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ORIGINAL STUDY

Atypical Spitzoid Neoplasms in Childhood:


A Molecular and Outcome Study
Christina Y. Lee, BA,* Lauren M. Sholl, MS,* Bin Zhang, MS,* Emily A. Merkel, BA,*
Sapna M. Amin, MD,* Joan Guitart, MD,*† and Pedram Gerami, MD*†

For example, through a case-controlled study design, our group


Abstract: The natural history of atypical Spitz neoplasms remains previously identified homozygous deletions in 9p21 as a genetic
poorly understood, resulting in significant patient and clinician signature associated with aggressive behavior in atypical spit-
anxiety. We sought to better characterize outcomes that correlated zoid neoplasms.1 However, case–control studies also have
with molecular features by performing a prospective cohort study of many limitations and are unable to describe the natural history
pediatric atypical spitzoid neoplasms in which fluorescence in situ of these lesions.
hybridization studies were obtained for diagnosis. Cases with In this study, we report the findings in a prospective
sufficient tissue underwent additional retrospective assessment for cohort of pediatric atypical spitzoid neoplasms that have been
translocations in ALK, NTRK1, BRAF, RET, and ROS1. Among 246 assessed by fluorescence in situ hybridization (FISH) for
total patients assessed, 13% had a positive fluorescence in situ diagnostic purposes. We sought to identify the frequency of
hybridization result. Follow-up data was available in 85 patients. a positive FISH result among atypical spitzoid neoplasms in
Two patients had a recurrence of whom 1 had distant metastasis. which there was sufficient concern to request molecular
Both patients had homozygous deletions in 9p21. Homozygous de- assessment and consultative opinion. Additionally, we sought
letions in 9p21 significantly correlated with recurrence of disease to determine the frequency of aggressive tumor behavior in the
(P = 0.027). Fifteen (36%) of 42 cases were found to have a kinase entire cohort with follow-up information, and, in particular,
fusion protein. However, the presence of kinase fusions was non- among cases with a positive FISH result. Finally, in light of the
prognostic of recurrence (P . 0.99). This study was limited by the recent discovery of a number of specific translocations
availability and length of follow-up data and the number of adverse involving ROS1, ALK, NTRK1, BRAF, and RET as the primary
outcomes. The majority of atypical spitzoid neoplasms in childhood driver in Spitzoid neoplasms,2 we retrospectively analyzed our
have indolent behavior. Although the subgroup of patients with cases for these translocations to determine if any are associated
homozygous deletions in 9p21 is at higher risk for aggressive clinical with a positive FISH result or aggressive biological behavior.
behavior, their prognosis seems considerably better than similarly
staged conventional melanoma.
Key Words: spitzoid neoplasm, fluorescence in situ hybridization, MATERIALS AND METHODS
kinase fusion, pediatrics After obtaining approval from the Institutional Review
(Am J Dermatopathol 2017;39:181–186) Board of the Northwestern University, we prospectively
followed all patients aged 18 years or younger with
a diagnosis of an atypical spitzoid neoplasm between 2006
and 2015. Only those with a diagnosis of atypical Spitz
INTRODUCTION nevus, atypical Spitz tumor, or spitzoid melanoma assessed
Despite being the subject of myriad studies in dermatol- by FISH for risk assessment at the time of diagnosis were
ogy and pathology, the natural history of childhood atypical included. FISH analysis and interpretation for a 4-probe assay
spitzoid neoplasms remains poorly understood. This is, in part, targeting 6p25, 11q13, 6p/CEP6, and 6q/CEP6 and/or for
a result of the case–control design used for most studies inves- a 2-probe assay targeting 9p21 and cep9 were used as
tigating atypical spitzoid neoplasms in childhood. These stud- previously described.3,4 Clinical parameters were recorded,
ies are highly valuable and have allowed investigators to better which included age, sex, and anatomical location, along with
characterize atypical spitzoid neoplasms with adverse behavior. histological features, such as mitotic rate and ulceration.
Cases were retrospectively assessed for mitoses by a board
From the *Department of Dermatology, Feinberg School of Medicine, North- certified dermatopathologist (P.G.) if it was not reported at the
western University, Chicago, IL; and †Robert H. Lurie Cancer Center, time of diagnosis. Eighteen patients in the current cohort were
Feinberg School of Medicine, Northwestern University, Chicago, IL.
Supported by the IDP Foundation. previously reported in prior studies,5,6 which have included
P. Gerami has served as a consultant to Castle Biosciences, Inc, and both pediatric and adult patients. The remaining patients in
DermTech, Inc, and has received honoraria for this. The remaining this study have not been included in any prior studies. When
authors declare no conflicts of interest. follow-up was available, cases were classified into 4 groups
Reprints: Pedram Gerami, MD, Department of Dermatology, Northwestern
University, 676 N St. Clair St, Suite 1600, Chicago, IL 60611 (e-mail:
on the basis of their outcome: (1) those with no evidence of
pgerami1@nm.org). disease after re-excision, (2) those with no evidence of disease
Copyright © 2016 Wolters Kluwer Health, Inc. All rights reserved. beyond the sentinel lymph node, (3) those with disease in the

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Lee et al Am J Dermatopathol  Volume 39, Number 3, March 2017

complete lymphadenectomy but no further evidence of dis-


TABLE 1. Clinical, Pathologic, and Molecular Characteristics
ease, and (4) those with recurrence, which included patients
of Spitzoid Neoplasms
with a local recurrence, in transit metastasis, or distant
metastasis. Total (N = 246)
Spitz nevi 15.8% (39)
Immunohistochemistry Spitz tumors 72.0% (177)
For cases with available follow-up and sufficient addi- Spitzoid melanomas 12.2% (30)
tional tissue, immunohistochemical studies were conducted Average age (yr) 9.9
using unstained sections of formalin-fixed, paraffin-embedded Male:female 120:126
material. All immunohistochemistry was performed on the Location of lesion % (n)
Leica BOND-MAX (Leica Biosystems, Buffalo Grove, IL) Head/neck 34.6% (85)
using the Bond Polymer Refine Detection kit. The RET Trunk 22.4% (55)
antibody (1:250, EPR2871; Abcam, Cambridge, MA) used Upper extremities 17.9% (45)
a low pH retrieval. The BRAF (1:100, Clone pBR1; Spring Lower extremities 24.0% (59)
Biosciences, Atlanta, GA), NTRK1 (Anti-TrkA, 1:100, Clone Acral 0
EP 1058Y; Abcam), and ALK (clone M7195; DAKO, Unknown 0.8% (2)
Carpinteria, CA) immunostains used a high pH retrieval. The FISH positive 32 (13.0%)
BRAF immunostain used an additional rabbit anti-rat HRP 6p25 18
(DAKO) link step. The percentage of cells exhibiting staining 11q13 10
was assessed by our dermatopathologist (P.G.). Immunostain- 6p/CEP6 7
ing for ROS1 (1:250, Clone D4D6; Cell Signaling Technol- 9p21 19
ogy, Danvers, MA) was unsuccessful. FISH negative 214 (87.0%)

FISH Analysis for Kinase Fusion


To confirm the presence of a fusion, cases considered gains, 7 for 6p/CEP6, and 19 for 9p21 homozygous deletions.
positive by immunohistochemistry were tested with their Fifteen cases showed alterations in 2 or more of the tested loci.
respective FISH break-apart probe. Cases with progression Single chromosomal aberrations were detected in 17 cases:
beyond the sentinel node and available tissue were also assessed 6p25 in 4 cases, 6p/cep6 in 1 case, and 9p21 in 12 cases.
for a fusion in ALK, NTRK1, BRAF, RET, and ROS1. The ALK, Thirty-two patients were found to have 6q23 deletions. How-
BRAF, and NTRK1 break-apart probes (Empire Genomics, ever, we did not include 6q23 as a positive result if it was the
Buffalo, NY) and the RET and ROS1 centromeric and telomer- only positive FISH finding because we have previously found
ic probes (Abbott Molecular, Des Plaines, IL) were prepared via this group of patients to have a uniformly indolent prognosis.7
their respective manufacturer’s protocol. All slides were exam- Follow-up data were available for 85 patients, with
ined using a Zeiss Imager Z.2 microscope using Metafer soft- a median follow-up of 12 months (range, 3–89 months). Nine
ware (MetaSystems, Newton, MA) for nuclei detection and (10.6%) of these 85 lesions were ulcerated. The median mitotic
image processing. Slides were considered positive for break rate was 2 square millimeter (range, 0–14/mm2). Seventeen
apart if signals were greater than 2 signals away from each (20.0%) of these 85 cases had a positive FISH result (Table
other, if the 50 colored probe was lost, or if there were uneven 1); of which, 9 tumors had homozygous deletions in 9p21.
gains between the 50 and 30 ends of the gene. None of the 68 cases with a negative FISH result and follow-
up data had a recurrence (median follow-up, 10 months).
Statistical Analysis Twenty-three (27.1%) of 85 patients underwent a sen-
Statistical analysis was performed using SPSS software tinel lymph node biopsy (SLNB). Ten patients with a negative
(IBM, Corp, Armonk, NY). Fisher exact test was used to FISH result and 13 patients with a positive FISH result
compare the frequency of recurrence between FISH-positive underwent a SLNB. Twelve (52.2%) patients had a positive
and FISH-negative cases with follow-up data. Logistic SLNB result; of whom, 8 had a positive FISH result.
regression analysis was used to evaluate significance of Overall, there were 4 patients with evidence of tumor
recurrence for variables such as age, sex, mitotic figures, spread beyond the sentinel lymph node (Table 2). Three cases
ulceration, FISH positivity, and fusion positivity. had homozygous deletions in 9p21, whereas 1 case was pos-
itive for 6p/CEP6. Three patients, including 1 who had 3
instances of local recurrence despite wide excision (Fig. 1),
RESULTS were disease free at the time of last follow-up (range, 3–43
Our cohort included 246 cases, 120 (48.7%) males and months). One patient diagnosed with spitzoid melanoma
126 (51.2%) females (Table 1). The median age was 9.9 years developed distant metastasis to the groin, axilla, brain, and
(range, 1–18 years). Thirty-nine (15.8%) lesions were diag- chest (follow-up 24 months). Both patients with either local
nosed as atypical Spitz nevi, 177 (72.0%) as atypical Spitz recurrent (Fig. 2) or metastatic disease had homozygous de-
tumors, and 30 (12.2%) as spitzoid melanomas. Overall, FISH letions in 9p21.
analysis using the conventional melanoma 4-probe and 2-probe Using the Fisher exact test, FISH positivity significantly
set was found to be positive in 32 (13.0%) of 246 cases. correlated with recurrence (P = 0.0381). Furthermore, homo-
Specifically, 18 were positive for 6p25 gains, 10 for 11q13 zygous deletions in 9p21 and recurrence remained significantly

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Am J Dermatopathol  Volume 39, Number 3, March 2017 Molecular and Outcome Study

TABLE 2. Spitzoid Neoplasms With Disease Progression Beyond the Sentinel Node
Age (yr), FISH FU Length,
Case Sex Location Diagnosis FISH Result Translocation mo Overall Outcome
48 6, male Abdomen Spitzoid melanoma 9p21 Negative 24 Positive SLNB; distant metastasis to groin,
axilla, brain, and chest
99 2, female Nose, tip Spitzoid melanoma 6p23, 11q13, Not tested 43 3 times local recurrence following wide
9p21 excision; positive SLNB; 1 positive node
on complete lymphadenectomy; no
evidence of disease
101 8, male Shin Spitzoid melanoma 9p21 NTRK1 39 Positive SLNB; 1 positive node on complete
lymphadenectomy 1 year of interferon
therapy; no evidence of disease
105 2, male Cheek Spitzoid melanoma 6p/CEP6 Negative 3 Positive SLNB; 2 positive nodes on complete
lymphadenectomy; no evidence of disease

correlated (P = 0.0271). Significant correlation was also could not be assessed, 2 cases were negative for the presence
observed between FISH positivity and recurrence through of any translocation, and 1 case had a translocation in
logistic regression analysis (P = 0.010). However, age, sex, NTRK1. This was the only case with a translocation detected
ulceration, mitotic figures, or fusion positivity did not signifi- that also had homozygous deletions in 9p21. This patient
cantly correlate with recurrence. had 1 positive node in the completion lymph node dissection
Additional tissue was available for 42 of 85 cases with but had no evidence of disease recurrence or progression at
follow-up to assess for the presence of a translocation in the time of last follow-up (39 months).
ALK, NTRK1, BRAF, or RET. Six of 85 cases were tested for
ROS1 and were all negative. Kinase fusions involving 1 of
these 5 tyrosine kinases were found in 15 (35.7%) of 42 DISCUSSION
cases in mutually exclusive groups: ALK in 7 cases There are still many unknowns regarding the natural
(16.7%), NTRK1 in 4 cases (9.5%), and BRAF in 4 cases history of atypical spitzoid neoplasms in children. Most series
(9.5%). No cases had a gene rearrangement in RET in our that have assessed this subject are of a case–control nature
series (Table 3). Of these 15 cases with a translocation, copy often enriched with cases with adverse events to compare
number gains were also seen in 6 cases: 3 in ALK, 2 in morphologic or molecular features of aggressive and indolent
BRAF, and 1 in NTRK1. In the subset of cases (n = 4) with cases.5,8 There are few series of well-defined cohorts that
disease progression beyond the sentinel lymph node, 1 case allow for estimates of the true frequency of aggressive

FIGURE 1. Spitzoid melanoma,


Breslow depth at least 6.5 mm, from
a 2-year-old female. A, Low-power
magnification showing a large
compound spitzoid melanocytic
proliferation with ulceration at the
surface and broad extension to the
base of the biopsy. B, Low-power
magnification showing expansile
nodular growth of nests near the
base of the lesion. C, Intermediate-
power magnification of deep ex-
pansile nests showing apoptotic and
mitotically active melanocytes. D,
High-power magnification showing
high-grade nuclear atypia with
coarse nuclear chromatin and
numerous deep mitotic figures.

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Lee et al Am J Dermatopathol  Volume 39, Number 3, March 2017

FIGURE 2. Positive FISH result from


a spitzoid melanoma from a 2-year-
old girl. A, FISH with probe target-
ing 9p21 showing majority of cells
with homozygous deletions in
9p21. B, FISH with probe targeting
CEP9 showing normal to increased
copy numbers of the chromosome 9
centromere. C, FISH with probe
targeting 11q13 showing low level,
occasional gains. D, FISH with probe
targeting 6p25 showing the major-
ity of cells having copy number
gains.

behavior. Although atypical Spitz tumors have comparable patients with more aggressive disease who continue to have
rates of sentinel lymph node positivity to conventional mela- follow-up visits to the hospital with documentation of their
nomas, it is generally appreciated that the frequency of distant health status. Alternatively, patients with low-grade lesions or
metastasis or death in these cases is more rare than in con- a negative FISH result are more likely lost to follow up,
ventional melanomas.9–11 Still, clinicians and parents often presumably due to having a more benign clinical course.
desire more concrete numbers to better understand the risk Hence, we estimate that although 1 (1.2%) of 85 patients in
level of the patient or their child. our cohort with follow-up had distant metastasis, the true rate,
In our study, we identified 2 (2.4%) of 85 patients who even among the cases that are morphologically quite atypical,
had recurrence of their disease; of whom, 1 (1.2%) developed is likely well below 1%. Among the 17 patients with follow-
distant metastasis. This percentage of distant metastasis is up information and a positive FISH result, 4 had tumor spread
similar to other cohort studies of atypical spitzoid neoplasms. beyond the sentinel lymph node, which included 1 patient
In separate studies, Ludgate et al9 and Sepehr et al12 each who had a 3-time recurrence of the lesion and 1 patient who
identified 1 (1.5%) of 67 patients and 1 (0.007%) of 144 developed distant metastasis. Nine of 17 FISH-positive
patients, respectively, who developed distant metastasis. tumors had homozygous deletions in 9p21, including both
However, even these studies are subject to overestimate the patients with local recurrence and distant metastasis. Based on
true rate of aggressive behavior for several reasons. these figures, we estimate that less than 25% of children with
Our cohort is partially defined by patients in whom the atypical spitzoid neoplasms with homozygous deletions in
tumor was concerning enough to be sent to a tertiary referral 9p21 will experience a recurrence after complete excision and
center for molecular assessment and consultative opinion. less than 12.5% will develop distant metastasis. For the same
Therefore, most of our cases have been assessed as morpho- reasons mentioned previously, these numbers are likely over-
logically highly atypical by at least 1 pathologist. Further- estimates, as follow-up information is more consistently avail-
more, follow-up data are generally more attainable from able for high-risk patients who return for subsequent visits.

TABLE 3. Frequency of Kinase Fusions in Spitzoid Neoplasms


Spitz Nevus (n = 2) % Atypical Spitz Tumor (n = 34) % Spitzoid Melanoma (n = 6) % Total (n = 42) %
Fusion (No. Cases) (No. Cases) (No. Cases) (No. Cases)
ALK 0 20.6% (7) 0 16.7% (7)
NTRK1 50% (1) 5.9% (2) 16.7% (1) 9.5% (4)
BRAF 0 11.8% (4) 0 9.5% (4)
RET 0 0 0 0
Total 50% (1) 30.9% (13) 16.7% (1) 35.7% (15)

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Am J Dermatopathol  Volume 39, Number 3, March 2017 Molecular and Outcome Study

Among the cases with follow-up in our study, sufficient Limitations of our study include the length of follow-up
material was available to retrospectively perform immuno- and the number of patients who were lost to follow-up. We
histochemistry and FISH studies for 42 cases to assess for the suspect that patients lost to follow-up most likely consist of
presence of a translocation in ALK, NTRK1, BRAF, or RET. a group of patients with uneventful outcomes and that the
Similar to previous reports,2,13 we found kinase fusions in incidence of adverse events is even lower than our current
35.7% of tested cases (Table 3). The most common among estimation. Although the median follow-up time is limited, 22
these were ALK fusions (n = 7), followed by NTRK1 (n = 4) patients were followed for at least 3 years after the initial
and BRAF (n = 4). None of these cases resulted in an adverse diagnosis. Although additional events are possible with
event or metastasis. Similar to the study performed by Wies- longer follow-up, even in the given time frame, we were
ner et al,2 we found fusions present in Spitz nevi (n = 1), Spitz able to establish a statistically significant increase in risk of
tumors (n = 13), and Spitzoid melanomas (n = 1). Only 1 case recurrence of disease associated with homozygous deletions
in our study with a positive FISH result also had an NTRK1 in 9p21. Furthermore, considering the overall limited amount
fusion. This case was among the 4 cases with tumor deposits of information and experience available in the current
found in the complete lymphadenectomy but had no evidence literature regarding the behavior of atypical spitzoid neo-
of recurrence with 39 months of follow-up. Hence, in our plasms, we believe this study adds additional valuable
cohort, the presence of one of the aforementioned fusions information.
did not result in any increased incidence of aggressive dis- Although the subgroup of tumors with homozygous
ease. Importantly, among cases with fusions, 6 cases also had deletions in 9p21 constitutes a high-risk group, the majority
copy number gains involving the chromosome locus of the of these patients will likely do well with adequate surgical
tyrosine kinase (Figs. 3, 4). This is further evidence that the therapy. Hence, the prognosis of pediatric atypical spitzoid
spectrum of copy number aberrations seen in atypical Spitz neoplasms, including those labeled as spitzoid melanoma,
tumors with indolent behavior is greater than previously sus- will likely have a better prognosis than similarly staged
pected. These results are similar to those from Lee et al,13 in conventional melanoma.8,10,13 This further supports the sug-
which only 1 of 23 spitzoid neoplasms with a fusion had an gestion to designate spitzoid melanomas of childhood as
adverse event. The fusions in these cases seem to be the a separate entity from conventional melanomas. Although
initiating driver events that can lead to either stable nevi or, different data series have shown that atypical spitzoid neo-
infrequently, malignancy through the acquisition of additional plasms in childhood with homozygous deletions in 9p21 are
mutations or aberrations. Lee et al13 also found that TERT at higher risk for aggressive tumor behavior than other spit-
promoter mutations strongly correlated with adverse behavior zoid neoplasms of childhood,6 the precise incidence of
in spitzoid neoplasms. However, there is currently an insuf- adverse events among these children still requires further
ficient amount of published data to determine if any of the study. Hence, debate remains as to whether they should be
particular fusions carry a higher risk of progression or acqui- called “spitzoid melanoma” or “high-risk atypical Spitz tumor
sition of these additional genomic aberrations. of childhood with homozygous deletions in 9p21.” On a case-

FIGURE 3. ALK-positive atypical


Spitz tumor from a 7-year-old boy. A
and B, Low-power magnification of
a large compound spitzoid melano-
cytic proliferation with plexiform
arrangement of superficial nests and
dumbbell-shaped base. C, Interme-
diate-power magnification of ex-
pansile nodular growth of the
dumbbell area near the base of the
biopsy specimen. D, High-power
magnification of an expansile nest of
intermediate-sized spitzoid melano-
cytic cells with moderate atypia and
occasional mitotic activity at the
base of the biopsy specimen.

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Lee et al Am J Dermatopathol  Volume 39, Number 3, March 2017

FIGURE 4. Immunohistochemistry
and FISH break-apart probe con-
firming an ALK translocation in an
atypical Spitz tumor from a 7-year-
old boy. A, strong and diffuse
positive immunostaining for ALK
throughout the tumor. B, FISH using
ALK dual-colored break-apart re-
arrangement probe targeting the
kinase domain in yellow and the 50
end of the gene in green. Numerous
copy number increases of the kinase
domain are noted without associated
50 end of the gene, showing a break
apart with copy number gains.

by-case basis, assessment of the morphologic features in con- clinical outcomes, histomorphology, BRAF mutation, and p16 expres-
junction with molecular findings should be considered in sion. Am J Surg Pathol. 2014;38:638–645.
7. Shen L, Cooper C, Bajaj S, et al. Atypical spitz tumors with 6q23
making this decision. deletions: a clinical, histological, and molecular study. Am J Dermato-
pathol. 2013;35:804–812.
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