrexate (MTX) amplification matter. Instead, the assembly time for heavy and light
system.25x37 At very high gene copy numbers, transcrip- immunoglobulin chains, i.e., the time required for com-
tion and expression may be limited by the intracellular plete assembly of a given intracellular pool of heavy
concentration of factors necessary for t r a n ~ c r i p t i o nIt. ~ ~ and light chains have been determined in vivo in expo-
has been suggested that the transcriptional and trans- nentially growing cells by pulse-chase experiments.
lational machinery of a typical lymphoid cell could This time is between 10 and 20 min; however, its depen-
support the expression of up to 60 immunoglobulin dence on cell growth rate and culture conditions has not
coding genes.37 been studied.' Determination of the assembly rate con-
The specific transcription rates of the heavy- and stant K A from such assembly time data is not straight-
light-chain coding mRNAs were taken as 3000 and forward since the experimentally determined assembly
4500 mRNA molecules/gene/h, re~pectively.~~ For the time is a function of both K A and the intracellular
simulations at high heavy- and light-chain gene copy heavy- and light-chain concentrations. In the absence
numbers ( 5 and 10 copies/cell) it is assumed here that of any literature data on assembly rate constant values,
the extra copies of the heavy- and light-chain genes are the range of KA values used in our model simulations
transcribed as efficiently and at the same rate as the was chosen so that the resulting characteristic assembly
endogenous heavy- and light-chain genes. However, the times predicted by the model are between 10 and
transcription efficiency of transfected genes is often 20 min, close to the experimentally reported assembly
dependent on the site of their integration in the chromo- times. The half-times for ER-to-Golgi transport and
some and is usually lower than the transcription effi- Golgi-to-extracellular-medium transport were varied
ciency at the endogenous gene between 30 and 60 min and 5 and 20 min, respectively.
The half-lives of the 9.2.27 heavy- and light-chain These ranges are typical for ER-to-Golgi transport and
mRNAs have been previously determined as a function Golgi-to-medium transport in constitutive secretory
of the growth state of 9.2.27 cells.3 Heavy- and light- pathways. 14,21,27,44,45,59,63,64
chain mRNA half-lives were found to be statistically
the same, with their values decreasing from about 12 h
Factorial Design Analysis
in the exponential phase of growth to about 6 h in the
stationary growth phase.3 In the model simulations pre- In order to quantitate the relative effects of different
sented here, the heavy- and light-chain mRNA half- model parameters on the steady-state specific anti-
lives were varied linearly with specific growth rate. The body secretion rate as well as the extent of parameter
specific translation rates of the heavy and light chains interaction, simulation results were analyzed using a
were determined by the number of translating ribo- 2' factorial d e ~ i g n In
. ~ this analysis, a minimum and a

BlBlLA AND FLICKINGER: STEADY-STATE ANALYSIS OF A STRUCTURED MODEL 253


maximum value for each one of the five variable parame- The results of the factorial design analysis (Table I)
ters in the model (heavy- and light-chain gene dosage, suggest that the heavy- and light-chain gene dosage, the
growth rate coupled with heavy- and light-chain spe- assembly rate, and the growth ratehranslation rate are
cific translation rates, assembly rate constant, half-time the parameters that mostly affect the specific antibody
for ER-to-Golgi transport, and half-time for Golgi- secretion rate. However, due to considerable interactions
to-extracellular-medium transport) was considered, as between these parameters, no definite statement can be
described above. The steady-state specific antibody se- made about the effect of each parameter alone. There is
cretion rate was calculated for all possible combinations a strong interaction between the specific growth rate
(z5 = 32) of parameter values. Yates’s algorithm’ was and the assembly rate constant (12,395). There is also a
then used to calculate the relative effects of each one strong interaction between the heavy- and light-chain
of the parameters on the steady-state specific antibody gene dosage and the assembly rate constant (10,145)and
secretion rate as well as the extent of interaction be- a considerable interaction between the gene dosage and
tween any two, three, four, or all five of the parameters the specific growth rate (3814). As far as higher order
(Table I). The relative effect of each parameter on the interactions (interactions between more than two pa-
specific antibody secretion rate would be equivalent to rameters), the three-parameter interaction between
a normalized (dimensionless) “sensitivity coefficient” growth rate, assembly rate constant, and gene dosage
showing the fractional change in the steady-state spe- appears to be important (10,145).
cific antibody secretion rate mediated by a fractional In order to visualize the quantitative effect of each
change in the parameter of interest. one of the model parameters on the specific antibody
secretion rate, the steady-state specific antibody secre-
Table I. Estimated relative effects of model parameters on the
steady-state specific antibody secretion rate from a 2’ factorial tion rate was plotted as a function of the specific growth
design. rate and a range of values of the parameter of interest.
~ ~ ~~~~

The results of this analysis are discussed in the follow-


1 2 3 4 5 Identity Relative Effect ing sections.
Average -
+ - - 1 4 6 31
- + - 2 12,395 Effect of Heavy- and Light-Chain Gene Dosage on
+ + - 12 12,395 Specific MAb Secretion Rate
- - + 3 -173
+ - + 13 - 173 To predict the effect of the gene dosage (gene copies/
- + + 23 -171.4 cell) of the heavy- and light-chain genes on the specific
+ + + - 123 -171.4
antibody secretion rate, specific secretion rate vs. spe-
+ 4 - 89
+ 14 - 89 cific growth rate simulation profiles were generated for
+ 24 -88 1, 5, and 10 copies/cell of the heavy- and light-chain
+ + - + 124 - 88 genes. Figure 1 shows the simulation results for two val-
- - + + 34 1.2 ues of the assembly rate constant and lo-’’ ((mole-
+ - + + 134 1.2
cules/cell) * h)-’, resulting in positive or negative corre-
- + + + 234 1.2
+ + + + 1234 1.2 lation between secretion rate and growth rate, respec-
- - - - 5 16,709 tively (as discussed below). In both cases, the specific
+ - - - 15 3,814 secretion rate at a given specific growth rate increases
- + - 25 10,145 with increasing gene copy number. However, an in-
+ + - 125 10,145
- - + 35 - 141.9 crease in gene copy number does not result in a propor-
+ - + 135 -141.9 tional increase in the specific secretion rate except for
- + + - 235 -140.3 the case of specific growth rate equal to zero. For growth
+ + + - 1235 -140.3 rates higher than zero the predicted increase in specific
- - - + 45 - 73
secretion rate is higher than what would be predicted by
+ - - + 145 -73
a simple proportional relationship. This deviation from
- + - + 245 -72.3
+ + - + 1245 -72.3 a proportional reistionship increases with increasing
- - + + 345 1 growth rate. For example, for KA = ((molecules/
+ - + + 1345 1 cell) * h)-’ (Fig. la) at the maximum specific growth rate
- + + + 2345 1
of 0.04 h-’, the specific secretion rate increases by 6.5-
+ + + + 12345 1
and 14-fold with increases of the gene copy number to 5
Note: Parameters 1-5 correspond to the specific growth rate and 10 copies/cell, respectively. In the case where KA =
(coupled with the heavy- and light-chain translation rates), the as- lo-’’ ((molecules/cell) h)-’ (Fig. lb), at the maximum
sembly rate constant (&), the ER-to-Golgi transport half-time specific growth rate, the specific secretion rate increases
( t l , z , E R ) , the Golgi-to-extracellular-medium transport half-time
( t l i z . c )and , the heavy- and light-chain gene dosage ( N H= N L ) re- by 90- and 400-fold with increases of the gene copy num-
spectively. The pluses and minuses represent the maximum and ber to 5 and 10 copies/cell, respectively. It therefore
minimum values of each parameter, respectively. appears that heavy- and light-chain gene dosage has a

254 BIOTECHNOLOGY AND BIOENGINEERING, VOL. 39, NO. 3, FEBRUARY 5, 1992


bly rate until a plateau (saturation) level is reached. At

k=F
- I I

N=10 this point, an increase in the assembly rate constant


does not result in further increase of the specific secre-
tion rate. At very low assembly rates only a small per-
centage of the free heavy and light chains available for
assembly in the ER are actually assembled, resulting in
very low rates of secretion of assembled antibody. As
the assembly rate constant increases, the specific anti-
body secretion rate increases, suggesting that under
these conditions it is the value of the assembly rate con-
stant that determines secretion rate. Once the plateau is
reached, increases in the assembly rate constant do not
accelerate the assembly rate and consequently do not
accelerate secretion; at this point some other step in the
secretory pathway plays the dominant role in determin-
ing the specific antibody secretion rate.
As the growth rate increases, the value of the assem-
bly rate constant at which a plateau is reached increases
and so does the value of the specific antibody secretion
rate corresponding to the plateau. At a growth rate equal
Specific growth rate (l/hr) to 0.004 h-' (10% of the maximum growth rate deter-
Figure 1. Effect of heavy- and light-chain gene dosage on steady- mined for the 9.2.27 hybridoma), the plateau is reached
state specific antibody secretion rate for specific growth rates 0 at an assembly rate constant value of about 5 x lo-",
to pmax (0.04 h-I): (a) K A = molecule-' cell h; (b) K A = whereas at the maximum specific growth rate (0.04 h-')
lo-'' ((molecules/cell) . h)-'.
this assembly rate constant value is close to sug-
stronger effect on secretion rate at low assembly rate gesting that at low growth rates the specific antibody
constant values. secretion rate could only marginally be improved by in-
creases in the assembly rate constant. As the specific
growth rate decreases, the heavy- and light-chain trans-
Effect of Heavy- and Light-Chain Assembly Rate on lation rates also decrease and start to play an increas-
Growth Rate Dependence on Specific MAb
Secretion Rate ingly important role in the determination of the specific
antibody secretion rate. The results in Figure 2 would
The effects of the assembly rate constant on the specific therefore suggest that in fast-growing cells assembly is
antibody secretion rate are summarized in Figure 2, a very good candidate for the controlling step in anti-
where the steady-state specific antibody secretion rate is body secretion, whereas in slowly growing cells anti-
plotted for various assembly rate constant values as a body secretion is most likely controlled at the level of
function of specific growth rate. For each specific growth translation.
rate, very low assembly rate constant values result in It is also interesting to note the existence of an in-
very low specific antibody secretion rates, with the flection point at an assembly rate constant value of 2 x
specific secretion rate increasing with increasing assem- 1O-lO-3 x lo-'' ((molecules/cell) . h)-'. For assembly
rate constant values greater than that corresponding to
n
1.5E7 the inflection point (5 x lo-'' to 5 x molecule-'
cell h), there is positive correlation between secretion
\
2 rate and growth rate. For assembly rate constant values
/ I
lower than that corresponding to the inflection point
(lo-" to lo-'' ((molecule/cell) * h)-', there is a negative
correlation between secretion rate and growth rate.
p= 0.004 hr -1 5.OE6
Near the inflection point, the specific secretion rate is
essentially independent of growth rate. Secretion rates
negatively correlated with specific growth rate are lower
than about 5 x lo6 molecules/cell * h whereas secretion
. -.-
1E-12 1E-11 lEL.10 1E-Q 1E-8 1E-7 1E-6 rates positively correlated with specific growth rate are
Assembly rate constant between 5 x lo6 and 1.5 x lo7 molecules/cell . h. The
theoretical maximum antibody secretion rate, based on
Figure 2. Steady-state specific antibody secretion rate as a func-
tion of the assembly rate constant ((rnolecules/cell) . h)-' for spe- the limitations of the cell's translational machinery, has
cific growth rates 0.004 h-'to pmar(0.04 h-'); f l 1 2 . E R = 42 min and been calculated to be on the order of 1 x lo7-3 x
t 1 / 2 , ~= 20 min. lo7molecules/cell h." All the secretion rates predicted

BlBlLA AND FLICKINGER: STEADY-STATE ANALYSIS OF A STRUCTURED MODEL 255


by the model are close to or lower than this theoreti-
cal maximum.
The ability of the model to predict the correlation be- 1E9
tween specific antibody secretion rate and specific
growth rate depending on the assembly rate constant
i
value may provide for the first time a useful mecha-
nistic explanation of the variety of secretion rate trends
in experimental data reported in the literature. Experi-
mental reports on the dependence of specific antibody
secretion rate on cell growth rate suggest a posi-
C L ! 1E7
tive,6,8,12,15,17,19,35,41,46,48,51,53,57,60 negative,8,16.2x,47,49
or lack I
0.00 0.01 3 0.02 E
0.03 0.04 6
of c ~ r r e l a t i o n between
~ ~ ' ~ ~ ~the~ secretion rate and the
cell growth rate. Specific g r o w t h rate (l/hr)
In all these cases, the reported specific antibody se- Figure 4. Effect of the assembly rate constant on the intracellular
cretion rates range from 5 x lo5 to 3 x 10' molecules/ steady-state heavy-chain levels for specific growth rates 0 to pmax
cell . h. This range is essentially the same as the range (0.04 h-'); t1/2,ER = 42 min and t l l 2 . G = 20 min. Curves from top to
of secretion rates predicted by our model. For the 9.2.27 bottom correspond to assembly rate constant values of lo-'', lo-",
lo-", lo-', lo-', lo-', and respectively.
hybridoma cell line, during cultivation of the cells in
a 1-L total cell recycle perfusion bioreactor," specific
antibody secretion rates were found to be essentially
constant around 3 X 106-5 x lo6 molecules/cell . h for -- l E 9
specific growth rates ranging between zero and the
maximum specific growth rate (0.04 h-') (Fig. 3). The
steady-state solution of this model (developed indepen- .-IS8
dently from the recycle reactor experimental data) does
indeed predict that a specific antibody secretion rate
of approximately 4 x 106-5 x lo6 molecules/cell . h
-.lE7
should be independent of growth rate (Fig. 2).

0.00 0.01 0.02 0.03 0.04


Effect of Assembly Rate Constant on lntracellular
Heavy- and Light-Chain Levels Specific growth rate (l/hr)
Figures 4-6 summarize the effect of the assembly rate Figure 5. Effect of the assembly rate constant on the intracellular
steady-state light-chain levels for specific growth rates 0 to pmar
constant on the steady-state intracellular (intraER) (0.04 h-'); t i / z , E R = 42 min and t l / Z , G = 20 min. Curves from top to
levels of free (unassembled) light and heavy chains bottom correspond to assembly rate constant values of lo-", lo-",
and their ratio for specific growth rates between 0 and lo-", lo-*, lo-', and respectively.
0.04 h-'. The results of Figures 4 and 5 suggest that at a
given specific growth rate, the intracellular heavy- and

-2 1 0 A
6E6
light-chain pools decrease as the assembly rate constant
increases. Depending on the assembly rate constant
value, the intracellular heavy-chain levels may decrease,
A
increase, or remain essentially constant with increasing
Ill specific growth rate (Fig. 4). Depending on the assembly
rate constant value, the intracellular light-chain levels
may continuously decrease with increasing specific
growth rate, show an initial rapid increase followed by
decrease at higher growth rates or show an initial rapid
increase followed by slight increases at higher growth
rates (Fig. 5).
W
The model-predicted intracellular ratio of light to
0.00 0.01 0.02 0.03 0.04 0.05 heavy chains is always 21.0 (Fig. 6). The presence of
Specific growth rate (l/hr) intracellular excess light chains has been experimentally
verified in various immunoglobulin secreting cell lines.54
Figure 3. Specific antibody secretion rate vs. specific growth rate At specific growth rate equal to zero, the predicted ratio
during cultivation of 9.2.27 hybridoma cells in a 1-L total cell re-
of intracellular light to heavy chains is equal to 1.0 and
cycle perfusion b i o r e a c t ~ r Symbols
.~~ represent reactor runs at dif-
ferent L-glutamine provision rates (GlnPR) and a dilution rate of is independent of the value of the assembly rate con-
0.05 h-': (0) GlnPR = 0.39 mg/min; (0)GlnPR = 0.74 mg/min; stant. For all values of the assembly rate constant there
(A) GInPR = 0.99 mg/min; (0)GlnPR = 1.44 mg/min. is an initial increase in the light-to-heavy-chain ratio

256 BIOTECHNOLOGY AND BIOENGINEERING, VOL. 39, NO. 3, FEBRUARY 5, 1992


X
3

X
3
-. 0.00 0.01 0.k 0.63 0.04
0.00 0.01 0.k 0.k 0.b
Specific growth rate (l/hr) Specific secretion rate (l/hr)
Figure 6. Effect of the assembly rate constant on the intracellular Figure 7. (a) Effect of the ER to Golgi transport half-time, ~ ~ / z , E R ,
steady-state light-to-heavy-chain ratio for specific growth rates 0 to on the specific antibody secretion rate for specific growth rates 0
pmax (0.04 h-'); t 1 1 2 , ~=~ 42 rnin and t l i z , ~= 20 min. (a) From bot- to pmax (0.04 h-I); tlR,G = 20 min and Ka = lo-'. The value of t1/2,ER
tom to top curves correspond to assembly rate constant values of was varied between 0.5 and 1 h with 0.1 h increments. The ob-
lo-'', lo-", lo-", lo-', and lo-', respectively. (b) From bottom to tained profiles overlap. (b) Effect of the Golgi-to-medium trans-
top curves correspond to assembly rate constant values of 5 x lo-', port half-time, tliz,G,on the specific antibody secretion rate for
5 x 10-7,and respectively. specific growth rates 0 to p,,,,, (0.04 h-I); ~ ~ / z , E =
R 42 rnin and
Ka = The value of t , , 2 , ~was varied between 5 and 20 rnin
with increasing growth rate. This is followed by a con- with 5-min increments. The obtained profiles overlap.
stant ratio with increasing growth rate for the lower as-
sembly rate constant values or a slight decrease of the affect the specific antibody secretion rate, in agreement
ratio with increasing growth rate for the higher assem- with the factorial design analysis predictions.
bly rate constant values. At a constant growth rate, the Figure 8 shows the size of the ER and Golgi MAb
light-to-heavy-chain ratio increases with increasing as- pools as a function of specific growth rate for values of
t112,ER between 30 and 60 min, tliZ,G= 20 min and KA =
sembly rate constant. The dependence of the intracel-
lular light-to-heavy-chain ratio on growth rate has been lop9((molecules/cell) . h)-'. The ER antibody pool
experimentally verified.5*In immunoglobulin secreting increases with increasing specific growth rate for all
myeloma cells this ratio was found to be close to 1.0 in values of tlIZ,ER (Fig. 8a). As expected, at a constant
the stationary growth phase and higher than 1.0 (around specific growth rate the size of the ER antibody pool
2.5) in the exponential growth phase; these experimen- increases as the transport rate constant out of the ER
tal results are in good agreement with our model predic- decreases, i.e., at t I / z , E R increases. The size of the Golgi
tions (Fig. 6). antibody pool remains essentially unchanged with vary-
ing t1/2,ER (Fig. 8b). This is due to the fact that although
the ER-to-Golgi transport rate constant varies, the size
Effect of ER-to-Gobi and Golgi-to-Extracellular- of the ER antibody available for transport is adjusted so
Medium Transport Half-times on Specific M A 6 that their product is essentially constant. According to
Secretion Rate
Equation (12), this would result in a constant Golgi anti-
Figure 7a shows the specific antibody secretion rate as body pool.
a function of specific growth rate for values of ER-to- Figure 9 shows the size of the Golgi antibody pool as
Golgi transport half-time, t i / z , E R , between 30 and 60 min a function of specific growth rate for KA = ((mole-
for an assembly rate constant equal to ((molecules/ cules/cell) . h)-', t l / 2 , E R = 42 min, and tl12,G between 5
cell) . h)-'. Figure 7b shows the specific antibody secre- and 20 min. As expected, at a particular specific growth
tion rate as a function of specific growth rate for values rate, the size of the Golgi antibody pool increases as the
of the Golgi-to-extracellular-medium transport half- transport rate constant out of the Golgi decreases, i.e.,
time, tl,2,G,between 5 and 20 min for the same assembly as t1/2,G increases. The results of Figures 7b and 9 would
rate constant value. The results in Figure 7 suggest that suggest that when tllZ,G changes under steady-state con-
changes in the ER-to-Golgi or Golgi-to-extracellular- ditions, the size of the Golgi antibody pool does change,
medium transport rate constants do not significantly but it is regulated so that the Golgi-to-medium transport

BlBlLA AND FLICKINGER: STEADY-STATE ANALYSIS OF A STRUCTURED MODEL 257


04 I
0.00 0.01 0.02 0.09 0.04 0.00 0.01 0.02 0.09 0.04

Specific growth rate (l/hr) Specific growth rate (l/hr)


Figure 8. Effect of the ER-to-Golgi transport half-time, t 1 / 2 , ~ ~ , Figure 10. (a) Effect of the ER-to-Golgi transport half-time,
on the ER and Golgi antibody pool sizes for specific growth rates 0 f l / z , E R , on the ratio of E R to Golgi antibody pools for specific growth
to pmal(0.04 h-') and an assembly rate constant value equal to rates 0 to pmax (0.04 h-') and f l , 2 , ~= 20 min. The profiles shown are
lo-' (molecule/cell . h); t l , 2 , ~= 20 min. independent of the assembly rate constant value. (b) Effect of the
Golgi-to-medium transport half-time, t l , ~ , on ~ , the ratio of ER to
Golgi antibody pools for specific growth rates 0 to F~~~ (0.04 h-')
and t l , z , ~=~42 min. The profiles shown are independent of the
assembly rate constant value.

functions of the growth rate, the value of the assembly


rate constant and the values of the ER-to-Golgi and
Golgi-to-medium transport half-times (Fig. 8 and 9),
their ratio only depends on the values of the interorgan-
elle transport half-times. In all cases, the predicted size
of the ER antibody pool is larger than the size of the
Golgi antibody pool, in agreement with experimental
0.00 0.01 0.02 0.03 0.04 observation^.'^ Doubling f l/Z ,E R from 30 to 60 min results
Specific growth r a t e ( l / h r ) in doubling of the ER-to-Golgi MAb pool ratio from 1.5
Figure 9. Effect of the Golgi-to-medium transport half-time, f l , 2 , c , to 3 (Fig. 10a),whereas a fourfold decrease of ~ I / Z , Gfrom
on the Golgi antibody pool size for specific growth rates 0 to pmar 20 to 5 min results in a fourfold increase of the ratio
(0.04 h-I); t l n , =
~~42 min and KA = lo-'. from 2 to about 8 (Fig. lob).
rate (secretion rate) remains essentially constant. For
assembly rate constant values that result in a negative Implications for Optimization of Large-Scale
correlation between the specific antibody secretion rate Production Systems
and the specific growth rate, the size of the ER and Having assessed the importance of secretory pathway
Golgi antibody pools decreases with increasing growth parameters in determining the specific antibody secre-
rate, but again changes in I I I Z , E R or ~ ~ I do
z , not
G signifi- tion rate, how could these parameters be manipulated to
cantly affect the specific antibody secretion rate. maximize antibody secretion?
Figure 10 shows the ratio of the ER MAb pool to the
Golgi MAb pool as a function of specific growth rate for
Manipulation of Cell Growth Rate
varying tl12,ER and tliZ,G,respectively. The simulation
profiles shown in Figure 10 are independent of the value The ability of our model to predict the dependence of
of the assembly rate constant. For a given I1/2,ER and antibody secretion rate on cell growth rate may be
tliZ,G value, the predicted value of the ER-to-Golgi anti- important for optimizing bioreactor performance in
body ratio is constant with specific growth rate. The large-scale antibody production systems. A positive cor-
results in Figure 10 suggest that despite the fact that the relation between secretion rate and growth rate would
sizes of the ER and Golgi antibody pools are strong favor the maintenance of the cells at close to maximum

258 BIOTECHNOLOGY AND BIOENGINEERING, VOL. 39, NO. 3, FEBRUARY 5, 1992


growth rate in a batch, fed-batch, or continuous biore- with entrance of cells from the exponential into the
actor operated at a high dilution rate. A negative corre- stationary phase of as well as increase during
lation between secretion rate and growth rate would induction of stress proteins (e.g., heat shock, glucose
favor the maintenance of the cells at close to zero starvation, and glycosylation inhibitor additi~n).~’ Ge-
growth rates in a system such as a perfusion or immobi- netic manipulations that would increase the levels of
lized cell bioreactor (hollow fiber, ceramic matrix). PDI expression may be a useful approach to increasing
However, the ideal growth medium and bioreactor assembly rates and possibly antibody secretion rates in
operation mode combination should not only maximize fast-growing cells (see the companion article).
the specific antibody secretion rate but also maximize According to the steady-state simulation results pre-
cell density in order to achieve maximum volumetric sented here, antibody secretion by slowly growing or
antibody productivity [Equation (xi)]. The volumetric stationary phase hybridoma cells (as is the case in
antibody productivity can be significantly increased by immobilized-type systems) is most likely controlled at
increasing the viable cell concentration via control of the level of heavy- and light-chain translation. Since
growth rate. In a continuous culture the growth rate, translation is a highly energy-intensive process, strate-
cell viability, and final cell concentration can be con- gies to increase specific antibody secretion rates in that
trolled by controlling the dilution rate.” In a perfusion case should most likely focus on the design of appro-
culture with purge, cell viability and growth rate can be priate nutrient feeding schemes. A more detailed dis-
controlled by controlling the purge rate26whereas the cussion on the identity of rate-limiting steps in the
final steady-state cell concentration can be controlled by monoclonal antibody secretory pathway as well as a
controlling the dilution rate.26The achievable final cell demonstration of how our model could be used to de-
concentration in perfusion and immobilized systems can sign genetic manipulation or nutrient feeding strategies
be as much as 10-fold higher than the maximum cell to overcome pathway rate limitations are given in the
concentration at the end of exponential phase in a batch companion article conjunction with the study of the dy-
culture,’ leading to much higher antibody volumetric namic behavior of this pathway.
productivitie~.’~~~However, manipulation of the bioreac-
tor operation mode to maximize cell viability and final
CONCLUSIONS
cell concentration should also take into account the ef-
fect of growth rate on specific antibody secretion rate, We have used our previously developed structured ki-
which according to the model predictions presented netic model of monoclonal antibody synthesis and se-
here can be negligible, positive, or negative. cretion in steady-state simulations to assess the role of
different model parameters in determining the final
specific antibody secretion rate. The assembly rate con-
Genetic Manipulation of M A 6 Secretory Pathway
stant for heavy- and light-chain assembly in the ER, the
Introduction of multiple copies of the heavy- and light- specific growth rate (coupled with the heavy- and light-
chain genes in the cell could substantially increase chain translation rates), and the gene dosage of the
specific antibody secretion rates according to our model heavy and light chains are the parameters with the
predictions. However, the stability of the introduced greatest effect on the secretion rate. Strong interaction
gene copies, their transcription and translation efficien- was observed between the effects of these three parame-
cies, and their effect on cell growth rate may alter the ters as indicated by factorial design analysis. Our model
observed effect on antibody secretion rate from that has the ability to predict a positive, negative, or no cor-
predicted by the steady-state solution of the model pre- relation between the specific antibody secretion rate
sented here. and the specific growth rate. Optimization of the volu-
Assembly of heavy and light chains in the ER was metric antibody productivity in large-scale production
found to be a very likely candidate for a controlling systems should consider maximizing the specific anti-
step in the antibody secretory pathway under fast body secretion rate via growth rate control, appropriate
growth conditions. Assembly is catalyzed by protein nutrient feeding schemes, and/or genetic manipulations
disulfide isomerase (PDI), a multifunctional ER enzyme of the MAb secretory pathway as well as maximizing
which catalyzes formation of native disulfide bonds the viable cell denstiy by choice of an appropriate biore-
in disulfide-bonded proteins.” Changes in the concen- actor operation mode and growth medium.
tration of intracellular PDI levels should result in
proportional changes in the assembly rate constant. In-
APPENDIX: STRUCTURED KINETIC MODEL FOR
tracellular levels of PDI in immunoglobulin secreting MAb SYNTHESIS AND
cells have been reported to correlate well with immuno-
globuiin secretion suggesting that the assembly lntracellular Heavy- and Light-Chain
rate might determine the overall antibody secretion mRNA Balances
rate, a conclusion similar to our model predictions. In-
tracellular PDI levels have also been reported to change
with the growth stage of cells, increasing up 5- to 10-fold

BlBlLA AND FLICKINGER: STEADY-STATE ANALYSIS OF A STRUCTURED MODEL 259


where mH,m,. = intacellular heavy- and light-chain mRNA KG = rate constant for Golgi-to-extracellular-medium
concent rat ions (mRNAs/cell) antibody transport (h-I)
NH, NL = heavy- and light-chain gene copy number tliZ,6= half-time for Golgi-to-extracellular-medium
(genes/cell) antibody transport (h)
S H ,SL = heavy- and light-chain gene specific transcription t112.c= In K KG
rates (mRNAs/gene/h)
KG . [ H z L ~=] q~M A b = specific antibody secretion rate
K = heavy- and light-chain mRNA decay rates (h-I) (molecules/cell/ h)
p = specific growth rate (h-I)
MAb Balance in Extracellular Medium
IntraER Heavy- and Light-Chain Balances d[MAb]/dt = qMAh ' xv
d[H]/dt = TH . mH - p [HI - RH
I
(iii) where [MAb] = antibody concentration in the extracellular
medium (molecules/mL)
d[L]/dt = TL . m L - p . [L]- RL (iv)
where H , L = free heavy- and light-chain concentrations in the Xv = viable cell concentration (viable cells/mL)
E R (chains/cell) The authors acknowledge the partial support of this work by
TH,TL = heavy- and light-chain specific translation rates Lilly Research Laboratories (Indianapolis, Indiana), R&D
Systems, Inc. (Minneapolis, Minnesota), Pfizer Central
(chains/mRNA h)
Research (Groton, Connecticut), and the Institute for Ad-
R H ,R L = rates of heavy- and light-chain consumption in vanced Studies in Biological Process Technology. The au-
assembly (chains/cell/h) thors are grateful to Drs. George Boder and Jon Schmidtke
(Lilly) for use of the 9.2.27 hybridoma cell line.

Heavy- and Light-Chain Assembly in ER: IntraER


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BlBlLA AND FLICKINGER: STEADY-STATE ANALYSIS OF A STRUCTURED MODEL 261

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