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CONTENTS Volume 332 Issue 6025
COVER DEPARTMENTS
Adult sockeye salmon (weight ~2.5 kg; length ~60 cm) migrating 10 This Week in Science
to spawning grounds in the Adams River, British Columbia, Canada. 14 Editors’ Choice
Sockeye salmon populations in the Fraser River, British Columbia, 16 Science Staff
are physiologically adapted to their specific upriver migration 116 New Products
conditions. In a Report on page 109, Eliason et al. suggest that 117 Science Careers
cardiac adaptations help protect one salmon population from
cardiac collapse at high temperatures.
Photo: Robert Polo; robpolo.photography@gmail.com
page 88
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CONTENTS
SCIENCEONLINE
SCIENCEXPRESS SCIENCESIGNALING SCIENCETRANSLATIONAL MEDICINE
www.sciencexpress.org www.sciencesignaling.org www.sciencetranslationalmedicine.org
Saturn’s Curiously Corrugated C Ring The Signal Transduction Knowledge Environment Integrating Medicine and Science
M. M. Hedman et al. 29 March issue: http://scim.ag/ss29Mar2011 30 March issue: http://scim.ag/stm033011
10.1126/science.1202238 EDITORIAL GUIDE: Focus Issue—Rendering COMMENTARY: The Precompetitive Space—
The Impact of Comet Shoemaker-Levy 9 Resistance Futile Time to Move the Yardsticks
Sends Ripples Through the Rings of Jupiter E. M. Adler and N. R. Gough T. Norman et al.
M. R. Showalter et al. Understanding the pathways that mediate drug A recent meeting of minds set into motion an
Spacecraft observations show that Saturn’s resistance is key to developing new cancer therapies. open-access initiative designed to achieve proof
and Jupiter’s rings preserve records of recent of clinical mechanism for selected disease targets.
RESEARCH ARTICLE: Amplification of the Driving
interplanetary debris collisions. Oncogene, KRAS or BRAF, Underpins Acquired PERSPECTIVE: Human Pluripotent Stem Cells—
10.1126/science.1202241 Resistance to MEK1/2 Inhibitors in Colorectal Decoding the Naïve State
Topological Phase Transition and Texture Cancer Cells W. Li and S. Ding
A. S. Little et al. Human stem cells exist in functionally distinct states
Inversion in a Tunable Topological Insulator
that must be deciphered before these versatile
S.-Y. Xu et al. PERSPECTIVE: Resistance to MEK Inhibitors— reagents can be used to transform medicine.
Two types of bulk insulator are realized in the same Should We Co-Target Upstream?
family of compounds through chemical doping. P. I. Poulikakos and D. B. Solit
RESEARCH ARTICLE: A MEK Inhibitor Abrogates
10.1126/science.1201607 Amplification of an upstream kinase in a three-kinase Myeloproliferative Disease in Kras Mutant Mice
module confers resistance to cancer drugs that target N. Lyubynska et al.
Protein Tyrosine Kinase Wee1B Is Essential
a downstream kinase. Inhibiting the Raf/MEK/ERK pathway reverses the
for Metaphase II Exit in Mouse Oocytes harmful effects of oncogenic Kras on hematopoietic
J. S. Oh et al. RESEARCH ARTICLE: c-MYC Suppresses BIN1 differentiation, suggesting a strategy for treating
Cyclin degradation is not the only mechanism that to Release Poly(ADP–ribose) Polymerase 1— myeloproliferative neoplasms.
controls the exit of mouse oocytes from meiosis. A Mechanism by Which Cancer Cells Acquire
10.1126/science.1199211 RESEARCH ARTICLE: Use of Mutant-Specific Ion
Cisplatin Resistance Channel Characteristics for Risk Stratification
Proteoglycan-Specific Molecular Switch S. Pyndiah et al.
of Long QT Syndrome Patients
for RPTPσ Clustering and Neuronal Extension PERSPECTIVE: MYC, PARP1, and C. Jons et al.
C. H. Coles et al. Chemoresistance—BIN There, Done That? Mutations that slow the opening of potassium channels
One receptor binds two different types S. Ganesan in the heart can predict risk for long QT syndrome, a
of proteoglycan at the same site but with c-MYC promotes cisplatin resistance by enabling heart arrhythmia that can cause sudden death.
divergent outcomes. the increased activity of a DNA repair enzyme.
10.1126/science.1200840
RESEARCH ARTICLE: Global Phosphoproteomics SCIENCEPODCAST
Reveals Crosstalk Between Bcr-Abl and Negative www.sciencemag.org/multimedia/podcast
SCIENCENOW
Feedback Mechanisms Controlling Src Signaling Free Weekly Show
www.sciencenow.org On the 1 April Science Podcast: semiconductor
L. Rubbi et al.
Highlights From Our Daily News Coverage nanocrystals, nonhuman rights, your Letters to
PODCAST Science, and more.
Damping Down Fear With Cortisol
T. G. Graeber and A. M. VanHook
The stress hormone enhances therapy
Negative feedback fails to limit Src family kinase
to treat a phobia of heights.
activity in the presence of Bcr-Abl, an oncoprotein
SCIENCEINSIDER
http://scim.ag/less-fear news.sciencemag.org/scienceinsider
that drives leukemia.
Sensing Organ Rejection Science Policy News and Analysis
A new DNA test aims to detect when the body SCIENCECAREERS
rejects a transplanted organ. www.sciencecareers.org/career_magazine
http://scim.ag/organ-test
Free Career Resources for Scientists
Spinning the Sun’s Rays Into Fuel SCIENCE (ISSN 0036-8075) is published weekly on Friday, except the last
Experimental Error: Achieving Immortality
Artificial leaf makes fuel production possible week in December, by the American Association for the Advancement of
A. Ruben Science, 1200 New York Avenue, NW, Washington, DC 20005. Periodicals Mail
wherever there’s water. postage (publication No. 484460) paid at Washington, DC, and additional mailing
How can we ensure that future students will read our
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names when, many years from now, they open their Science. The title SCIENCE is a registered trademark of the AAAS. Domestic individual
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10 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
This Week in Science
INTRODUCING
stress-induced dephosphorylation of a subunit of translation initiation factor 2, thereby prolonging
translation attenuation in stressed cells. This favored protein folding, promoting resistance to protein
AAAS
misfolding in the endoplasmic reticulum. MemberCentral
Molecular Motor
In most eukaryotes, spatial reorganization of the microtubule cytoskeleton during cell division de-
pends crucially on microtubule cross-linking motors of the kinesin-5 family. Roostalu et al. (p. 94,
published online 24 February) combined in vitro and in vivo experiments to examine Cin8, a mitotic
kinesin-5 from budding yeast. Single fluorescent molecule imaging and microtubule-sliding assays
on chemically functionalized surfaces, as well as in vivo imaging revealed that Cin8 is a bidirectional
motor, unlike any other kinesins. Surprisingly, the “default directionality” of this motor was opposite
to that of other kinesin-5 proteins. However, the motor was able to switch directionality, depending
on whether it was working alone on individual microtubules or as a member of a team between an-
tiparallel microtubules, like those found in the mitotic spindle. Cin8 may thus regulate directionality
by sensing the motor-microtubule configuration.
Nanoparticle Doping
The deliberate introduction of impurities into semicon-
ducting materials is used to control their electrical prop-
erties and forms the basis of modern electronics. When The exclusive new
considering nanometer-sized particles, the addition of website for the AAAS
only a few defect atoms can make the particle highly member community.
doped. However, forcing the foreign atoms into the
nanoparticle is a challenge. Mocatta et al. (p. 77; see
the Perspective by Cao) developed a method to add Cu,
Ag, or Au impurities into InAs nanocrystals, which will be important in the fabrication of highly ef-
ficient, quantum dot–based electronic devices such as photovoltaic cells and light-emitting diodes.
spawn in coastal tributaries have much easier journeys than those who traverse up-river for many
weeks. Eliason et al. (p. 109) examined eight salmon populations that experienced a variety of
migration conditions within the Fraser River in British Columbia, Canada. The fish with the most
challenging journeys possessed the largest hearts and the best-developed cardiorespiratory system.
Thus, local selective regimes have driven physiological adaptation to differing migratory conditions. MemberCentral.aaas.org
knowledge, and communicate it accurately and objectively. For years, I have invited journal-
ists to my laboratory to learn about field work and chemical analysis. We have defined terms,
traded metaphors, and explained the perils and protocols of scholarly publishing and publish-
ing for the public. Both parties have benefited. Journalists have come away with a greater
appreciation of the research world and an increased ability to responsibly report to the public,
and I have a better idea of the questions people want answers to.
How can scientists start to engage the media? Universities and colleges have press offices,
but most scientists only interact with them when they have a high-profile manuscript or an
inquiry from the press. However, the press office can be an invaluable conduit for explaining
research to the media. In addition, scientists can reach out to general reporters and invite them
into a conversation about the challenges that both parties face on a daily basis. Scientists also
can encourage their institutional leaders to invest, even modestly, in outreach to the journal-
ism community in the form of briefings, Web sites, and workshops. Fellowship programs such
as those at the Woods Hole Oceanographic Institution, Marine Biological Laboratory, and the
University of Rhode Island get journalists into laboratories and in the field alongside scientists
for a week or more, experiences that are well worth the investment.
Communicating is risky, but not doing so is riskier. If scientists and journalists don’t
try harder and make continual efforts to learn each other’s languages and gain confidence,
knowledge will remain locked in laboratories, misunderstood, unused, or even worse, mis-
used. When this happens, those who thirst for information are shortchanged, and the work
of scientists becomes more of an interesting hobby than a critical endeavor of fundamental
value to society. – Christopher Reddy
10.1126/science.1205172
MICROBIOLOGY
TB Tolerance Exposed
One of the reasons tuberculosis (TB) continues to be a substan- ment of drug tolerance. Multidrug-tolerant bacteria were pres-
tial public health problem is because the bacteria that cause TB, ent in macrophages just days after infection and were expanded
Mycobacterium tuberculosis, develop drug tolerance quickly. and disseminated by granulomas. Bacteria acquired tolerance by
This requires patients to follow a 6-month-long drug regimen replicating in macrophages, in both fish and mammalian cells.
to ensure bacterial eradication, to which many patients fail to Upon infection, macrophages increased expression of bacterial
adhere. In order to identify new drug targets that may lead to efflux pumps, which can pump drugs out. Use of pump inhibitors
shorter therapeutic regimens, Adams et al. dissected the devel- demonstrated that these complexes mediated drug tolerance. To-
opment of drug tolerance in a zebrafish model of TB. Zebrafish gether, these studies suggest that adding efflux pump inhibitors
infection with Mycobacterium marinum followed a similar disease to the standard TB therapies may be an effective way to reduce
course as human infection, which included the rapid develop- the course of treatment. — KLM
Cell 145, 1 (2011).
BIOCHEMISTRY helicases loaded onto DNA could then move however. In order to learn more about these
apart, leaving the extruded DNA between them positions, Bush et al. surveyed SFES and non-
How to Unwind
accessible for replication. — VV SFES faculty members within the California State
During DNA replication, ring-shaped helicases Nat. Struct. Mol. Biol. 18, 10.1038/ University System (CSU). Despite SFES existing
use energy from ATP hydrolysis to move along nsmb.2004 (2011). across all science disciplines, faculty ranks, and
and separate DNA strands, creating space for CSU campuses, their role is still not well defined.
new bases to be added to the emerging template. E D U C AT I O N SFES reported teaching the same amount as
Initiation of replication in eukaryotes involves their non-SFES peers, and the same propor-
two key steps. First, the double hexamer Mcm2-
Sizing Up Education Specialists tion of SFES reported being engaged in science
CREDITS (TOP TO BOTTOM): ADAPTED FROM ADAMS ET AL., CELL 145, 1 (2011); ISTOCKPHOTOS.COM
7 helicase is loaded onto duplex DNA. Second, Attempts to include education training into education research as reported being engaged
Cdc45 and GINS associate with each hexamer already demanding science faculty schedules in basic science research. Although SFES had
to form the active CMG helicase. To gain insight have been challenging. One solution is the formal education training, the amount of actual
into these two steps, Costa et al. determined the introduction of Science Faculty with Educa- training reported was minimal, which suggested
structures of Mcm2-7 and the full CMG helicase tion Specialties (SFES), scientists who take on that science departments still prefer to hire sci-
by single-particle electron microscopy. Structural education roles, into science departments. entists trained in basic research. The majority of
models of Mcm2-7 showed a ring that was open This may increase support for faculty develop- SFES thought that they are making a difference;
between Mcm2 and Mcm5 and could either be ment and innovation in teaching and increase however, almost 40% were considering leaving
planar or form a slight spiral. The full helicase departmental interest in research on teaching their positions because of concerns that their
was constrained to the planar conformation, and learning. Minimal data are available on work in education was not supported, valued, or
and GINS and Cdc45 bridged the gap to form a the purpose, structure, and outcomes of SFES, understood. — MM
large channel. Imaging of CMG purified in the CBE Life Sci. Educ. 10, 25 (2011).
presence of an ATP analog revealed a conforma-
tional change induced by nucleotide binding; CELL BIOLOGY
the gap between Mcm2 and Mcm5 closed and
the channel was divided into two smaller pores.
A Less Toxic Treatment
The tendency of Mcm2-7 to form open rings Cells frequently tag proteins that are targeted for
might facilitate loading onto duplex DNA. Upon destruction by the proteasome with ubiquitin, a
binding of Cdc45 and GINS, the structural process that is important for maintaining cellular
data are consistent with a model in which CMG homeostasis and health. Besides defunct or aber-
promotes duplex opening and accommodates rant cytosolic proteins, misfolded endoplasmic
a single strand in each of its pores. The two reticulum–derived proteins are “dislocated” back
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14 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
EDITORS’CHOICE
into the cytosol, ubiquitinated, and degraded greatly affected the hydrology of streams and
by the proteasome. Proteasome inhibitors that rivers. However, Native Americans had been
block various stages of these processes exist and practicing agriculture and forest management
are useful for studying this biological process, for several centuries before that. Stinchcomb
but are often quite toxic. Ernst et al. describe an et al. show that river hydrology was modified
alternative approach to interfere with the ubiq- by, and so records, this history as well. They
uitin proteasome (UPS) pathway. A highly active focused on the Delaware River Valley, where
ubiquitin-specific protease domain was used to artifacts show widespread settlement from
remove ubiquitin preemptively from substrates about 1100 to 1600 CE, including expansion of
about to be destroyed, and so stabilize them. The maize agriculture and forest clearing. Carbon
technique allowed the uncoupling of dislocation isotope, radiocarbon dating, and phytolith
and degradation of endoplasmic reticulum–de- analyses document the increase in maize and
rived misfolded proteins. This approach efficiently other grasses. Analysis of sediments shows
and globally blocked the UPS pathway, but was increased sedimentation during this interval in
less cytotoxic than commonly used pharmacologi- stream valleys and also an increase in flooding.
cal inhibitors. — SMH Together, the data imply that perhaps half of
PLOS Biol. 8, e1000605 (2011). the surrounding forests were cleared in the lo-
cal floodplain. Flooding may have been further
NEUROSCIENCE augmented by cooler and wetter conditions
from 1450 to 1530 CE. Thus, pre-Columbian
Obesity’s Chicken or Egg agriculture and deforestation also left a
Altered reward circuitry in the brain may play marked sedimentary record, at least locally in
a role in obesity. One change that has been North America. — BH
observed is that overweight people have fewer Geology 39, 363 (2011).
dopamine D2 receptors in the brain striatum;
however, it is unclear whether this is a cause PHYSICS
or consequence of overeating. Stice et al. used
functional magnetic resonance imaging to look
Complex Quantum Simulation
at vulnerability to obesity by examining neural Interactions between the charge, spin, and
responses to food and related cues in high-risk orbital degrees of freedom of electrons in
though still-lean adolescents. They found that a condensed-matter systems can give rise to
corticostriatal network responded to food receipt, many complex electronic and magnetic phases.
but not to anticipation of food-related cues, more The narrow, or often fixed, range of vari-
strongly in these high-risk able materials parameters can
people. A related network be a limitation in probing and
in high-risk individuals understanding the evolution of
also responded more to the order parameters of such
the receipt of money. complex correlated systems. An
These people also showed array of atoms trapped in an
greater activation of optical lattice has the potential to
the oral regions of the be extremely flexible in terms of
somatosensory cortex in tuning the parameters. Although
response to palatable food the atoms tend to be isotropic,
intake, a result specific for leading to somewhat trivial
food rather than money. systems, much theoretical work
Thus, youths at risk for obesity initially had a has explored the possibilities of finding ways to
generally elevated reward region responsivity. imprint and detect more complicated order pa-
When coupled with an increased responsivity of rameters on the lattice of trapped atoms. It is
oral somatosensory regions, this may result in along such lines that Kitagawa et al. propose a
CREDIT: STICE ET AL., J. NEUROSCI. 31, 4360 (2011)
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Takuzo Aida, Univ. of Tokyo Dennis Discher, Univ. of Pennsylvania David Lazer, Harvard Univ. Joseph Silk, Univ. of Oxford
Sonia Altizer, Univ. of Georgia Scott C. Doney, Woods Hole Oceanographic Inst. Virginia Lee, Univ. of Pennsylvania Davor Solter, Inst. of Medical Biology, Singapore
Richard Amasino, Univ. of Wisconsin, Madison Jennifer A. Doudna, Univ. of California, Berkeley Ottoline Leyser, Univ. of New York John Speakman, Univ. of Aberdeen
Sebastian Amigorena, Institut Curie Julian Downward, Cancer Research UK Olle Lindvall, Univ. Hospital, Lund Allan C. Spradling, Carnegie Institution of Washington
Angelika Amon, MIT Bruce Dunn, Univ. of California, Los Angeles Marcia C. Linn, Univ. of California, Berkeley Jonathan Sprent, Garvan Inst. of Medical Research
Kathryn Anderson, Memorial Sloan-Kettering Cancer Center Christopher Dye, WHO John Lis, Cornell Univ. Elsbeth Stern, ETH Zürich
Siv G. E. Andersson, Uppsala Univ. Michael B. Elowitz, Calif. Inst. of Technology Richard Losick, Harvard Univ. Ira Tabas, Columbia Univ.
Peter Andolfatto, Princeton Univ. Tim Elston, Univ. of North Carolina at Chapel Hill Jonathan Losos, Harvard Univ. Yoshiko Takahashi, Nara Inst. of Science and Technology
Meinrat O. Andreae, Max Planck Inst., Mainz Gerhard Ertl, Fritz-Haber-Institut, Berlin Ke Lu, Chinese Acad. of Sciences John Thomas, Duke Univ.
John A. Bargh, Yale Univ. Barry Everitt, Univ. of Cambridge Laura Machesky, CRUK Beatson Inst. for Cancer Research Jurg Tschopp, Univ. of Lausanne
Ben Barres, Stanford Medical School Paul G. Falkowski, Rutgers Univ. Andrew P. MacKenzie, Univ. of St Andrews Herbert Virgin, Washington Univ.
Marisa Bartolomei, Univ. of Penn. School of Med. Ernst Fehr, Univ. of Zurich Anne Magurran, Univ. of St Andrews Bert Vogelstein, Johns Hopkins Univ.
Jordi Bascompte, Estación Biológica de Doñana, CSIC Tom Fenchel, Univ. of Copenhagen Oscar Marin, CSIC & Univ. Miguel Hernández Cynthia Volkert, Univ. of Gottingen
Facundo Batista, London Research Inst. Alain Fischer, INSERM Charles Marshall, Univ. of California, Berkeley Bruce D. Walker, Harvard Medical School
Ray H. Baughman, Univ. of Texas, Dallas Wulfram Gerstner, EPFL Lausanne Martin M. Matzuk, Baylor College of Medicine Ian Walmsley, Univ. of Oxford
David Baum, Univ. of Wisconsin Karl-Heinz Glassmeier, Inst. for Geophysics & Grahma Medley, Univ. of Warwick Christopher A. Walsh, Harvard Medical School
Yasmine Belkaid, NIAID, NIH Extraterrestrial Physics Yasushi Miyashita, Univ. of Tokyo David A. Wardle, Swedish Univ. of Agric Sciences
Stephen J. Benkovic, Penn State Univ. Diane Griffin, Johns Hopkins Bloomberg School of Richard Morris, Univ. of Edinburgh Detlef Weigel, Max Planck Inst., Tübingen
Gregory C. Beroza, Stanford Univ. Public Health Edvard Moser, Norwegian Univ. of Science and Technology Jonathan Weissman, Univ. of California, San Francisco
Ton Bisseling, Wageningen Univ. Taekjip Ha, Univ. of Illinois at Urbana-Champaign Sean Munro, MRC Lab. of Molecular Biology Sue Wessler, Univ. of California, Riverside
Peer Bork, EMBL Christian Haass, Ludwig Maximilians Univ. Naoto Nagaosa, Univ. of Tokyo Ian A. Wilson, The Scripps Res. Inst.
Bernard Bourdon, Ecole Normale Superieure de Lyon Steven Hahn, Fred Hutchinson Cancer Research Center James Nelson, Stanford Univ. School of Med. Timothy D. Wilson, Univ. of Virginia
Ian Boyd, Univ. of St. Andrews Gregory J. Hannon, Cold Spring Harbor Lab. Timothy W. Nilsen, Case Western Reserve Univ. Jan Zaanen, Leiden Univ.
Robert W. Boyd, Univ. of Rochester Dennis L. Hartmann, Univ. of Washington Pär Nordlund, Karolinska Inst. Mayana Zatz, University of Sao Paolo
Paul M. Brakefield, Univ. of Cambridge Martin Heimann, Max Planck Inst., Jena Helga Nowotny, European Research Advisory Board Jonathan Zehr, Ocean Sciences
Christian Büchel, Universitätsklinikum Hamburg-Eppendorf James A. Hendler, Rensselaer Polytechnic Inst. Stuart H. Orkin, Dana-Farber Cancer Inst. Huda Zoghbi, Baylor College of Medicine
Joseph A. Burns, Cornell Univ. Janet G. Hering, Swiss Fed. Inst. of Aquatic Christine Ortiz, MIT Maria Zuber, MIT
William P. Butz, Population Reference Bureau Science & Technology Elinor Ostrom, Indiana Univ.
Gyorgy Buzsaki, Rutgers Univ. Ray Hilborn, Univ. of Washington Andrew Oswald, Univ. of Warwick
Mats Carlsson, Univ. of Oslo Michael E. Himmel, National Renewable Energy Lab. Jonathan T. Overpeck, Univ. of Arizona BOOK REVIEW BOARD
Mildred Cho, Stanford Univ. Kei Hirose, Tokyo Inst. of Technology P. David Pearson, Univ. of California, Berkeley John Aldrich, Duke Univ.
David Clapham, Children’s Hospital, Boston Ove Hoegh-Guldberg, Univ. of Queensland Reginald M. Penner, Univ. of California, Irvine David Bloom, Harvard Univ.
David Clary, Univ. of Oxford David Holden, Imperial College John H. J. Petrini, Memorial Sloan-Kettering Cancer Center Angela Creager, Princeton Univ.
J. M. Claverie, CNRS, Marseille Lora Hooper, UT Southwestern Medical Ctr at Dallas Simon Phillpot, Univ. of Florida Richard Shweder, Univ. of Chicago
Jonathan D. Cohen, Princeton Univ. Jeffrey A. Hubbell, EPFL Lausanne Philippe Poulin, CNRS Ed Wasserman, DuPont
Andrew Cossins, Univ. of Liverpool Steven Jacobsen, Univ. of California, Los Angeles Colin Renfrew, Univ. of Cambridge Lewis Wolpert, Univ. College London
Alan Cowman, Walter & Eliza Hall Inst. Kai Johnsson, Ecole Polytechnique Federale de Lausanne Trevor Robbins, Univ. of Cambridge
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NEWS OF THE WEEK
add up. India today accounts for almost cans, was left out: “We didn’t want any-
60% of the world’s wild tigers. A 2006 sur-
Once Again Into the Depths one to be conflicted about voting for or
vey estimated that the country housed 1165 In a determined effort to retrieve the flight against our national symbol,” the lab’s
to 1657 tigers. The latest survey counts recorders from a doomed 2009 flight, ocean- Web site says.
1571 to 1875 tigers, including 100 tigers ographers working with French authorities
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NEWS
Brussels 6 THEY SAID IT
Europe Nudges Top Scientists “Now I know why they went
to Market extinct! Nature abhors a
Some of Europe’s top scientists will get vacuum.”
financial help to take their discoveries to the
marketplace. The European Research Coun- —Kirt, one of our online readers, who
cil (ERC), the European Union’s funding commented on a story about plant-eating
program for frontier research, will offer sci- sauropod dinosaurs and their improbably
Mount Paektu’s caldera. entists it already funds the chance to apply long necks. To find out “How a Dinosaur Is
for €150,000 “Proof of Concept” grants. Like a Vacuum Cleaner,” see p. 21.
Researchers can use the funds to clarify
erupt, and since 2005 it has been largely intellectual property questions, do market
quiet (Science, 30 July 2010, p. 498). research, and team up with venture capital- is there, someone [from industry] will pick
A few days after the Tohoku earthquake ists, according to a 25 March announcement. up on it.”
struck Japan on 11 March, North Korea’s The idea grew out of the ERC Scientific Peter Tindemans, a Dutch physicist and
earthquake bureau floated the idea of a Council’s efforts to build better relations E.U. science policy expert, welcomed the
North-South project on Mount Paektu’s with industry, says ERC President and new grants. “The combination of the ERC
hazards. As a result, at a highly symbolic Scientific Council Chair Helga Nowotny. focusing on very high scientific originality
29 March meeting at the border village of Although ERC grants are open to company and quality—and stimulating people to think
Munsan, three scientists with North Korea’s scientists, “We have very, very few apply,” about what it might mean for society? I think
Institute of Paektu-san Volcano and four she says. “Hopefully, where the potential it’s a very good development,” he says.
South Korean counterparts agreed to begin
work on a joint research agenda.
NEWSMAKERS For Milnor, the it seems impossibly hard, but then you just
prize caps a long put together an idea here and an idea there,
and distinguished and somehow the answer just drops out.”
career. In 1956, http://scim.ag/abel-prize
he produced what
others immedi-
ately recognized as
Bug Expert Snags Enviro Prize
a masterpiece for For more than 35 years, May Berenbaum
the ages: a seven- has been a champion of insects, studying
dimensional sphere how they interact with plants and humans
too badly twisted to be unscrambled with- and conveying her fascination with bugs to
out creating corners and folds. By the rules the general public. For this work, the Uni-
of topology, two spaces are considered versity of Illinois, Urbana-Champaign, ento-
equivalent if one can be bent, stretched, mologist will receive the 2011 Tyler Prize
and perhaps folded until it looks like the for Environmental Achievement.
Trailblazer of other. Creases are not allowed. Before Mil- Berenbaum helped elucidate the molec-
nor, no one knew that this restriction made ular arms race between plants trying to
Chemical Ecology Dies any difference; for spaces of three dimen- fend off herbivores and insects that evolve
Thomas Eisner, an ecologist and evolution- sions or fewer, it does not. His insight has ways to sidestep, and sometimes make use
ary biologist at Cornell University, died last led to decades of research in mathematics of, these defenses. Ever since she was an
week at age 81 of complications from Par- and physics. undergraduate, she has reached out to the
CREDITS (TOP TO BOTTOM): MARCO MARTENS; ROBERT BARKER/CORNELL UNIVERSITY PHOTOGRAPHY; THOMAS EISNER/AAAS (INSET); GETTY IMAGES/STOCKBYTE PLATINUM
kinson’s disease. Milnor says that what he loves most general public. “I serve as a self-appointed
In hundreds of journal articles on topics about mathematics is “a feeling of miracles.” spokesperson for all things six-legged,” she
ranging from spider webs to bombardier bee- He adds, “You’re working on a problem and says. In 2006, she led a National Research
tles, Eisner explored how insects and arthro-
pods defend themselves, capture prey, and
attract mates in sometimes complex ways.
With Cornell collaborator Jerrold Meinwald,
he helped found the field of chemical ecol-
ogy—the study of how animals and plants
use chemicals to communicate. An outspo-
ken conservationist, Eisner promoted the
idea of allowing companies to “bioprospect”
in the rainforest for useful chemicals in order
to raise money to protect biodiversity.
Eisner was also a pianist, a popular sci-
ence writer, and—with his wife, Maria—a
nature photographer whose images of larval
hooks (pictured), beetle hairs, and other min-
ute wonders graced many pages and covers
of Science. “He was a remarkable, amaz-
ingly accomplished individual who met every
challenge with courage and grace and good
humor. He was my personal scientific
hero,” says University of Illinois, Urbana-
Champaign, entomologist May Berenbaum, Grown on Garbage
who earned her doctorate at Cornell.
Piles of garbage left by humans thousands of years ago in the Florida Everglades may have
helped the formation of tree islands like this one, according to a new study.
Pioneer of High-Dimensional
Previously, scientists had presumed that the larger tree islands, which host two to three
Spaces Wins Abel Prize times the number of species living in the surrounding marsh, formed atop topographical
The 2011 Abel Prize in mathematics goes high spots in underlying carbonate bedrock. But during their fieldwork, Gail Chmura and
to John Milnor, a topologist and dynamical Maria-Theresia Graf, both paleoecologists at McGill University in Montreal, Canada, found
systems theorist at Stony Brook University instead concretelike layers of carbonate formed by water’s evaporation from the peaty soil.
in New York state. Worth approximately Beneath the layers were prehistoric trash heaps, or middens.
$1 million and first awarded by the Nor- Slightly higher and drier than the surrounding marsh, the middens could have offered
wegian Academy of Science and Letters in a foothold for trees, shrubs, and other vegetation, the pair reported last week at a meeting
2003, the prize has acquired a nearly Nobel- of the American Geophysical Union in Santa Fe. Bones in the trash would have been a good
level cachet among mathematicians. source of phosphorus, a scarce nutrient in the Everglades. http://scim.ag/tree-island
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NEWS
Council panel that pointed out the precari- Random Sample
ous state of pollinators in the United States.
Later, her work on bee colony collapsing
disorder helped focus attention on viral
Friendly Fires
causes of this epidemic. Just after sunset on Saturday, 19 March, archaeologist
She hopes to use the $200,000 prize to Erin Robinson waited with a small crowd of volunteers
promote citizen science, possibly by expand- at Moel y Gaer, an Iron Age hill fort in Wales not far
ing a local Illinois bee spotting program that from the English border. They were watching another
involves the general public in bee surveys. “I hill fort, Moel Fenlli, about 10 km to the southwest,
dream of taking it national,” she says. waiting for a flare to shoot up. “There was just a huge
http://scim.ag/enviro-prize bolt of excitement when it went off,” Robinson says.
“We had a huge cheer.”
A view from a Welsh hill fort.
The volunteers were part of an experiment to see
Three Q’s whether the people who occupied hill forts along the
BEIJING—Last Welsh-English border some 2500 years ago could have seen each other and maybe even sent
month, physical signals with fire. After the flare’s signal, the group on Moel y Gaer shone their flashlights at the
chemist Bai Chunli people at Moel Fenlli, who flashed theirs back, simulating light from a fire. Over the next hour,
was appointed presi- the greeting was repeated among a total of 10 hill forts.
dent of the Chinese Robinson’s doctoral research at Bangor University in Wales is on the connections between
Academy of Sciences the different hill forts, such as shared architectural styles. If these sites were occupied at the
(CAS), China’s top same time, they would have been aware of each other, the experiment shows. “The thing that
research body with I found more than anything was the emotional attachment,” Robinson says. “By seeing people
tens of thousands of scientists at dozens of with a signaling light on a fellow hill fort, maybe up to 40 kilometers away, you felt the sense
institutes across the nation (see http://scim. that you were part of one large community.”
ag/cas-pres). Science spoke with Bai about
innovation, which China, like Europe and
the United States, emphasizes as a crucial FINDINGS would require 50% of the animal’s entire
driver of future economic growth. energy stores. The paper shows a long
How a Dinosaur Is Like neck’s advantage on the ground, he con-
Q: What are the obstacles to China’s a Vacuum Cleaner tends. “Let’s just leave it there and not ask
innovation efforts? the sauropods to raise their necks.”
Previously, China had hoped that by ced- The plant-eating sauropod dinosaurs, such http://scim.ag/long-necks
ing market shares to foreign companies, we as Brachiosaurus and Apatosaurus (for-
could in exchange obtain advanced technol- merly called Brontosaurus), were the larg-
ogy and increase our capacity for innovation. est animals ever, weighing up to 80 metric
Test Tells If the Heart Fits
However, we have realized that core tech- tons and stretching up to 30 meters in length. Every year, about 4000 people world-
nologies could not be obtained this way, nor Many also sported very long necks—though wide get a heart transplant; roughly 40%
could they be purchased. Technologies that researchers have debated their purpose. Now, of them experience at least one episode of
are truly essential [to our economy] must be two scientists in the United Kingdom may acute organ rejection within a year. Usu-
developed indigenously. finally have the answer. ally patients must undergo regular biopsies
Evolutionary ecologists Graeme Ruxton of their new organ to monitor its health. The
CREDITS (TOP TO BOTTOM): GETTY IMAGES; CHINESE ACADEMY OF SCIENCES (CAS)
Q: What is your vision for CAS’s “Innova- of the University of Glasgow and David procedure is both painful and expensive, but
tion 2020” project, which sets priority R&D Wilkinson of Liverpool John Moores Uni- now a new blood test could help.
areas for the next decade? versity created a simplified mathematical Biophysicist Stephen Quake and his col-
The main goal is to solve science and tech- model of Brachiosaurus. By varying the leagues at Stanford University developed
nology problems that are of strategic impor- dinosaur’s dimensions, the duo found that its a test that monitors fragments of DNA that
tance to China’s modernization and mean- 9-meter neck gave Brachiosaurus an 80% are released into the bloodstream when cells
while to develop CAS into a world-class energy savings in foraging compared with from the transplant tissue are broken down.
research institution. The central govern- a 6-meter-long-neck. Like a clunky, old- When a transplant goes well, donor organ
ment’s investment will emphasize stable sup- fashioned vacuum cleaner with a long tube, DNA typically makes up 1% of free DNA
port for talents on the one hand, and mega- Brachiosaurus could graze widely without in the recipient’s blood. During a rejection
projects and infrastructure development on having to move its huge body. The energy event, that fraction increases to an average
the other. savings might even have allowed the dino- of 3%, the team reports online this week in
saur to browse the treetops, the pair suggest the Proceedings of National Academy of
Q: How will CAS increase its ability in a paper published online 23 March in Sciences. Researchers hope that this test can
to innovate? Biology Letters. eliminate the need for regular biopsies as a
We will center around three ideas: more Not so fast, says physiologist Roger means of rejection monitoring. The new test
democracy, more openness, and [giving] Seymour of the University of Adelaide in is likely to be available to doctors in a year’s
more prominence to talent. Australia: Pumping blood to a raised head time. http://scim.ag/organ-test
Great Quake Came Too Late cal evidence for this massive event: a sudden
drop in elevation of coastal regions, inferred
from sedimentary deposits, a sign of slip-
TOKYO—Ten years ago, Koji Minoura, a “It’s necessary to communicate research page on the upper side of a subduction zone.
geologist at Tohoku University in Sendai, findings to society,” says Yukinobu Okamura, Eight years later, a revision to the Uniform
and colleagues injected some science into a geologist at the Active Fault and Earthquake Building Code required buildings in west-
a legendary disaster. A historical document Research Center in Tsukuba, who led studies ern Washington and Oregon to be 50% more
compiled in 901 C.E. told of an earthquake that independently bolstered Minoura’s find- earthquake-resistant. Then in 1995, partly
in 869 C.E. that destroyed a castle town in ings. “We tried to do that in this case, but we because of the Pacific threat, the U.S. Con-
northeastern Japan and a subsequent tsunami weren’t in time.” gress passed the National Tsunami Hazard
that inundated the surrounding area, kill- One lesson is that incorporating geolog- Mitigation Program, which supports studies
ing 1000. Digging in rice paddies in what is ical studies of ancient earthquakes and tsu- of tsunami risk and emergency planning.
now called the Sendai Plain, Minoura’s team namis into risk assessments “is essential to The size and timing of the Cascadia earth-
found telltale marine sediments showing compensate for the limitations in the cur- quake were unclear. Those pieces of the puz-
that the tsunami ran as much as 4 kilometers rent evaluation scheme,” says Fumihiko zle turned up in Japan, where Kenji Satake,
inland. They estimated the Jogan earthquake’s Imamura, a tsunami engineer at Tohoku Uni- a seismologist now at University of Tokyo,
magnitude at 8.3 and concluded that it could versity in Sendai. and colleagues found Japanese accounts of a
recur at 1000-year intervals. “The possibility The need to revise earthquake probabil- tsunami without an apparent local cause. In
of a large tsunami striking the Sendai Plain is ity analyses extends far beyond Japan. “There Nature in 1996, they pinpointed the date of
high,” they wrote in a 2001 article in the Jour- are other subduction zones, near Java and the Cascadia earthquake as 26 January 1700
nal of Natural Disaster Science. New Zealand, where people think there is no and estimated a magnitude of 9.0. “There is a
That obscure paper is now at the center chance of a big quake” because they cling to lot of respect for [Japan’s] record-keeping dili-
of a growing debate about how quickly sci- old models of seismic processes, says Robert gence,” says Brian Atwater, a U.S. Geological
entific findings can and should influence McCaffrey, a geophysicist at Portland State Survey geologist at the University of Wash-
disaster-mitigation policies. A few years University in Oregon. But forecasts are gen- ington, Seattle.
before the magnitude-9.0 Tohoku earthquake erally based on studies covering the past sev- Japan’s Headquarters for Earthquake
struck northeastern Japan on 11 March, a eral centuries—“not long enough for the cycle Research Promotion produces seismic hazard
scientific consensus had begun to coalesce time for these big earthquakes,” he says. maps for the nation; they are used to estimate
around the idea that a Jogan-like event could Although scientists have been interrogat- potential tsunamis. The headquarters incor-
CREDIT: REUTERS
happen again. But that consensus did not ing geologic deposits for clues to the size and porates paleoseismic studies in determin-
influence seismic risk assessments, tsunami frequency of major earthquakes for several ing earthquake risk—but only in Hokkaido,
preparedness, or a review of the hardiness of decades, efforts to apply such techniques to Tanioka says. Hokkaido was the last region of
the Fukushima Daiichi nuclear power plant. ancient tsunamis are more recent. In the early modern Japan settled by ethnic Japanese, and
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NEWS
reliable records go back only to the mid-1800s, earthquake occurred before the evaluation concerned mostly about earthquake shaking,
he says. Elsewhere, the agency relies on “doc- was completed,” he says. brushed aside his concerns, he asserts.
uments allowing the estimation of earthquake Any upward revision is now also too late Japan and other countries will surely
frequency and scale [going] back 400 years,” for the Fukushima plant. The first reactor was rethink tsunami threats—just as Minoura
Imamura says. Using those records, the earth- completed in 1971, long before the Jogan intends to do. Originally, he says, he tried
quake research headquarters warned that the event appeared on the scientific radar. Plan- to “simply make clear the geological pro-
area hit by the 11 March temblor faced a 99% ners girded for a maximum 5.7-meter tsu- cess of coastal environments.” But now, “I
probability of a magnitude-7.5 earthquake nami; Tokyo Electric Power Co. estimates that want to meditate deeply on the future of geo-
occurring in the next 30 years. the tsunami that took out the backup diesel logical work [related to] tsunamis,” he says.
Okamura and colleagues conducted more generators was 14 meters high. The company The Tohoku temblor should convince the
extensive surveys in the Sendai area in the missed a chance to address the deficiency scientific community and authorities that
mid-2000s that bolstered Minoura’s original when an expert panel reviewed the plant’s magnitude-9 earthquakes can occur anywhere
findings. According to Okamura, the earth- seismic resistance in 2008. As The Washing- along subduction zones, McCaffrey says.
quake research headquarters was studying ton Post reported, Okamura told the panel Like a tsunami, the effects of the 11 March
whether and how to include Jogan in its risk about the Jogan earthquake and warned that Tohoku earthquake will spread far and wide.
assessment for the Tohoku region. “But the a bigger tsunami was possible. The panel, –DENNIS NORMILE
A R C H A E O LO G Y
us
which some Hindus see as the progenitor of last exposed to light. Gupta’s team
their traditions. drilled several 40-meter cores near the Ind
j
At a meeting* here last week, however, Indus city of Kalibangan, in today’s India, and PAKISTAN Sutle
three independent teams offered prelimi- found that river sediment deposits ceased after
Gan
Ghaggar-Hakra
nary evidence that the Ghaggar-Hakra was approximately 14,000 B.C.E., long before the
ges
at most a modest seasonal stream during and Indus culture. Gupta said in his talk that the Ara
us
bia INDIA
Ind
after the Indus flourished from 2500 B.C.E. to river may have jumped into the bed of the nS
ea
CREDITS (TOP TO BOTTOM): RAJIV SINHA / IIT-KANPUR; M. TWOMBLY/SCIENCE
1900 B.C.E. “We need more cores, but the Sutlej River to the west at this time. Hideaki
data suggests there was no big river here” in Maemoku of Hiroshima University led a Jap-
Indus times, said geologist Sanjeev Gupta of anese team that found that sand dunes sur- Dry hole. Researchers drill a core (top) in the bed of
Imperial College London in his talk. rounding the Ghaggar-Hakra are older than the ancient Ghaggar-Hakra River in India.
The findings puzzle and intrigue archae- 10,000 years, another indication any river
ologists. The Indus settlements along the present had long since dried up by that point. Clift says the drying of the Ghaggar-
Ghaggar-Hakra appear to have migrated over Maemoku’s poster gave this summation of the Hakra may reflect a drought that may yet help
time toward the river’s source. That has been would-be Saraswati: “No, it wasn’t mighty.” explain the civilization’s mysterious decline.
interpreted by some as a sign of decreasing Based on work downstream in Pakistan, However, other researchers note, even though
river flow and stress on the Indus society. If, another team, led by geologist Peter Clift no surface water flows today, the ancient
however, the river was dry or only seasonal, of the University of Aberdeen in the United channels still provide groundwater for farm-
it may prompt a re-evaluation of how Indus Kingdom, agrees that little water flowed regu- ers and might have done so in the past. And a
peoples acquired water for agriculture. “This larly in the system after 2500 B.C.E. But Clift dried-up riverbed may have been a safer place
is enormously important work,” says archae- believes the river may have simply shifted to to settle than the banks of a major river such as
*
another as-yet-unidentified channel and that the Indus, which flooded disastrously in 2010.
American Geophysical Union meeting, “Climates, Past
Landscapes and Civilizations,” 21–25 March 2011, there still may have been flow in the Ghaggar- “Now we have more questions,” Wright says.
Santa Fe. Hakra during Indus times. –ANDREW LAWLER
sources of radiation. In video released early Could the #4 pool’s structure have been from reactors or from spent fuel. Scientists
this week, what appeared to be steam con- damaged in the quake or subsequent explo- hope more detailed isotopic measurements
tinued to billow from reactor #4’s blown-out sions or both? Among possible weak points will shed light on the age and, therefore, the
frame despite continued efforts to add water. are the large doors on the side of the pool. The source of the radioactive particles.
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NEWS&ANALYSIS
Minding the pools REACTOR #4: THE SECRETS OF A SPENT FUEL POOL
Some experts believe that governments and
the nuclear power industry have done a poor What caused the loss of water in the pool, and
job of sharing information on the risk of zir- how low did the water level get?
Whether the water drained, evaporated, or boiled off
conium fires. Critics of NRC say that studies would provide key clues.
conducted for the agency likely contain rele-
vant data but have been kept classified to keep What caused the hydrogen explosion?
Zirconium alloy, which makes up the tubes holding the
the information away from terrorists. “To the uranium fuel pellets, reacts with steam to form hydrogen,
extent that any experiments have been done at which can ignite in the presence of oxygen.
all, the public doesn’t know about them,” says
spent-fuel expert Gordon Thompson of Clark What temperature was the water?
The zirconium reaction progresses at temperatures above
University in Worcester, Massachusetts. The 800˚C.
National Research Council study called on
NRC to “improve the sharing of pertinent What do recorded levels of cesium-137 outside
information” on pool risks. the plant mean?
Melted and aerosolized long-lived radionuclides suggest
The calamity at Fukushima Daiichi has a hot fire in the pool.
raised particular concerns about U.S. spent
nuclear fuel pools, which are thought to be
packed more tightly than those in Europe now mixes hot, fresh spent fuel with older highly unlikely to catch fire. Still, the indus-
or Asia. “Spent nuclear fuel may be more fuel in the pools to redistribute the heat. But try has begun a safety review of U.S. reac-
vulnerable than we thought,” says Edwin it balked at a 2008 recommendation by Jac- tors, and NRC has launched two studies into
Lyman of the Union of Concerned Scientists zko—speaking in an unofficial capacity—to U.S. plant safety that could lead to new rules
in Washington, D.C. The nuclear industry transfer U.S. fuel older than 5 years to dry on spent fuel. –ELI KINTISCH
has added additional sprayers to pools and concrete casks, where the cooled fuel is With reporting by Dennis Normile in Tokyo.
C H E M I ST RY
tricity, reforming water in either case. This Later this year, a company he founded, Sun
means that, in theory, anyone with access to Catalytix, expects to produce a prototype
water can use it to create a cheap, clean, and electrolyzer using the cobalt catalyst and an
available source of fuel. The splits. A new silicon wafer can make hydrogen external electricity source to split water to
“It’s spectacular,” says Robert Grubbs, a fuel from sunlight and water. generate hydrogen. Sunlight-to-fuel water
chemist at the California Institute of Technol- splitters using both new catalysts will likely
ogy in Pasadena, who saw the presentation were expensive. Earlier this week, Nocera follow after that, he says. In addition, Nocera
here last weekend at the biannual meeting reported devising a cheap catalyst that uses is teaming up with Ratan Tata, chair of Tata
of the American Chemical Society. “There’s three different metals to form H2. Group, an Indian conglomerate, in hopes of
still obviously a long way to go” to make the Nocera didn’t reveal the makeup of the producing a refrigerator-sized power plant
new device into a rugged, real-world technol- new catalyst, as the work is not yet published, capable of converting sunlight and water
ogy, Grubbs says. But the approach is impor- and he is in the process of patenting it. But into electricity. The goal is cheap, renewable
tant because its potential low cost could he notes that finding his new H2-forming power for vast numbers of people lacking
make it widely available. It “has a chance of catalyst was made easier by the fact that his access to large amounts of energy.
being scalable,” Grubbs says. O2 catalyst works in water, a more benign –ROBERT F. SERVICE
“If it wasn’t for this little machine, I’m not sure what I would
have done.” —Armen M. Abramian
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the report concludes. “The psychiatric paperwork, which would have brought his ernment to mandate each of those measures.
records offer considerable circumstantial psychiatric problems to light. –YUDHIJIT BHATTACHARJEE
The Rise of
Animal Law
Will growing interest in how the legal system
deals with animals ultimately lead to changes
for researchers?
AT THE OREGON NATIONAL PRIMATE RESEARCH CENTER IN
Beaverton, some 20 law students tour the outdoor enclosures that
house breeding colonies of macaque and rhesus monkeys and talk
with the veterinarian in charge of their care. “It’s a very powerful trip
for the students,” says Kathy Hessler, who teaches a course on animal
law at Lewis & Clark Law School in nearby Portland. “Some of them
are really shaken.” That’s not because they see violations of the law,
Hessler explains: “The primate center is working very hard to meet the
requirements under the law, but there’s a disconnect between what the
law provides and what the students think the animals need.”
Hessler and her class are part of the rapidly growing field of animal
law, a relatively new area of study that examines—and often challenges—
how the law treats animals. As recently as 2000, only a handful of law
schools in the United States offered courses in animal law. Now roughly
120 do. These include several of the nation’s premier law schools, includ-
ing Harvard, Stanford, and Columbia, which have established endowed pro-
grams in animal law thanks to $1 million donations from TV celebrity and
longtime animal rights activist Bob Barker (see table). Some of those who
teach animal law courses, including Hessler, describe themselves as activists.
Others shy away from that label. But many take issue with a legal sys-
tem that treats animals as property and provides few mechanisms for
protecting their interests in court.
Some of these legal scholars have proposed strategies for
advancing animal rights through steppingstone cases that erode the
notion of animals as property and grant them some of the same pro-
tections people have. Others, drawing inspiration from antislavery
and civil rights movements, advocate a more direct effort to establish
fundamental rights for animals—at least for more cognitively sophisti-
cated species such as great apes and cetaceans (see sidebar, p. 30). No one
is arguing that orangutans should be given the right to vote, but some legal scholars
see no reason why apes shouldn’t have rights similar to those of a child or a person in a
coma. Whether these efforts will succeed remains to be seen. But if they do, there could
A movement is born
Joyce Tischler has loved animals since she was a child. After graduating from law school in
1977, she began searching for a way to use her law degree to help animals. She and a like-
minded colleague put an ad in a San Francisco legal newspaper to see whether anyone else
shared their interests. “About six people showed up to our first meeting,” Tischler says. “We
formed a little group and met for several years to educate ourselves about the laws that relate to
animals.” That group grew into the Animal Legal Defense Fund (ALDF), a Cotati, California,
organization that has been a driving force in the growth of animal law.
ALDF’s efforts include litigation, legislation, and education. The group has filed scores
of civil lawsuits to protect animals and assists with hundreds of criminal prosecutions each
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SCIENCE www.sciencemag.org
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5 8
2 3
1
5 6 7 8 9
SPAIN SWITZERLAND AUSTRIA CHINA NEW ZEALAND
It became the first country In 2009, its Supreme Court It banned research on apes The country's first anti- In 2000, it became the first
to acknowledge rights upheld a ban on neuro- in 2006. In 2008, its cruelty law, drafted in country to ban most uses 9
for great apes with a 2009 science experiments on Supreme Court declined to 2009, would provide of great apes for research,
law granting rights to life, macaques. In 2010, voters acknowledge personhood protections for pets as testing, and teaching.
liberty, and freedom rejected a plan to appoint for a chimpanzee, re- well as animals used in
from torture. state-funded lawyers to buffing activists hoping to agriculture, entertainment,
represent abused animals. gain guardianship of a and research. It has yet to
chimp at a struggling be enacted.
animal shelter.
year. In 2010, ALDF and other animal pro- tice Section in 2004. The committee sponsors viduals and considered part of the family
tection groups successfully sued to stop continuing education courses for practicing circle,” says David Favre, a leading animal
BP from carrying out “controlled burns” lawyers and develops policy proposals aimed law scholar who teaches at Michigan State
of spilled oil in the Gulf of Mexico that at improving animal welfare. The Association University College of Law in East Lansing.
would have endangered sea turtles. ALDF of American Law Schools started a section on People’s bonds with their pets tend to fos-
drafted a 2008 Virginia law that toughened animal law in 2008 to promote education and ter protective attitudes toward other ani-
penalties for dogfighting in the wake of the professional development. mals, Favre says. That’s reflected in a spate
Michael Vick scandal. (Vick, an Ameri- Tischler and other animal law pioneers of recent state laws that punish not only ani-
can football star, was convicted in 2007 on attribute the field’s rapid growth to a com- mal cruelty but also neglect. Fourteen states
dogfighting charges.) Tischler says she’s bination of societal change and scientific now have laws that explicitly prohibit leav-
especially excited about a current proj- advances in animal cognition. “Pets are ing animals in an unattended vehicle in hot
ect in which ALDF lawyers are working becoming of increasing importance to indi- or cold weather, for example.
with scientists and leaders from govern-
ment and industry on strategies for imple-
menting a 2007 National Research Council The Price Is Right: $1 Million. As the game show’s host for 35 years, Bob Barker gradually
report urging companies to adopt alterna- eliminated fur and leather prizes and signed off each episode with a plea for viewers to spay and neuter their pets.
More recently, he’s written $1 million checks to eight leading law schools to endow programs in animal rights law,
tives to toxicity testing in animals. ALDF’s
plus two to his alma mater, Drury University in Springfield, Missouri, for undergraduate animal rights studies.
Web site encourages visitors to petition
CREDIT (BOTTOM): GENE BLEVINS/LA DAILY NEWS/CORBIS
At the same time, books such as The According to animal law scholars and ing potentially precedent-setting cases. One
Omnivore’s Dilemma and movies such as practitioners, the law has not kept up with sci- of the most active areas involves monetary
Food, Inc. have increased public concern ence and society. “The legal and even moral awards for emotional distress suffered by pet
about how animals are raised and slaugh- distinctions we make about how we treat [ani- owners, says Bruce Wagman, a lawyer who
tered for food, and the law is changing in this mals] are based on the choices humans make teaches at the University of California (UC)
arena, too. In 2008, for example, California about using animals and have nothing to do Hastings College of the Law in San Fran-
voters approved a ballot measure that will with the scientifically determined capacity of cisco and developed the first casebook on
outlaw cages that restrict the movement of animals to feel pain or be self-aware or any animal law. “That’s a hotbed of litigation and
egg-laying hens, calves raised for veal, and of those things,” Hessler says. A pet rat, a judicial opinions,” Wagman says.
pregnant sows (see map, p. 29). lab rat, an endangered wild rat, and a city rat Historically, in cases in which a pet has
In parallel with these societal changes, that gnaws its way into someone’s basement been killed, U.S. courts have limited awards
research with a wide range of nonhu- all have a similar interest in staying alive and to the purchase price or replacement cost of
man animals has demonstrated behaviors avoiding pain, Hessler says, but the law now the animal—typically a few hundred dollars.
and traits once thought to be the exclusive treats them very differently. “Inclusion of the In recent years, grieving pet owners have
domain of humans, including cooperation, interests of the animals themselves is what is argued that emotional bonds with pets are
altruism, empathy, and a sense of fairness. novel in the animal law approach,” she says. comparable to those with family, and they’ve
“Science is incredibly important to animal sought monetary compensation for emo-
law,” says Mariann Sullivan, a New York Case studies tional distress. Courts often award damages
City lawyer who chairs the ABA’s Animal Some students may take animal law courses for emotional distress after the death of an
Law Committee. “Cognitive ethology is because they’re already interested in animal immediate family member, but not for loss
really what animal lawyers rely on in argu- protection, but instructors say many more of property, Wagman says. Pet owners have
ing that conditions for animals in any area sign up simply because the field is new and had some success when the pet’s death was
should be improved.” fast-moving. Coursework includes study- caused intentionally. In 2006, for example,
A Road Map for Animal Rights In law review articles and books, Wise has laid out a philosophical
framework for animal rights. He argues that some nonhuman animals,
In 1772, a slave named James Somerset won his freedom in an English court. particularly great apes and cetaceans, are cognitively complex in many of
Months earlier, three people acting on his behalf applied to the Court of the same ways that humans are: They can have desires, act intentionally,
King’s Bench for a writ of habeas corpus, which would require Somerset’s and have some sense of self. Therefore, Wise asserts, they deserve basic
captor—he’d escaped his owner and been recaptured—to bring Somerset “dignity” rights, such as the right not to be harmed or held in a distress-
before the court to determine the legality of his imprisonment. In deciding ing environment. Human infants and people in a vegetative state have
that English common law provided no basis for holding Somerset, the court such rights, and Wise argues that a chimpanzee of similar or greater intel-
brought an end to slavery in that country. ligence should be granted them as well.
The case is a potential blueprint for establishing personhood and legal Getting a judge or jury to consider these arguments is the goal of NHRP.
rights for animals, says Steven Wise, a lawyer and legal scholar in Coral Since 2007, Wise has recruited more than 50 volunteers, including law-
Gables, Florida, and founder of the Nonhuman yers and sociologists, who are working to iden-
Rights Project (NHRP). In the eyes of the law, ani- tify potential plaintiffs and determine which
mals are considered things to be owned, as slaves jurisdictions are most likely to be sympathetic
once were, Wise notes: “The story of James Som- to their arguments and which legal strategies
erset is a metaphor for how any legal thing [such are most likely to be effective. He estimates that
as an animal] can use the court system to become they’ve spent a cumulative 20,000 hours ana-
a legal person.” lyzing dozens of legal and sociological issues in
That’s a goal Wise has been working toward all 50 states.
for 30 years, and he now says his group is close The first case will likely involve an animal
to filing lawsuits on behalf of intelligent animals being held in substandard conditions: perhaps a
such as chimpanzees and dolphins in an attempt dolphin kept in a small pool at an aquarium or a
to convince courts that at least some nonhuman chimpanzee confined to a small cage at a zoo or
animals meet the requirements of legal person- research facility. NHRP will file a lawsuit in trial
hood and should be accorded certain basic rights. court, probably using habeas corpus or another
“We’re hoping to file the first suits, if everything common law writ, de homine replegiando, used
goes right, in 2012, and if everything goes wrong, centuries ago in slavery cases.
in 2013,” Wise says. If the trial court dismisses the case, Wise
As improbable as it may sound, there’s a says he will appeal all the way to the state’s
chance he will succeed, says Richard Cupp, a highest court. NHRP is combing over the judi-
CREDIT: ASSOCIATED PRESS
legal scholar at Pepperdine University in Malibu, cial decisions of state appellate court and high
California. “Steven is a very smart guy, and he’ll Rattling cages. Steven Wise wants court judges to determine their judicial philos-
choose his jurisdictions very carefully,” Cupp says. courts to acknowledge “dignity” ophies. Volunteers are also looking for courts
“In the short term, I suspect he won’t be success- rights for some animals. sympathetic to civil rights and animal welfare
ful, but I could be wrong.” issues, as well as those that have ruled in favor
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a Washington state judge awarded a woman Such cases erode the notion of animals as gation and lobbying efforts at HSUS involve
$5000 for emotional distress after a boy stole property and move them closer toward some pets, livestock, and wildlife, but the group
her cat from her porch and took it to a nearby of the protections and privileges accorded to also takes on issues involving research ani-
schoolyard, where he doused it in gasoline people—a move that concerns some advo- mals when the opportunity arises, including
and set it on fire. However, when a pet dies cates of biomedical research. But Favre, pushing for the Great Ape Protection Act,
as a result of negligence—due to veterinary whose writings on animal law and philoso- which would ban invasive research on those
malpractice, for example—few if any courts phy are required reading in many animal law animals (Science, 13 March 2009, p. 1414).
have been willing to award damages for emo- courses, finds it long overdue. In a 2010 arti- Some research advocates are wary of all
tional distress, Wagman says: “That’s the cle in the Marquette Law Review, he argues these trends. “Those of us who represent sci-
dividing line now, but people are constantly for classifying domestic animals as “living entists who work with animals don’t look on
trying to push that envelope.” property.” This designation would acknowl- this as a positive development, although a
The law is also changing rapidly in how edge that animals have interests—in stay- lot of what they’re doing we have no objec-
animals are dealt with in the establishment ing alive, moving freely about, and socializ- tion to,” says Deborah Runkle, a senior pro-
of trusts and custody cases. Forty-five states ing with other members of their species, for gram associate at the American Association
have statutes enabling people to set up trusts example—that should be weighed against for the Advancement of Science, which sup-
to provide for their pets after their death, up human interests by the legal system. ports the use of animals in scientific research
from eight states in 2000. Pets are increas- Favre argues that the law already provides (and publishes Science). “It’s not an imme-
ingly an issue in divorce proceedings, too, modest rights for animals to protect these diate threat, but it’s something that needs to
with judges being forced to decide whether interests: Anticruelty laws protect their right be watched,” says Alice Ra’anan, director
to treat pets as property, whereby whoever not to be harmed, for instance. He advocates of government relations and science policy
bought the animal keeps it, or more like chil- expanding such existing rights and creat- for the American Physiological Society. “If
dren, for whom consideration is given to who ing new ones. Perhaps most provocatively, there’s a concern, it’s that there are relatively
can provide the best home. he argues in a 2005 article in the Michigan few lawyers who are interested in this who
State Law Review that animals, through self- have an understanding and appreciation of
appointed attorneys, should have the right to animal research and of the laws that already
of gay marriage, which Wise suspects might sue humans who violate their primary inter- exist to protect animals.”
reflect a sensitivity to equality that would work ests. Currently, animals do not have legal The growth of animal law both reflects
in his favor. standing to sue, and animal welfare advo- and encourages societal change, says Richard
People have tried previously—and unsuc- cates have had limited success suing on Cupp, who writes and teaches about the legal
cessfully—to gain legal standing for animals. their behalf. That’s because courts will only and moral standing of animals at Pepperdine
In 1998, Wise lost a case in which he argued consider harm done to a human being, leav- University School of Law in Malibu, Califor-
that a dolphin named Kama had legal stand- ing animal advocates in the difficult posi- nia. Cupp applauds legal protections for ani-
ing to sue the New England Aquarium to pre- tion of arguing that they themselves have mal welfare, but in several law review articles
vent being transferred to a Navy marine mam- been harmed by an animal’s suffering. Favre he has argued that establishing legal rights for
mal facility. In 2004, a district judge in San argues that an animal’s interests should be animals would not serve society’s best inter-
Francisco ruled that whales, porpoises, and part of the legal equation. ests. To pick one example, if animals were
dolphins (represented by a self-appointed given the right to sue as Favre proposes, activ-
attorney) did not have legal standing under Reason for concern? ists suing on behalf of research animals could
federal law to sue the Navy to stop alleg- Although the growth of animal law is unde- bog down universities with endless lawsuits.
edly harmful sonar testing. In both cases, niable, the implications for animal research “We could lose a lot of research that might be
the judges ruled that only “persons” can sue are uncertain. There are serious barriers very helpful,” Cupp says.
under federal law and that the legislators who to implementing the kind of theoretical At a more philosophical level, Cupp
wrote the laws did not intend the definition of changes to the legal system that Favre and argues that talking about rights for animals
“person” to include cetaceans. others advocate, says Taimie Bryant, who obscures the fact that at the end of the day any
Wise says he’s learned from his mistakes teaches animal law at the UC Los Angeles legal case involving animals will be decided
in the Kama case. That’s why he’s focusing on School of Law. “How you would take that by humans. The developing field of animal
state common law. “Common law is the law that from academia and put it into a practical set- law should focus on emphasizing and delin-
judges make, so you don’t get into this issue ting where most entities that use animals eating humans’ moral responsibility toward
of legislative intent,” he says. “We’re looking have more lobbying power than academics other animals rather than on establishing legal
for courts that view common law as elastic, as isn’t clear,” Bryant says. She thinks changes rights, Cupp says: “We’re stepping toward
something that changes as morality changes or that affect scientists are more likely to come something, and the fight is over what we
as new scientific facts come in” about the cogni- from societal change and the efforts of orga- should be stepping toward.” –GREG MILLER
tive capabilities of nonhuman animals. nizations like the ALDF and the Humane
If he wins, the animal in question will be Society of the United States (HSUS). Read more about animal law cases and issues
moved to a better home. But more impor- Indeed, the HSUS legal team has grown online:
tant from Wise’s perspective, a legal door that from three full-time lawyers in 2005 to 16 Animal Legal Defense Fund: http://www.aldf.org/
has been slammed shut will have opened just today, and the organization draws from a net-
a crack, enabling him and others to push for work of 2000 lawyers who have volunteered Animal Legal and Historical Center at Michigan State
University College of Law: http://www.animallaw.info/
more rights for more animals. “Win or lose, to work pro bono, says Jonathan Lovvorn,
we’re going to keep going,” he says. –G.M. vice president and chief counsel of animal National Association for Biomedical Research, Animal
protection litigation and research. Most liti- Law Section: http://www.nabranimallaw.org/
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HIT consortium, investigating connections of obesity, notes Ehrlich. “If we can provide rial genes are active in a person and not just at
between microbial genes in human intestines evidence that they [at least] provide a contri- which bacteria are there. Scientists have found
and human health. By comparing such genes bution, then we can go and find a treatment.” that although the species mix of the micro-
from obese and nonobese individuals, he and biome may vary significantly from one person
his colleagues have found that certain sets of Help from the Amish to the next, those individuals often still have
bacterial genes and bacteria correlate with Other work presented at the microbiome equivalent complements of bacterial genes at
excess weight and insulin resistance. meeting indicates that sorting out this cause- work inside them. Through such gene analy-
The researchers first sequenced all the bac- and-effect puzzle will be tough. Frustrated by ses, researchers can begin to better assess
terial genes in stool samples of 177 Danes, 55 the inconsistent results others were getting what the bacteria in the gut are really doing to,
who were thin and 122 who were either over- when they looked for connections between the or for, their host, Fraser-Liggett notes.
weight or obese. Although the researchers microbiome and obesity, Fraser-Liggett and Gordon suggests that more clarity on the
concluded that most participants in the study her colleagues examined 400 adult Amish liv- obesity-microbiome issue will also come
had roughly 600,000 distinct bacterial genes ing in Pennsylvania. Amish marry within their from using the guts of mice as bioreactors
in their guts, almost one-third of the obese group and have very similar lifestyles, envi- for human microbes. His group has pio-
study participants had only about 360,000 ronment, and eating habits—they even cook neered the study of germ-free mice, which
such genes, 30% to 40% fewer. A similar per- in communal kitchens. Thus, Fraser-Liggett are grown in a sterile environment from
centage of 36 obese French people had a com- hoped to eliminate some of the variables that birth, and he is now exposing such mice
parable dearth of gut bacteria genes, Ehrlich might have confounded other studies. to bacteria from human guts. Once those
reported at the Vancouver meeting. Moreover, The body mass index of Amish ranged human microbes have established residence
the obese people “don’t have as great a bac- from 16 to 51 (30 is obese), and some of the in the guts of the mice, Gordon then feeds
terial diversity” in their the animals a variety of
guts, Ehrlich reported. One human diets. Using these
missing microbe in that rodent proxies, he can
group was a methane pro- thus track how different
ducer, leading Ehrlich to diets affect the “human”
wonder whether “the car- microbiomes, assessing
bon that does not get out the bacteria as often as he
[of the body] as gas could needs to to get a dynamic
be incorporated as fat.” picture. “You can sample
When they looked many features between the
at medical histories of microbial community and
all their study subjects, the host,” he says.
Ehrlich and his colleagues Despite his role in ignit-
found that the obese peo- ing the study of obesity
ple with fewer gut bacte- Personalized microbiota. and microbiomes, Gordon
ria genes were more likely Germ-free mice grown in resists the idea that our gut
to be insulin resistant than sterile environments and bacteria are the sole expla-
were the obese people given human gut microbes nation for the growing
who had a typical tally of provide a way to test links number of obese people.
intestinal microbial genes. between bacteria and obesity. “It’s not the dominant part
These obese people also of the problem; excessive
tended to have higher than energy intake is,” he con-
normal white blood cell counts, suggesting obese ones also had metabolic syndrome. tends. The simplistic notion of only chang-
that they were in a state of low-level inflam- Fraser-Liggett and her colleagues captured ing one’s gut bacteria to lose weight has been
CREDIT: LAURA KYRO/CENTER FOR GENOME SCIENCES & SYSTEMS BIOLOGY
mation, Ehrlich said. Some researchers have a snapshot of the gut microbiome of each “hyped a lot,” he complains.
found evidence of a link between inflam- Amish by obtaining stool samples, sequenc- Others, such as microbial ecologist Lip-
mation and obesity (Science, 17 December ing the DNA in them, and using the 16S ribo- ing Zhao of Shanghai Jiao Tong University
2010, p. 1621). somal subunit gene often used to tell bacteria in China, are more convinced that the micro-
Ehrlich and his colleagues have also tested apart, identifying any microbial components. biome will prove important when it comes
whether the types of bacteria in a person’s gut Although the scientists did detect some dif- to obesity. “Increased abundance of ‘bad
can “diagnose” obesity. Using just six meta- ferences in certain bacteria between obese genes’ and [a] decrease of ‘good genes’ in
species, they were able to correctly predict and lean Amish, they didn’t find the dramatic our diet-disrupted gut microbiome [may]
whether a person was lean or obese more than shifts that Gordon had documented between be the primary driving force for this obesity
80% of the time, he reported. When research- lean and obese mice, Fraser-Liggett reported epidemic,” Zhao says.
ers try to make the same predictions by con- at the meeting. Even if Zhao’s prediction proves right,
sidering all of a person’s genetic risk factors One problem may be that simply taking a the studies to date make clear that the con-
for obesity, they are right only 58% of the census of the bacteria present in a person’s gut nection between the microbiome and excess
time, Ehrlich pointed out. may not be enough. “16S [analysis] is not very weight is complex, Fraser-Liggett says. For
At this point, however, it’s unclear whether informative,” Ehrlich says. “We need to go to those looking to bacteria to stem the obesity
the differences in intestinal microbes are “the more precise measures.” Increasingly, micro- epidemic, she concludes, “there’s clearly no
cause, a contribution to, or the consequence” biome researchers are looking at what bacte- magic formula.” –ELIZABETH PENNISI
MemberCentral is the new website that looks at science through the eyes of AAAS members. It
celebrates their achievements—like Dr. Alving’s vaccine patch—and their shared belief in the
transformative power of science. Use MemberCentral to connect with other members, learn
about work being done in other fields, and get fresh perspectives on issues ranging from
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A balance of signals Fighting fungal infection
43 47
LETTERS I BOOKS I POLICY FORUM I EDUCATION FORUM I PERSPECTIVES
LETTERS
edited by Jennifer Sills
Protecting Invaders for Profit selling the invasive hare (Lepus europaeus) by millions to Europe (4).
In Patagonia, many farmers hunt or poison native guanacos (Lama
HUMANS HAVE SPREAD SPECIES TO NONNATIVE ENVIRONMENTS FOR guanicoe) to avoid competition with nonnative livestock or red deer.
generations. In turn, these species can become invasive, threatening Some nonnative species are even advertised as “typical” in the coun-
native species. There has been much discussion about the best way to tries where they are introduced. As a result, the citizens of southern
control invasive species and protect native species (1). However, one South America do not consider invasive species a problem (5).
point has been overlooked: In some cases, human commercial activity It is impractical to eradicate some invasive species. However, by
values invasive species more than valuing them more than native species, we are promoting their expan-
the native species, and danger- sion and endangering the native species. The discussion about inva-
ous behavior ensues. For example, sive species must focus on the prevention of their social and com-
trout (e.g., Salvelinus sp.) and red mercial overvaluation. We must also educate both local communities
deer (Cervus elaphus) were intro- and governments about the importance of maintaining and recovering
duced to Argentina and Chile from native species populations. In the long run, the negative consequences
the United States and Europe about of species introductions are greater than their short-term commercial
100 years ago for fishing and hunt- benefits (6). SERGIO A. LAMBERTUCCI* AND KARINA L. SPEZIALE
ing purposes. Today, these species Ecotono Laboratory, INIBIOMA (Comahue National University-CONICET), Bariloche, Argentina.
are invasive, but they represent an
*To whom correspondence should be addressed. E-mail: slambertucci@comahue-conicet.
economic resource for tourism and gob.ar
sport (2, 3). Because of their com-
mercial value, the Argentinean Native species at risk. Farmers in References
1. D. M. Richardson, Ed., Fifty Years of Invasion Ecology: The Legacy of Charles Elton
and Chilean governments main- Patagonia hunt guanacos to protect (Wiley-Blackwell, Oxford, 2011).
tain healthy populations by set- nonnative deer. 2. M. A. Pascual et al., Front. Ecol. Environ. 7, 533 (2009).
ting restrictions on hunting and 3. T. Veblen et al., Conserv. Biol. 6, 71 (1992).
4. S. A. Lambertucci et al., Environ. Sci. Technol. 44, 7759 (2010).
fishing seasons and the number of fish allowed per day. Similarly, the 5. K. L. Speziale, S. A. Lambertucci, Nature 467, 153 (2010).
Argentinean government allows local people to profit by hunting and 6. D. Pimentel et al., Agr. Ecosyst. Environ. 84, 1 (2001).
Culturomics: Statistical two common traps. First, they assume that the period than another, it does not necessarily
total number of words published in English mean that there were more dinosaurs—it may
Traps Muddy the Data is a meaningful statistic. Although this fig- be that there was more mud.
ure seems impressive—and has tradition- ELISE E. MORSE-GAGNÉ
IN THEIR GENERALLY WORTHWHILE DISCUS- ally been used to validate English speakers’ Department of English, Tougaloo College, Tougaloo, MS
sion of developments in the English language belief that their language is exceptional [e.g., 39174, USA. E-mail: egagne@tougaloo.edu
(“Quantitative analysis of culture using mil- (1)]—it primarily reflects the large number Reference
CREDIT: MARY FRANCES HOWARD/WIKEMEDIA COMMONS
lions of digitized books,” Research Article, of English speakers and their relatively high 1. H. Bradley, The Making of English (MacMillan, London,
14 January, p. 176), J.-B. Michel et al. fall into per capita publication rates. The statistic has 1904; reprinted by Dover, New York, 2006), p. 78.
millions of digitized books,” Research Article, tic and points out that such measures are usu-
14 January, p. 176) is an important step for- ally associated with rather dubious attempts
ward in using current digital techniques as a to prove the superiority of the English lan-
window into history. Although Michel et al.’s guage. We share her concern. The concept of
study was rigorous, the selection of books has a “word” is a fuzzy notion, and ambiguities in
certain drawbacks. First, the sample reflects how it is defined invariably affect the results
not all published books, but only those that of any lexical census. Yet the size of the Eng-
Google or their partners deemed worthy lish lexicon remains a perennial question, and
of digital reproduction. Second, and more a working definition is needed if we hope to
important, books are inherently more distant address whether and how our vocabulary is
from the pulse of a culture than periodicals, growing. As such, we dealt with the ques-
in particular newspapers. Book publishing has tion as best we could: We explicitly defined
a substantial lag time to print; periodicals are the notion of “word” as a meaningful string
closer to real-time. Furthermore, as we move of alphabetic characters that is free of typo-
further away from news media, we see a shift graphical errors and that appears in the text
toward greater analysis, filtering, and a nar- of published books with a frequency greater
rowing of subjects. For these reasons, anal- than one part per billion. Crude though it may
yses of culture based on the written record be, this approach avoids many of the subjec-
should include a wide variety of texts. One of tive judgments associated with other attempts
the ultimate challenges to this type of research to measure the size of the lexicon. We agree
is representing information in a manner that with Morse-Gagné that the resulting count of
is effective and relevant to viewers within our over a million words should not be used to
culture. TIM SCHWARTZ justify anglophilic chauvinism.
Department of Visual Arts, University of California, San Diego, We disagree with Morse-Gagné’s argument
La Jolla, CA 92093–0327, USA. E-mail: tim.c.schwartz@ that our measurements of lexical size are con-
gmail.com sequences of the number of English speak-
ers and their publication rates. Our methods
Response require each word to appear with a frequency
WE THANK MORSE-GAGNÉ AND SCHWARTZ FOR of greater than 1 part per billion in the cor-
their Letters, and we are happy to have the responding time period. (Each time period is
opportunity to clarify. represented by many billions of words.) Thus,
Morse-Gagné questioned whether the size to use Morse-Gagné’s analogy, our count
AAAS is here – of the English lexicon is a meaningful statis- of “dinosaur footprints” included careful
To learn more, sively with Blue, the bird who flew 16 hours in a wind tunnel.
visit aaas.org/plusyou/entrypoint News of the Week: “New high-tech screen takes carrier test-
ing to the next level” by J. Couzin-Frankel (14 January, p. 130).
A caption incorrectly states that Lesch-Nyhan syndrome, a rare
childhood disease, occurs when both parents carry the mutated
gene. In fact, the syndrome is an X-linked disorder, so only the
mother needs to be a carrier.
W
hy have some human societies ies, he argues, was con- argues that these were sur-
A Global Perspective
achieved greater scientific accom- veyed across the Muslim mounted through a higher liter-
plishments than others? In Intel- and Chinese realms but led by Toby E. Huff acy rate and the rise of news pub-
lectual Curiosity and the Scientific Revolu- to little further innovation. Cambridge University Press, lications. Perhaps adaptation was
tion, Toby Huff takes a cultural perspective to Although Huff gives Cambridge, 2011. 368 pp. $90, also inhibited by greater struc-
explain Western dominance in the sciences. credit to notable inquisitive £60. ISBN 9781107000827. tural inertia in Islam and Chinese
Paper, $27.99, £17.99.
Distinguishing engineering prowess (such researchers in the Islamic religious traditions. For example,
ISBN 9780521170529.
as the construction of hydrological systems) tradition (such as Ibn al- Muslim scientists, despite their
from scientific inquiry, he argues that a “curi- Haytham in optics and Ibn potential and intellect for innova-
osity deficit” in the Orient led to scientific Bajja in the science of motion), he takes the tion, were prevented from achieving break-
stagnation there. inability of such stalwarts to create a larger throughs in anatomy because of Islamic pro-
Huff (a sociologist who has turned to the scientific enterprise in their societies as indi- hibitions on dissection and an “aversion to
history of science) begins by laying out evi- cating a systemic cultural problem. The origi- artistic representation of the human body.”
dence for Western ascendance in the sciences nal scientific achievements within the Islamic In the case of China, Huff highlights the
during the late 16th and 17th centuries. Show- tradition largely occurred between the 10th work of Xu Guangqi as a proponent of sci-
ing little patience for those who romanticize and 12th centuries, when there was a willing- entific inquiry after his conversion to Chris-
oriental equivalence in scientific achieve- ness for collective learning and a transmis- tianity by Jesuit missionaries. The Chinese,
ment, he convincingly argues how key scien- sion of Greek texts to Western Europe. How- however, were reluctant to widely dissemi-
tific discoveries (from the laws of planetary ever, the commendable contributions of the nate the new knowledge, and much of the
motion to anatomical function) were largely “Arab masters” in areas such as trigonometry telescope’s use was relegated to ratifying
products of occidental science. He further were confined. Like earlier Greek discover- cosmological myths. Huff ’s account falters
challenges the notion of collective learning ies, Muslim contributions to science atro- slightly at this point, because he diminishes
through colonialism by noting that much of phied and did not lead to historically trans- the role of Christian evangelism in also hin-
the West’s colonial ventures in the East began formative inventions. Huff also convincingly dering scientific knowledge transfer. The
much later (in the 19th century). Focusing on dismisses specific claims of Arab scientific ulterior religious motives of the Jesuits may
Chinese and Islamic societies, he argues that influence on the West, such as the impact of have prompted the reluctance of the Chinese
most consequential knowledge transfer that Nasir al-Din al-Tusi on Copernicus. to embrace scientific transmission of knowl-
occurred was in fact from West to East, par- One senses a strong undercurrent of Prot- edge. Had the transmission of science been
ticularly by Jesuits in China. estant exceptionalism throughout Huff ’s for purely societal good, its reception may
A case study of the invention of the tele- narrative, in keeping with his earlier work have been different indeed.
scope provides the book’s core example of and admiration for Max Weber ( 1). He Huff does not explore ecological factors,
Western scientific superiority. Using rigorous claims that religious impediments to science such as those discussed by Jared Diamond
historical analysis, Huff carefully traces the were less substantial in Europe than in other (2), that might offer further insights into a
knowledge of optics that led to parts of the world Western propensity for scientific innovation.
this instrument and the subse- and that episodes, Nor does he consider developments in Africa,
quent transfers of the science such as Gali leo’s Mesoamerica, or Oceania.
and telescopes to China, India, conflicts with the Despite Intellectual Curiosity and the Sci-
and the Ottoman Empire. He Church, have been entific Revolution being somewhat circum-
offers ample allusions to pri- overplayed by histo- scribed by Huff’s sociological and geographic
mary texts and illustrations rians. Despite many causality, he should be commended for boldly
alongside critical appraisals tensions, Christian tackling a topic that deserves further histori-
of secondary commentaries. Europe had a greater cal analysis. While inquisitive impulses are
Huff supplements this core capacity to accept possible in any society, some have been able
case with considerations of the scientific enterprise. to embrace this essential scientific attribute
invention of the microscope, Referring to Mar- more so than others. Instead of feeling threat-
the development of microbiol- tin Luther’s Wit- ened by this revelation as a Western idea, all
ogy, and the evolution of early tenberg campaign, societies should strive for scientific excellence
physics (particularly pneumat- Huff comments that as a fundamentally human quest.
CREDIT: COURTESY TOBY HUFF
05405, USA. E-mail: saleem@alum. Johann Adam Schall von Bell’s Trea- a challenge on the
mit.edu tise on the Telescope (1626). door of the Great 10.1126/science.1204095
SCIENCE IN FILM he calls the “law of accelerating returns,” the premature death of his father at age 58.
which is Moore’s law (the doubling of com- Fredric Kurzweil was a professional musician
puting power every year) on steroids, applied who, Ray’s mother says on camera, was never
The Immoralist to every conceivable area of science, technol- around while his charge was growing up. Like
ogy, and economics. father, like son—Kurzweil’s own workaholic
Michael Shermer While Ptolemy’s portrayal of Kurzweil tendencies in his creation of over a dozen
is unmistakably positive, to his credit he companies starting when he was 17 meant he
B
eware the prophet who proclaims that includes several critics from both religion and never really knew his father. As the film por-
the apocalypse, the resurrection, or science. Radio host Chuck Missler, a born- trays the tormented inventor, Kurzweil’s mis-
the biggest thing to happen to human- again Christian who heads sion in life seems more focused
ity ever will arrive in the prophet’s own life- the Koinonia Institute (“ded- Transcendent Man on resurrecting his patriarch
time. It is our natural inclination to assume icated to training and equip- than rescuing humanity.
The Life and Ideas
that we are special and that our generation ping the serious Christian to An especially lachrymose
of Ray Kurzweil
will witness the new dawn, but the Coperni- sojourn in today’s world”) moment occurs when Kurzweil
Barry Ptolemy, Director
can principle tells us that we are not special. proclaims: “We have a sce- is riffling through his father’s
Thus, the chances that even a science-based nario laid out that the world Ptolemaic Productions journals and documents in
and Therapy Studios, USA,
prophecy such as that proffered by the futur- is heading for an Armaged- a storage room dedicated to
2009. 83 minutes.
ist, inventor, and scientistic visionary extraor- don and you and I are going preserving his memory until
http://transcendentman.com/
dinaire Ray Kurzweil—that by 2029 we will to be the generation that’s the day that all these “data”
have the science and technology to live for- alive that is going to see all (including Ray’s own fading
ever—is unlikely to be fulfilled. this unfold.” Missler seems to be saying that memories) can be reconfigured into an arti-
Barry Ptolemy’s Transcendent Man is a Kurzweil is right about the second coming ficial intelligence simulacrum, thus reunit-
beautifully crafted and artfully edited docu- but wrong about what it is that is coming. ing father and son. Through heavy sighs and
mentary about Kurzweil and his quest to save Another religiously based admonition comes wistful looks, Kurzweil comes off not as a
humanity. If you enjoy contemplating the big from the Stanford University neuroscientist proselytizer on a mission but as a man tor-
questions in life from a scientific perspective, William Huribut, who identifies himself as a mented. It is, in fact, the film’s leitmotif. In
“practicing Christian.” He believes in one scene, Kurzweil wipes away a tear at his
immortality but not in the way Kurz- father’s grave site, in another he pauses over
weil envisions it and pronounces: photographs and looks longingly at memen-
“Death is conquered spiritually.” tos, and in yet another he recalls when his
From the science side, Neil Gersh- father, just days before his death, “uncharac-
enfeld, director of the Massachusetts teristically” phoned him, as if he’d had a pre-
Institute of Technology’s Center for monition. Although Kurzweil says he is opti-
Bits and Atoms, sagely notes: “What mistic and cheery about life, he can’t seem
Ray does consistently is to take a to stop talking about death: “It’s such a pro-
whole bunch of steps that everybody foundly sad, lonely feeling that I really can’t
agrees on and take principles for bear it,” he admits. “So I go back to thinking
extrapolating that everybody agrees about how I’m not going to die.” One won-
on and show they lead to things that ders how much of life he is missing by over-
nobody agrees on.” Likewise, the thinking death and how burdensome it must
futurist Kevin Kelly, who has painted surely be to imbibe over 200 supplement
a much more realistic portrait of what tablets a day and have your blood tested and
you will love this film. Accompanied by the our futures may (or may not) hold (1), com- cleansed every couple of months, all in an
eerily haunting music of Philip Glass (who, ments that “the precursors of those technolo- effort to reprogram the body’s biochemistry.
appropriately enough, also scored Errol Mor- gies that would have to exist simply are not There is something almost religious about
ris’s film The Fog of War—about another here.” Although he find’s Kurzweil’s expecta- Kurzweil’s scientism. He notes similarities
bigger-than-life character who thought he tion “heartwarming,” he predicts that “it isn’t between his goals and those of the world’s
could mold the world through data-driven going to happen.” While Kelly agrees that religions: “the idea of a profound transforma-
decisions, Robert McNamara), Transcen- Kurzweil’s exponential growth curves are tion in the future, eternal life, bringing back
CREDIT: RAY KURZWEIL/COURTESY TRANSCENDENT MAN
dent Man pulls viewers in through Kurzweil’s accurate, he holds that the conclusions and the dead.” Although the film never discloses
vision of a future in which we merge with especially the inspiration drawn from them his religious beliefs (he was raised by Jewish
our machines and vastly extend our longev- are not. He identifies Kurzweil as “a modern- parents as a Unitarian Universalist), in a (pre-
ity and intelligence to the point where even day prophet” for whom “nothing can waiver sumably) unintentionally humorous moment
death will be defeated. That point is Kurz- his absolutely certainty.” that ends the film, Kurzweil reflects on the
weil’s “singularity,” and he arrives at the 2029 The film is clearly intended as an uplifting god question and answers it himself: “Does
date by extrapolating curves based on what celebration of all the ways science and tech- God exist? I would say, ‘Not yet.’” Cheeky.
nology have enriched and are going to enrich
our lives. I don’t know if it is the music, the References
The reviewer, the author of The Mind of the Market, is at 1. K. Kelly, What Technology Wants (Viking, New York,
Claremont Graduate University and Skeptic magazine,
cinematography, or the subject himself, but 2010).
Post Office Box 338, Altadena, CA 91001, USA. E-mail: I found Transcendent Man to be a sad film
mshermer@skeptic.com about a genius who has been in agony since 10.1126/science.1205601
WorldMags
40 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
POLICYFORUM
CONSERVATION
W
hite-nose syndrome (WNS) and At the same time, bats of several migra- Economic Impact
the increased development of tory tree-dwelling species are being killed Although much of the public and some
wind-power facilities are threaten- in unprecedented numbers at wind turbines policy-makers may view the precipitous
ing populations of insectivorous bats in North across the continent (6, 7). Why these spe- decline of bats in North America as only
America. Bats are voracious predators of noc- cies are particularly susceptible to wind tur- of academic interest, the economic conse-
turnal insects, including many crop and forest bines remains a mystery, and several types quences of losing so many bats could be
pests. We present here analyses suggesting of attraction have been hypothesized (6). substantial. For example, a single colony
that loss of bats in North America could lead There are no continental-scale monitor- of 150 big brown bats (Eptesicus fuscus)
to agricultural losses estimated at more than ing programs for assessing wildlife fatali- in Indiana has been estimated to eat nearly
$3.7 billion/year. Urgent efforts are needed to ties at wind turbines, so the number of bats 1.3 million pest insects each year, possibly
educate the public and policy-makers about killed across the entire United States is dif- contributing to the disruption of popula-
the ecological and economic importance of ficult to assess. However, by 2020 an esti- tion cycles of agricultural pests (8). Other
insectivorous bats and to provide practical mated 33,000 to 111,000 bats will be killed estimates suggest that a single little brown
conservation solutions. annually by wind turbines in the Mid-Atlan- bat can consume 4 to 8 g of insects each
tic Highlands alone (7). Obviously, mor- night during the active season (9, 10), and
Infectious Disease and Wind Turbines tality from these two factors is substantial when extrapolated to the one million bats
Insectivorous bats suppress populations of and will likely have long-term cumulative estimated to have died from WNS, between
nocturnal insects (1, 2), but bats in North impacts on both aquatic and terrestrial eco- 660 and 1320 metric tons of insects are no
America are under severe pressure from systems (5, 7). Because of these combined longer being consumed each year in WNS-
two major new threats. WNS is an emerg- threats, sudden and simultaneous population affected areas (11).
ing infectious disease affecting populations declines are being witnessed in assemblages Estimating the economic importance of
of hibernating cave-dwelling bats through- of temperate-zone insectivorous bats on a bats in agricultural systems is challenging,
out eastern North America (3). WNS is likely scale rivaled by few recorded events affect- but published estimates of the value of pest
caused by a newly discovered fungus (Geomy- ing mammals. suppression services provided by bats ranges
ces destructans). This fungus infects
the skin of bats while they hibernate
and is thought to trigger fatal altera-
tions in behavior and/or physiology
(e.g., premature depletion of energy
reserves) (3, 4). Since February 2006,
when WNS was first observed on bats
in upstate New York, G. destructans
has spread west of the Appalachian
Mountains and into Canada. To date,
over one million bats have probably
died, and winter colony declines in
the most affected region exceed 70%
(5). Populations of at least one spe-
cies (little brown bat, Myotis lucifu-
gus) have declined so precipitously
that regional extirpation and extinc-
tion are expected (5).
1
Department of Zoology and Entomology, Uni-
versity of Pretoria, Pretoria 0002, South Africa.
2
U.S. Geological Survey, Fort Collins Science
Center, Fort Collins, CO 80526, USA. 3Depart- 0–1020 3400–4800 8700–11000 17000–20000 29000–36000
ment of Ecology and Evolutionary Biology, Uni-
1020–2100 4800–6600 11000–14000 20000–24000 36000–50000
versity of Tennessee, Knoxville, TN 37996, USA.
4
Center for Ecology and Conservation Biology, 2100–3400 6600–8700 14000–17000 24000–29000 50000–73000
Department of Biology, Boston University, Bos-
ton, MA 02215, USA. The worth of insectivorous bats. Estimated annual value of insectivorous bats in the agricultural industry at the
*Author for correspondence. E-mail: jgboyles@ county level. Values (×$1000 per county) assume bats have an avoided-cost value of ~$74/acre of cropland (12).
zoology.up.ac.za (See SOM for details.)
from about $12 to $173/acre (with a most wind turbines continues unabated, we can of new threats and at assessing their economic
likely scenario of $74/acre) in a cotton-dom- expect noticeable economic losses to North and ecological importance. We as scientists
inated agricultural landscape in south-central American agriculture in the next 4 to 5 years. should also make concerted efforts to develop
Texas (12). Here, we extrapolate these esti- and use more effective methods for educating
mates to the entire United States as a first Policy the public and policy-makers about the eco-
assessment of how much the disappearance A recently stated goal of the United Nations system services provided by bats.
of bats could cost the agricultural industry Environment Programme is to demonstrate Bats are among the most overlooked, yet
[see supporting online material (SOM)]. the value of biodiversity to policy-makers economically important, nondomesticated
Assuming values obtained from the cot- and the public (17). In keeping with this goal, animals in North America, and their conser-
ton-dominated agroecosystem in Texas, and we hope that the scale of our estimates and vation is important for the integrity of ecosys-
the number of acres of harvested cropland the importance of addressing this issue will tems and in the best interest of both national
across the continental United States in 2007 resonate both with the general public and and international economies. In our opin-
(13), we estimate the value of bats to the agri- policy-makers. Bats provide substantial eco- ion, solutions that will reduce the popula-
cultural industry is roughly $22.9 billion/ system services worldwide, and their benefits tion impacts of WNS and reduce the mortal-
year. If we assume values at the extremes of to human economies are not limited to North ity from wind-energy facilities are possible in
the probable range (12), the value of bats may America. For example, pioneering research the next few years, but identifying, substan-
be as low as $3.7 billion/year and as high as in tropical ecosystems shows the impor- tiating, and applying solutions will only be
$53 billion/year. These estimates include the tance of plant-visiting bats in the pollination fueled in a substantive manner by increased
reduced costs of pesticide applications that are of valuable fruit crops (18, 19). Although the and widespread awareness of the benefits of
not needed to suppress the insects consumed economic impacts of mass mortality of bats insectivorous bats among the public, policy-
by bats (12). However, they do not include associated with WNS appear to be confined, makers, and scientists.
the “downstream” impacts of pesticides on at present, to North America, wind turbines
ecosystems, which can be substantial (14), or are also causing bat fatalities in Europe (20), References
1. M. B. Kalka, A. R. Smith, E. K. V. Kalko, Science 320,
other secondary effects of predation, such as and the potential for WNS to spread to other 71 (2008).
reducing the potential for evolved resistance parts of the world is unknown. 2. K. Williams-Guillén, I. Perfecto, J. Vandermeer, Science
of insects to pesticides and genetically modi- We suggest that a wait-and-see approach 320, 70 (2008).
fied crops (15). Moreover, bats can exert top- to the issue of widespread declines of bat pop- 3. D. S. Blehert et al., Science 323, 227 (2009).
4. P. M. Cryan, C. U. Meteyer, J. G. Boyles, D. S. Blehert,
down suppression of forest insects (1, 2), but ulations is not an option because the life his- BMC Biol. 8, 135 (2010).
our estimated values do not include the ben- tories of these flying, nocturnal mammals— 5. W. F. Frick et al., Science 329, 679 (2010).
efit of bats that suppress insects in forest eco- characterized by long generation times and 6. P. M. Cryan, R. M. R. Barclay, J. Mammal. 90, 1330 (2009).
7. T. H. Kunz et al., Front. Ecol. Environ 5, 315 (2007).
systems because economic data on pest-con- low reproductive rates—mean that population 8. J. O. Whitaker, Jr., Am. Midl. Nat. 134, 346 (1995).
trol services provided by bats in forests are recovery is unlikely for decades or even centu- 9. E. L. P. Anthony, T. H. Kunz, Ecology 58, 775 (1977).
lacking. Even if our estimates are halved or ries, if at all. Currently, there are no adequately 10. A. Kurta, G. P. Bell, K. A. Nagy, T. H. Kunz, Physiol. Zool.
62, 804 (1989).
quartered, they clearly show how bats have validated or generally applicable methods for
11. J. G. Boyles, C. K. R. Willis, Front. Ecol. Environ 8, 92
enormous potential to influence the econom- substantially reducing the impacts of WNS (2010).
ics of agriculture and forestry. or wind turbines on bat populations. To date, 12. C. J. Cleveland et al., Front. Ecol. Environ 4, 238 (2006).
Although adverse impacts of WNS on bat management actions to restrict the spread of 13. USDA, 2007 Census of Agriculture: United States
Summary and State Data, vol. 1, Geographic Area Series
populations have occurred relatively rapidly, WNS have been directed primarily toward (AC-07-A-51, USDA, Washington, DC, 2009).
impacts of wind energy development appear limiting anthropogenic spread (e.g., cave and 14. D. Pimentel, in Integrated Pest Management: Innovation-
to pose a more chronic, long-term concern. mine closures and fungal decontamination Development Process, R. Peshin and A. K. Dhawan, Eds.
(Springer Media, Houten, Netherlands, 2009),
WNS has caused rapid and massive declines protocols) (21). Other proactive solutions for pp. 89–111.
of hibernating bats in the northeastern United understanding and ameliorating the effects of 15. P. Federico et al., Ecol. Appl. 18, 826 (2008).
States, where this disease has persisted for at WNS include developing improved diagnos- 16. D. L. Elliot, C. G. Holladay, W. R. Barchet, H. P. Foote,
least 4 years (5). Thus, the coming growing tics to detect early-stage infections and fun- W. F. Sandusky, Wind Energy Resource Atlas of the United
States (Solar Energy Research Institute, U.S. Department
season may be the first in which the adverse gal distribution in the environment; defining of Energy, Golden, CO, 1986).
effects of this disease will become notice- disease mechanisms; investigating the poten- 17. The Economics of Ecosystems and Biodiversity,
able. Because of regional differences in crop tial for biological or chemical control of the www.teebweb.org/.
18. S. Bumrungsri, E. Sripaoraya, T. Chongsiri, K. Sridith,
production, the agricultural value of bats in fungus; and increasing disease resistance P. A. Racey, J. Trop. Ecol. 25, 85 (2009).
the U.S. Northeast may be comparatively through habitat modification, such as creation 19. S. Bumrungsri et al., J. Trop. Ecol. 24, 467 (2008).
small relative to much of the United States of artificial or modified hibernacula that are 20. J. Rydell et al., Acta Chiropt. 12, 261 (2010).
21. U.S. Fish and Wildlife Service, www.fws.gov/
(see the figure) (SOM). However, evidence less conducive to disease development and
whitenosesyndrome/.
of the fungus associated with WNS was transmission (11, 22). Other approaches, such 22. J. Foley, D. Clifford, K. Castle, P. Cryan, R. S. Ostfeld,
recently detected in the Midwest and Great as culling of infected bats have been widely Conserv. Biol. 25, 223 (2011).
Plains, where the estimates of the value of discussed and dismissed as viable options 23. T. G. Hallam, G. F. McCracken, Conserv. Biol. 25, 189
(2011).
bats to agriculture are substantial (see the for control (23). New research also shows 24. E. F. Baerwald, J. Edworthy, M. Holder, R. M. R. Barclay,
figure). Additionally, because this region has that altering wind turbine operations dur- J. Wildl. Manage. 73, 1077 (2009).
the highest onshore wind capacity in North ing high-risk periods for bats significantly 25. E. Arnett et al., Front. Ecol. Environ 16, (2010).
10.1890/100103
America, increased development of wind reduces fatalities (24, 25). Specific action
energy facilities and associated bat fatalities on these issues will benefit from scientific Supporting Online Material
in this region can be expected (16). Thus, if research carefully aimed at providing practi- www.sciencemag.org/cgi/content/full/332/6025/41/DC1
mortality of bats associated with WNS and cal conservation solutions for bats in the face 10.1126/science.1201366
WorldMags
42 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
PERSPECTIVES
IMMUNOLOGY
Hosts may modulate their immune response
by measuring a combination of signals from
Danger, Microbes, and Homeostasis pathogens and damaged tissue.
T
he immune system is conventionally ria, which have enormous importance to the In addition to displaying MAMPs, true
viewed as a means to fight infection. It health and physiology of the host (4), main- pathogens stimulate the release of danger
has become clear, however, that what tained? Studies in insect model systems sug- signals by damaging host cells or secreting
is considered the “immune” system has also gest that the joint presence of both MAMPs molecules that interfere with host biology.
evolved to maintain homeostasis and regulate and danger signals may be required to This combination of MAMPs and danger
commensal microbes that normally inhabit launch a true defense response (5) and that signals can override the homeostatic nega-
the body. Such varied functions demand insects have mechanisms for disregarding tive regulation of the insect immune system
nuanced and context-appropriate control MAMPs presented in the absence of patho- in tissues like the gut, resulting in a full-
of immune responses. The thoughts on how logical damage to the host. blown defense response that includes high
immunity becomes activated include two The animal gut is constantly exposed expression of antibiotic proteins and bio-
views: by recognition of “nonself ” molecules to potentially pathogenic bacteria that are chemicals (11–13). Interestingly, the lower
of infectious agents (1) or by recognition of ingested along with food. Yet, the gut is level of defense activity triggered even
“danger” signals—host molecules released also the most important compartment of by commensals stimulates gut stem cell
by damaged host cells (2). Empirical evidence immune-modulated regulation of beneficial activity and epithelial renewal ( 13),
supports both models, but also reveals their microbial communities that aid in digestion providing an unexpected mechanism by
limits. Insights from recent studies on insect and nutritional assimilation (4). Beneficial which hosts and microbes interact to effect
immune systems, which are generalizable to microbes in both vertebrate and insect guts host homeostasis.
vertebrates, suggest that the
two models may be compat-
ible. That is, a host determines Challenge Elicitors Host Host homeostasis
the balance of nonself elicitors
and danger signals to decide
when to activate the immune Wound Wound repair
Danger signals
system against pathogenic Reads the balance of
Pathogen (host) signals to mount Controls/
infection while also maintain- eliminates infection
appropriate response
ing healthy relationships with Symbiont MAMP signals
commensals. (microbe) Maintains symbionts
Bacterial associations
with their hosts can be ben-
eficial, damaging, or benign,
depending on the context Elicitor ratio. Wounding, pathogen infection, and symbionts challenge the homeostasis of the host. A sterile wound generates
and the identity of play- exclusively danger signals, whereas symbionts display MAMPs without causing tissue damage that stimulates danger signals.
ers. It is generally believed Pathogens both display MAMPs and trigger danger signals, stimulating a robust immune response. The nature and strength of
that insects recognize bac- immune defense and homeostasis may be determined by the balance of danger and MAMP signals, combining the core tenets of
teria through the presence the danger and infectious nonself models.
of conserved molecules in
the prokaryotic cell wall called “microbe- display MAMPs that are recognized by the The reliance on the combination of
associated molecular patterns” (MAMPs). immune system, yet immune activity is mod- danger signals and MAMPS to stimulate
During infection, these molecules are rec- ulated such that the microbial community is immune reactions is not restricted to gut tis-
ognized by pattern recognition receptors actively regulated but not eliminated (6, 7). sues, but is a general property of defense
(PRRs) expressed by host cells, thereby trig- Studies in the fruit fly Drosophila melano- activation. In the waxmoth Galleria mel-
gering immune system activity and micro- gaster have found that some MAMPs (pepti- lonella, systemic bacterial and fungal infec-
bial elimination (1, 3). The insect MAMP- doglycan molecules) that are shed by bacte- tion results in damage to host cells and the
PRR model is analogous to the distinction ria in the gut induce expression of host pro- release of collagen fragments and nucleic
between self- and nonself molecules by the teins that degrade these MAMPs to a nonim- acids that synergize with MAMPs to stimu-
vertebrate immune system. But this concept munostimulatory form (6, 8). This negative- late an immune response (14). Extracellular
of immunity poses a puzzle: If the immune feedback loop dampens defense activity and collagen and nucleic acids are also danger
system is hardwired to readily recognize allows the host to regulate commensal abun- signals in vertebrates (15, 16). The expres-
and kill bacteria, how are symbiotic bacte- dance without entirely eliminating the sym- sion of genes that encode antimicrobial
bionts. Similar scenarios of the host inhib- peptides is induced by sterile wounding in
iting its defense response against mutualist insects, although this expression is transient
1
Department of Entomology, Cornell University, Ithaca, NY symbionts have been described in bacteri- in the absence of MAMPs (17).
2
14853, USA. Department of Animal and Plant Sciences,
University of Sheffield, Sheffield S10 2TN, UK. E-mail: jor@ omes, specialized organs where insects har- The use of danger signals in combina-
sheffield.ac.uk bor mutualistic bacteria (9, 10). tion with MAMPs may stem partly from an
economical approach to defense. In infec- themselves a sufficient cue for optimal reg- Sjöberg, E. Amir, P. Teggatz, M. Barman, M. Hayward,
tions, the damage caused by pathogenicity ulation of host immunity, but together they D. Eastwood, M. Stoel, Y. Zhou, E. Sodergren, G. M.
Weinstock, C. B. Williams, N. A. Bos, Nat. Immunol.
must be offset against the costs of deploying constitute a reliable indicator for modu- 11, 76 (2010).
an immune response (18). Rather than striv- lating the immune response to yield both 8. A. Zaidman-Rémy, M. Hervé, M. Poidevin, S. Pili-Floury,
ing to completely eliminate infections, the effective defense and homeostatic regula- M. S. Kin, D. Blanot, B. H. Oh, R. Ueda, D. Mengin-
immune system might manage a persistent tion of commensal microbial communities Lecreulx, B. Lemaitre, Immunity 24, 463 (2006).
9. C. Anselme, V. Pérez-Brocal, A. Vallier, C. Vincent-
infection at a low and nondamaging level (see the figure). In this scenario, the two Monegat, D. Charif, A. Latorre, A. Moya, A. Heddi,
(19). This is analogous to the concept of models of immune activation (1, 2) as trig- BMC Biol. 6, 43 (2008).
“economic injury level” in agricultural pest gered by nonself versus by danger signals 10. J. Wang, Y. Wu, G. Yang, S. Aksoy, Proc. Natl. Acad. Sci.
U.S.A. 106, 12133 (2009).
control, whereby pests are not eradicated need not be considered mutually exclusive,
11. P. Liehl, M. Blight, N. Vodovar, F. Boccard, B. Lemaitre,
but are suppressed to a threshold where the but could be merged into a single model PLoS Pathog. 2, e56 (2006).
cost of pest-driven damage is lower than the where the host reads the balance of sig- 12. E.-M. Ha, C.-T. Oh, Y. S. Bae, W.-J. Lee, Science 310, 847
cost of further control. MAMPs indicate the nals to mount an appropriate immunologi- (2005).
13. N. Buchon, N. A. Broderick, M. Poidevin, S. Pradervand,
presence of microbes, but if the microbes cal reaction.This measuring of signals may B. Lemaitre, Cell Host Microbe 5, 200 (2009).
are doing little or no damage to the host, allow the host to effectively fight an infec- 14. A. Vilcinskas, Virulence 1, 206 (2010).
the cost of immune activity may exceed the tion, while maintaining healthy relation- 15. R. Lande, J. Gregorio, V. Facchinetti, B. Chatterjee,
benefit of clearing the infection. The pre- ships with commensals. Y. H. Wang, B. Homey, W. Cao, Y. H. Wang, B. Su, F. O.
Nestle, T. Zal, I. Mellman, J. M. Schröder, Y. J. Liu,
sentation of damage-triggered danger sig- M. Gilliet, Nature 449, 564 (2007).
References and Notes
nals in conjunction with MAMPs, however, 1. R. Medzhitov, C. A. Janeway Jr., Science 296, 298 (2002). 16. S. Gambaryan, A. Kobsar, N. Rukoyatkina, S. Herterich,
indicates a severe infection that justifies the 2. P. Matzinger, Science 296, 301 (2002). S. Geiger, A. Smolenski, S. M. Lohmann, U. Walter,
expense of a defense response. 3. E. Ragan, C. An, H. Jiang, M. Kanost, in Insect Infection J. Biol. Chem. 285,18352 (2010).
and Immunity, J. Rolff, S. Reynolds, Eds. (Oxford Univ. 17. B. Lemaitre, J. M. Reichhart, J. A. Hoffmann, Proc. Natl.
The immune system cannot afford to Acad. Sci. U.S.A. 94, 14614 (1997).
Press, Oxford, 2009), pp. 34–48.
be rampantly stimulated by benign foreign 4. R. J. Dillon, V. M. Dillon, Annu. Rev. Entomol. 49, 71 18. B. P. Lazzaro, T. J. Little, Philos. Trans. R. Soc. Lond. B
molecules, but needs to determine whether (2004). Biol. Sci. 364, 15 (2009).
19. E. R. Haine, Y. Moret, M. T. Siva-Jothy, J. Rolff, Science
a signal indicates microbial nonself or dan- 5. R. E. Vance, R. R. Isberg, D. A. Portnoy, Cell Host Microbe
6, 10 (2009). 322, 1257 (2008).
ger. Insights from insect immunity point to 20. We thank O. Otti, A. Dobson, and S. Reynolds for
6. J. H. Ryu, S. H. Kim, H. Y. Lee, J. Y. Bai, Y. D. Nam, J. W.
the possibility that both types of elicitors Bae, D. G. Kee, S. C. Shin, E. M. Ha, W. J. Lee, Science comments on the manuscript.
may be important in combination. Perhaps 319, 777 (2008).
neither MAMPs nor danger signals are by 7. N. H. Salzman, K. Hung, D. Haribhai, H. Chu, J. Karlsson- 10.1126/science.1200486
CELL BIOLOGY
I
n cells, various signaling pathways help ing or by attenuating new protein synthesis. for manipulating stress-signaling cascades
to maintain proteostasis—the proper The propagation of stress-response signal- through direct targeting of a property that
concentrations, folding, and function ing is often mediated by phosphorylation, emerges from these complex signaling cas-
of proteins. When a cell is under stress, or the addition of a phosphate group to the cades (an emergent property), allowing for
upstream “stress sensors” within these stress sensor and/or downstream signaling specific manipulation of stress signaling that
pathways are activated, initiating a signal- components. Because of the central impor- is independent of pathways involved in gen-
ing cascade that minimizes the misfold- tance of stress signaling pathways in main- eral cellular homeostasis.
ing and aggregation of proteins, which can taining the integrity of the cellular pro- One of the best-characterized stress-
lead to disease (1–3). Stress sensors often teome, manipulating these pathways has responsive signaling pathways is called the
respond to the accumulation of misfolded become an attractive strategy for preventing unfolded protein response. It maintains pro-
proteins within specific cell compartments the protein misfolding linked to numerous teostasis in the ER, where the secreted pro-
by activating the transcription of proteo- human diseases (4, 5). teome is folded (1, 7). The unfolded protein
stasis components, such as enzymes and On page 91 of this issue, Tsaytler et al. response comprises integrated signaling
“chaperone” proteins that assist with fold- take a step toward this goal. They demon- pathways that emanate from three trans-
strate that the selective inhibition of a stress- membrane stress sensors localized in the
1
Department of Molecular and Experimental Medicine, induced phosphatase complex involved in ER: IRE1, ATF6, and PERK. These sen-
Scripps Research Institute, La Jolla, CA 92037, USA. a stress-signaling pathway that controls sors are activated by the accumulation of
2
Department of Chemistry, Scripps Research Institute, La proteostasis in the endoplasmic reticulum misfolded proteins within the ER lumen.
Jolla, CA 92037, USA. 3Skaggs Institute for Chemical Biol-
ogy, Scripps Research Institute, La Jolla, CA 92037, USA. (ER) increases cellular survival (6). This Activation of IRE1 and ATF6 enhances pro-
E-mail: wiseman@scripps.edu; jkelly@scripps.edu novel approach demonstrates the potential tein folding capacity within the ER lumen
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IMMUNOLOGY
I
nsight into the functional role of a par- C. albicans
ticular component of the immune sys- infection
tem, such as a cell type, cytokine, or Innate immune Adaptive immune
constituent of a signaling pathway, can be response response
gleaned from diverse human genetic muta-
tions that have naturally occurred in criti-
cal immune system processes. For example, Cytokines, chemokines
immune dysregulation polyendocrinopathy antimicrobial peptides Mucosal
enteropathy X-linked syndrome is an auto- epithelium
immune disease that was determined to be
secondary to dysregulation of a subset of
regulatory immune cells (CD4 subset of T
cells) caused by mutations in the FOXP3
gene. This discovery identified the tran- Natural killer cells
Macrophages IL-17A TH17 cells
scription factor FOXP3 in controlling nor- (CCR6, CCR4)
Monocytes IL-17F
mal immune responses and raised the issue
of defects in regulatory T cells in more com- Keratinocytes
mon human autoimmune disorders (1). On Proinflammatory
page 65 of this issue, Puel et al. (2) report Dendritic cells cytokines, chemokines, T cells (CD8)
tracing an abnormal immune response to T cells (γδ) costimulatory signals, T cells (γδ)
infection with the common fungus Candida antigen presentation
Neutrophils Eosinophils
albicans to mutations in components of a Proinflammatory
signaling pathway involving the cytokine cytokines, chemokines
interleukin-17 (IL-17).
Candida is a genus of commensal fungi Handling Candida. Upon infection with the fungus C. albicans, innate immune cells instruct the adaptive arm
found in the normal flora of the skin and of the human immune response to secrete IL-17, which acts on different cells that are essential for protection
mucosal surfaces of healthy individuals. Fun- against Candida.
gal infections (called candidiasis) with short-
lived symptoms of oral thrush or vaginitis, (5)] or hyper-immunoglobulin E syndrome tion against the infection (8). By contrast, in
though unpleasant, are not life-threatening. [caused by mutations in the gene encoding the chronic mucocutaneous candidiasis, cells of
However, in some individuals, Candida spp. transcription factor signal transducer and acti- the adaptive immune system mediate pro-
(C. albicans primarily) cause a persistent vator of transcription 3 (STAT3) (6)]. But Can- tection (9). The immune response against
infection either by infecting mucosal and epi- dida infection is also found as an isolated syn- Candida had long been thought to be driven
dermal surfaces (mucocutaneous candidiasis) drome in the absence of other severe infections primarily by T helper 1 (TH1) cells, because
or by disseminating in the blood (systemic or autoimmune disorders. In this case, called patients with chronic mucocutaneous candi-
candidiasis). Mucocutaneous candidiasis is chronic mucocutaneous candidiasis disease, diasis produced lower amounts of type 1 cyto-
typically a chronic syndrome, whereas sys- the underlying etiology is unknown (7). Puel kines, which are produced by TH1 cells (3)
temic candidiasis is acute. Chronic muco- et al. describe two genetic etiologies of this [such as interferon-γ (IFN-γ)], specifically in
cutaneous candidiasis is a clinically highly syndrome: an autosomal dominant mutation response to Candida spp. (10). More recently,
heterogeneous infection, as it is usually asso- in the gene encoding IL-17F, resulting in a with the discovery of the TH17 cell lineage,
ciated with other severe infections, particu- deficiency in this cytokine; and an autosomal studies in mice (11, 12) and humans (13)
larly in patients with acquired or inherited recessive mutation in the gene encoding inter- have revealed an important protective role for
T cell immunodeficiencies [such as HIV (3) leukin-17 receptor A (IL-17RA), resulting in TH17 cells in Candida infections. TH17 cells
and severe combined immunodeficiency (4)] a deficiency in this receptor for the cytokine. are a subset of T helper cells that secrete the
and/or autoimmune disorders. In a number These mutations clearly implicate the IL-17 cytokines IL-17A, IL-17F, IL-22, and IL-21,
of these cases, genetic alterations have been immune pathway in this disease. and are important for the host defense against
described in patients, such as in autoimmune Chronic mucocutaneous candidiasis dis- organisms at the mucosal barriers (14, 15).
CREDIT: Y. HAMMOND/SCIENCE
polyendocrine syndrome type 1 (caused by ease is characterized by infections of the With Candida infection, cells from the
mutations in the gene encoding the transcrip- nails, skin, and oral and reproductive muco- innate immune system can inhibit the infec-
tion factor autoimmune regulator (AIRE) sae in patients infected with C. albicans but tion directly themselves through antifun-
who have no signs of other infections or auto- gal activities (including secretion of antimi-
immune disorders. In systemic candidiasis, crobial peptides and engulfing microbes by
Department of Neurology and Immunobiology, Yale School
of Medicine, New Haven, CT 06520, USA. E-mail: david. cells of the innate immune system, particu- phagocytosis) (see the figure). These cells
hafler@yale.edu larly neutrophils, are essential for protec- also produce proinflammatory cytokines and
chemokines, and provide costimulatory and mononuclear cells. This mutation caused compared to healthy individuals. However,
antigen processing and presentation signals fibroblasts and leukocytes isolated from this it is unknown whether afferent defects in
to instruct the adaptive immune response patient to be unresponsive to IL-17A and IL- immune responses to Candida mediated by
cells to secrete IL-17. These IL-17–produc- 17F (homo- or heterodimers). In the second defects in IL-17A and IL-17F production by
ing cells are predominantly TH17 cells, but case report, the authors found a missense T cells, or loss of the efferent effects of IL-17
there are other cells from both the innate and mutation in IL17F gene in a multiplex fam- on mucosal and epithelial surfaces, underlie
adaptive immune system [(T cells (γδ), nat- ily with autosomal dominant inheritance of the chronic mucocutaneous fungal infection.
ural killer cells, neutrophils, T cells (CD8 chronic mucocutaneous candidiasis. This Although thrush and vaginitis occur in
subtype), and eosinophils] that also produce mutation was located in the cavity of the cyto- only a subset of the population, the findings
IL-17. Moreover, TH17 cells secrete several kine, a region implicated in receptor binding. of Puel et al. suggest that allelic variations in
chemokines (CXCL1, CXCL5, and IL-8) that Cytokines that were genetically engineered to key components of the IL-17 signaling path-
in turn act on cells of the innate immune sys- express the mutated form of the cytokine (in ways may predispose to common candidia-
tem, stimulating their migration to the site of the context of either an IL-17F homodimer or sis infection. Nevertheless, these data clearly
infection. IL-17 stimulates mucosal epithelial IL-17A–IL-17F heterodimer) did not bind to link evolution of the IL-17 pathway with host
cells to secrete proinflammatory cytokines, IL-17RA on fibroblasts. These mutant cyto- responses to Candida.
chemokines, and antimicrobial peptides. kines also altered the stimulation of cytokine
References
Puel et al. describe two case reports with secretion by peripheral blood mononuclear 1. V. Viglietta, C. Baecher-Allan, H. L. Weiner, D. A. Hafler,
two different genetic etiologies for these cells, suggesting that the mutation caused a J. Exp. Med. 199, 971 (2004).
chronic Candida infections. In one case, a partial loss of IL17F gene function. 2. A. Puel et al., Science 332, 65 (2011); 10.1126/
science.1200439.
child diagnosed with chronic mucocutane- The discovery of genetic defects in 3. L. de Repentigny, D. Lewandowski, P. Jolicoeur, Clin.
ous candidiasis had an autosomal recessive chronic mucocutaneous candidiasis that are Microbiol. Rev. 17, 729 (2004).
mutation in the gene encoding IL-17RA. related to TH17 cells supports previous data 4. C. Antachopoulos, Clin. Microbiol. Infect. 16, 1335 (2010).
5. J. Aaltonen et al., Nat. Genet. 17, 399 (1997).
This receptor binds both IL-17A and IL-17F, from mouse models and humans suggesting 6. Y. Minegishi et al., Nature 448, 1058 (2007).
and is expressed in multiple tissues, such as the importance of this cell type for protection 7. K. Eyerich, S. Eyerich, J. Hiller, H. Behrendt, C. Traidl-
vascular endothelial cells, peripheral T cells, against Candida infections. It further indi- Hoffmann, Eur. J. Dermatol. 20, 260 (2010).
8. L. Romani et al., Res. Immunol. 147, 512 (1996).
B cells, fibroblasts, lung, myelomonocytic cates that other genetic etiologies related to 9. H. R. Conti, S. L. Gaffen, Microbes Infect. 12, 518 (2010).
cells, and bone marrow stromal cells. The this lineage could underly chronic mucocu- 10. D. De Moraes-Vasconcelos et al., Clin. Exp. Immunol. 123,
authors sequenced genes encoding the key taneous candidiasis in other subjects, open- 247 (2001).
11. H. R. Conti et al., J. Exp. Med. 206, 299 (2009).
cytokines produced by TH17 cells from this ing an important field for developing thera- 12. L. Lin et al., PLoS Pathog. 5, e1000703 (2009).
patient (IL-22, IL-17A, and IL-17F) and their peutic strategies that target TH17 cells in these 13. K. Eyerich et al., J. Invest. Dermatol. 128, 2640 (2008).
corresponding receptors, and found a homo- patients. Puel et al. also demonstrate that the 14. S. J. Aujla et al., Semin. Immunol. 19, 377 (2007).
15. T. Korn, E. Bettelli, M. Oukka, V. K. Kuchroo, Annu. Rev.
zygotic nonsense mutation in the IL17RA percentage of total T cells (defined by CD3 Immunol. 27, 485 (2009).
gene that abrogated IL-17RA receptor expression) that secretes IL-17A was not
expression in fibroblasts and peripheral blood altered in the patients from both case reports 10.1126/science.1205311
MATERIALS SCIENCE
Y. Charles Cao
T
he semiconductor industry annually the fabrication of key transistor components tals. They present strong evidence that both
spends billions of dollars deliberately such as p-n junctions would not be possible n- and p-type nanocrystals were formed, as
adding atomic impurities, called dop- (1). Doping has had less impact on lower-cost well as insights into the electronic and opti-
ants, into very pure semiconductors. Dop- devices in which semiconductor nanocrys- cal effects of doping small nanocrystals (less
ants can make devices run faster by increas- tals may be used, such as solar cells, printable than 10 nm in diameter).
ing the number of negatively (n) or positively low-power devices, and light-emitting diodes The light emission and electronic struc-
(p) charged mobile carriers. They can also (2). Our knowledge of the doping effects on tures of a semiconductor nanocrystal can dif-
determine the predominant type of charge the electronic properties of semiconductor fer from those of bulk samples or thin films
carrier: electrons in n-type semiconductors, nanocrystals has been incomplete because of because of quantum confinement effects cre-
“holes” in p-type semiconductors (the dop- a lack of robust synthetic methods for dop- ated by its small size (4). These properties
ant atom accepts an electron, resulting in ing free-standing nanocrystals (as opposed have already led to applications; for example,
the formation of a “hole”). Without doping, to thin films of nanocrystals). On page 77 of colloidal semiconductor nanocrystals can be
this issue, Mocatta et al. (3) report a solution- used as fluorescent labels for the long-term
Department of Chemistry, University of Florida, Gainesville, phase synthesis of metallically doped, free- monitoring of biological pathways in living
FL 32611, USA. E-mail: cao@chem.ufl.edu standing indium arsenide (InAs) nanocrys- cells (5). It has been predicted that intentional
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PERSPECTIVES
RETROSPECTIVE
The creative vision of a civil engineer to turn
universities into driving forces of innovation
George Bugliarello (1927–2011) spawned new design concepts for inner-city
renewal, industrial parks, and sustainable cities.
Ilan Juran and John Falcocchio
G
eorge Bugliarello, a creative engi- United States. It grew into member of many science and
neer, outstanding researcher, and a workforce of more than engineering organizations
dedicated educator, died on 18 Feb- 20,000 employees in finan- including The American
ruary at age 83, in New York. His range of cial, utilities, and communi- Society of Civil Engineers,
interests and expertise transcended many cation sectors (including the the Biomedical Engineering
disciplines, including civil engineering, bio- as “911” emergency system Society, and the American
medical engineering, urban development, of New York City). Among Society for the Advancement
science policy, water resources, and envi- his key decisions was creat- of Science.
ronmental science. His vision of the role of ing the Center for Advanced George’s expertise was
science, innovation, and education, coupled Technology in Telecommu- also called upon on an inter-
with a passion for turning his vision into real- nications in 1982, which national level, where he
ity, is reflected in today’s urban communities, continues to receive funding advised groups on science
forged through academic and industry inter- from the state of New York policy and urban and eco-
actions in ways that spur economic growth in return for transferring nomic development. These
and societal well-being, while respecting the research in technologies to New York compa- included committees for the U.S. National
quality of human life and the environment. nies for new applications. He also created a Academy of Sciences (NAS), the North
George was born in Trieste, Italy, in Center for Technology and Financial Services Atlantic Treaty Organization (NATO), the
1927. After graduating from the Univer- at Poly in 1994, with teaching and research NSF, and the U.S. National Institutes of
sity of Padua in 1951, he went to the United functions and a strong focus on users of tech- Health. He advised the U.S. Department of
States and earned master’s and Ph.D. doctoral nology in the financial industry. This fostered State in Venezuela and Central Africa, held
degrees in civil engineering at the University the first American academic master’s degree a Senior Faculty Fellowship for NATO at
of Minnesota (1954) and the Massachusetts program in Financial Engineering. The suc- the Technical University of Berlin, was a
Institute of Technology (1959). His career cess of MetroTech became the catalyst that member of the U.S.–Egypt Joint Consulta-
path included a faculty position at Carnegie George believed would transform downtown tive Committee of the NAS, and was on the
Mellon University and dean of engineering at Brooklyn into the new vibrant place of today. Science for Peace Steering Committee of
the University of Illinois at Chicago (1969– He was honored by the Engineering News- NATO. George served as Foreign Secretary
1973), where he explored the seamless meld- Record as one of “Those Who Made Marks,” of the U.S. National Academy of Engineer-
ing of biology, society, and machines, and and in 1994 he was awarded the New York ing (NAE), was a lifetime National Asso-
coined the term “biosoma.” City Mayor’s Award for Excellence in Sci- ciate of the National Academies, and was
George came to the Polytechnic Institute of ence and Technology. chair of the NAE Council’s International
New York University (Poly) where he served George’s diverse research interests ranged Affairs Committee.
as president for 21 years (1973–1994). His from stochastic simulations of hydrodynam- George was an elite humanistic explorer,
vision of rescuing the then Polytechnic Insti- ics to sustainable megacities in emerging whose creative scientific work and educa-
tute of Brooklyn from deep financial trouble countries. His 60 years of scientific work is tional dedication was often inspired by a holis-
began with its merger with the engineering reflected in more than 300 professional pub- tic quest for understanding the universe of the
school of New York University. He realized lications. He also founded (and was coedi- complex and intertwined relationships among
that for Poly to grow, it needed to change the tor of ) the journal Technology in Society. His biological, societal, environmental, and tech-
poor physical and economic character of its awards are many and include the Walter L. nological systems. For him, engineering was
neighborhood. He converted this problem Huber Civil Engineering Research Prize of the art of creating technology and systems as
into an opportunity for Poly. By recognizing the American Society of Civil Engineers in the processes that human societies devise to
that cities have historically been the product 1967 and the 2009 Marconi Society’s Beacon modify or preserve nature for their sustainable
CREDIT: POLYTECHNIC INSTITUTE OF NEW YORK UNIVERSITY
of technology, George carved a path to revi- of Light Award. development, and the capability of their stra-
talize downtown Brooklyn and placed Poly in He served on numerous national boards tegic integration in the design of the metrop-
a leading role to guide its renaissance. Two and committees in the United States, includ- olis to address future societal needs. His fel-
years after his arrival, he proposed the devel- ing the Advisory Committee for Science and low faculty and academic community believe
opment of a technology park. His tenacity in Engineering Education of the National Sci- that his scientific legacy and academic vision
developing and marketing this idea finally ence Foundation (NSF), the Board on Infra- will have a great impact on the next genera-
paid off in 1989, when ground was broken structure and the Constructed Environment of tion of multidisciplinary engineers and nur-
for MetroTech, the first modern university- the National Research Council, the National ture a professional culture that will inherently
industry research and technology park in the Academies committee on Megacities, the recognize the integration of bioenvironmental
National Committee on Science Education risks, societal inspirations, and technological
Standards and Assessment, and the Lawrence innovation as key elements for the sustainable
Urban Infrastructure Institute & Urban Utility Center,
Polytechnic Institute of New York University, Brooklyn, NY Livermore National Laboratory Engineer- development of urban society.
11201, USA. E-mail: ijuran@poly.edu ing Advisory Committee. George was also a 10.1126/science.1205706
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Early Detection of
Parkinson’s Disease:
The Challenges and Potential
of New Biomarkers
WEBINAR
Wednesday, April 27, 2011
12 noon ET, 9 am PT,
4 pm GMT, 5 pm UK
Ten years or more before the classic tremors of During this Webinar our distinguished panelists will:
Parkinson’s disease (PD) appear, the destruction • Explain the need for biomarkers for detecting early
of dopaminergic neurons in the brain’s nigrostriatal PD and how these biomarkers can be used in drug
pathway is well underway. Identifying biological development and clinical trials
markers (biomarkers) of PD in its earliest stages will
• Provide an overview of promising new biological and
be crucial for early intervention with therapeutics
neuroimaging markers
to prevent or even reverse loss of dopaminergic
neurons. Biomarkers for early PD could be used • Discuss the challenges and bottlenecks in the develop-
to identify patients at risk for PD or in the earliest ment of new biomarkers for PD and the role of the
stages of the disease and to assess the efficacy of Parkinson’s Progression Markers Initiative (PPMI).
new drugs or therapies. Biomarkers could also be
used to select appropriate patients for clinical trials
and to monitor disease progression or drug-induced Moderator: Brought to you by
remission in real time. So far, only one biomarker Science/AAAS and Science
Todd Sherer, Ph.D. Translational Medicine,
for PD called DaTscan—SPECT imaging of dopamine The Michael J. Fox Foundation for in association with the
transporters at dopaminergic nerve terminals in the Parkinson’s Research, New York, NY Michael J. Fox Foundation.
nigrostriatal pathway—has been approved by the
Participants:
FDA. Given the number of patients with PD (~1 mil-
Kenneth Marek, M.D.
lion in the United States and ~5 million worldwide), Institute for Neurodegenerative
developing new biomarkers for detecting the earliest Disorders, New Haven, CT
stages of this disease is imperative if new drugs and Michael G. Schlossmacher,
treatments are to be developed. M.D., FRCPC
University of Ottawa, Ottawa, Ontario
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REVIEW
How Reliable Is the Current Generation
of Predictions?
Climate-change impacts on biodiversity, both
Beyond Predictions: Biodiversity positive and negative, are already manifest in
recent widespread shifts in species ranges and
Conservation in a Changing Climate phenological responses (6, 7). Although human
land use remains the main driver of present-day
species extinction and habitat loss (8), climate
Terence P. Dawson,1 Stephen T. Jackson,2 Joanna I. House,3 Iain Colin Prentice,3,4,5 Georgina M. Mace4,6* change is projected to become equally or more
important in the coming decades (9, 10). As-
Climate change is predicted to become a major threat to biodiversity in the 21st century, sessing the biodiversity consequences of climate
but accurate predictions and effective solutions have proved difficult to formulate. Alarming change is complicated by uncertainties about the
predictions have come from a rather narrow methodological base, but a new, integrated science degree, rate, and nature of projected climate change
of climate-change biodiversity assessment is emerging, based on multiple sources and (11), the likelihood of novel and disappearing
approaches. Drawing on evidence from paleoecological observations, recent phenological and climates (12), the diversity of individual-species
microevolutionary responses, experiments, and computational models, we review the insights that responses to a broad suite of interacting climate
different approaches bring to anticipating and managing the biodiversity consequences of variables (6), and interactions of climate-change
climate change, including the extent of species’ natural resilience. We introduce a framework effects with other biotic factors (e.g., competition,
that uses information from different sources to identify vulnerability and to support the design of trophic relationships) and stressors (land use, in-
conservation responses. Although much of the information reviewed is on species, our framework vasive species, pathogens, pollutants) (13, 14).
and conclusions are also applicable to ecosystems, habitats, ecological communities, and Syntheses of climate change and biodiversity
genetic diversity, whether terrestrial, marine, or fresh water. for decision-makers, conservation organizations,
and governments (1, 2, 15) have relied heavily
larming predictions about the potential experiments, and mechanistic (process) modeling on empirical niche (or climate-envelope) mod-
Direct observations
30
Summer
temp. (°C) 10
Winter temp. (°C)
5 -40
Integrated science of
climate-change
biodiversity assessment
Mechanistic
Experimental manipulations
Fig. 1. An integrated science of climate-change biodiversity assessment will between geographic patterns of species distributions and climate, and are best
draw from multiple sources and approaches. Each provides useful but incomplete suited for assessment of exposure. Mechanistic models such as population models
information on exposure, sensitivity, and adaptive capacity. Integration of these and ecophysiological models are diverse, require taxon-specific parameters, and
approaches will provide a more robust basis for vulnerability assessment and are often coupled. They are particularly effective in assessing sensitivity and
allocation of resources for conservation and adaptation. Direct observations, adaptive capacity. Experimental manipulations provide information on sensitivity
including long-term monitoring, are applicable at a broad range of scales and and adaptive capacity, and are valuable in parameterizing mechanistic models.
can be used to assess all aspects of vulnerability. Paleoecological records extend [Photo credits: direct observations (silverwashed fritillary, Argynnis paphia),
the observational foundation to encompass a broader range of rates, magni- www.learnaboutbutterflies.com; climate-envelope models, S. Brewer; population
tudes, and kinds of climate change. They can reveal adaptive capacity and risks. models, S. T. Jackson; experimental manipulations, A. K. Knapp; ecophys-
Climate-envelope (or niche) models are statistical models based on correlations iological models, W. P. Porter; paleoecological records, S. T. Jackson]
The heavy reliance of conservation manage- climate change to be faced varies widely among adjusting phenological responses in ways con-
ment and policy on a single scientific approach species. However, exposure is only one of many sistent with the relatively small climate changes
creates risks of policy or management failures, factors determining the impacts of climate change. of the past few decades (6, 26). Although some
particularly given that the underlying assump- Assessment of vulnerability must also include cli- species are undergoing rapid, widespread popu-
tions of that approach are under debate. Critiques mate sensitivity and adaptive capacity (5) (Box 1). lation declines, in most cases the primary drivers
center on the correlative nature of the niche mod- Complementary methodologies are available of decline involve land-use change and habitat
els, scale dependency, the difficulty of reliable that tell us much more about natural responses to fragmentation, biotic interactions, pathogens, and
extrapolation outside observed climate space, and climate change (Fig. 1). These indicate that bio- invasive species (8, 9). To date, there is more
failure to represent key ecological and evolution- diversity losses may not be as large as predicted evidence for climate-driven range expansion than
ary processes that could allow species to persist from niche models, although the rate of change for range contraction (27). It might appear that
in a heterogeneous landscape (13, 19–23). Niche and land use (habitat loss or destruction, harvesting) many species are coping with climate change.
models impart ease of use and power in explain- remain barriers to some natural response mecha- However, range contraction and population ex-
ing modern distributions (24), but their efficacy nisms. Approaches based on observations in the tirpation (local extinction) may be more difficult
in assessing extinction risk, delineating suitable present and the past, experiments, and new mod- to document than expansion and migration,
future habitats, and predicting ecological outcomes eling techniques are developing rapidly. Integration owing to undersampling of small or isolated
is unproven (25). of these approaches should provide the foundation populations, long-term local persistence of pop-
Niche models provide a tool for assessing for a robust science of climate-change assessment. ulations, and extinction lags (28). Extirpations
exposure to climate change as projected in var- already entrained by climate change may take
ious GCM scenarios (Box 1). Given the global Elements of Integrated Climate-Change years or decades to run their full course (29).
nature of projected climate changes (1), exposure Assessment for Biodiversity Detecting (or forecasting) species decline is
is inevitable for any species that has a finite ge- Ecological observations in real time. Many spe- challenging because the processes are not well
ographic distribution, although the amount of cies are altering their geographic ranges and understood, and species decline as well as loss
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of ecosystem function may involve threshold environments will display novel combinations of applied alongside deeper understanding of the
transitions (30–32). climate variables (12). So far there is limited biological differences among species that de-
New knowledge emerges from real-time track- evidence of microevolutionary adaptive change termine their fate under climate change.
ing of species responses to climate change, but (33), perhaps because reliable methods to detect Intrinsic adaptive capacity for climate change.
direct observations are not, on their own, a suf- microevolution have rarely been applied (34, 35). Observations, experiments, and mechanistic mod-
ficient method for forecasting risks or the intrin- Furthermore, recent case studies where the causal els indicate that many species populations have
sic capacity of species and populations to adapt. processes driving population responses to climate the capacity to adjust to climate change in situ
It remains unknown whether the ongoing range change have been disentangled suggest that the via phenotypic plasticity (e.g., acclimation, ac-
expansions and phenological shifts will allow climate variables, and the way they interact with climatization, developmental adjustments) (Fig. 2)
species populations to survive, or whether these species life history, can be both complex and (35, 39) and microevolution (40, 41), and that
are transient responses in populations with re- context-specific (30, 31, 36–38). The use of ob- many populations are able to disperse locally to
duced fitness in the changed environment. Future servational evidence will therefore need to be suitable microhabitats (42, 43) or regionally to
Fig. 2. Representative modes of population and species-range response to modes. For example, since the last glacial maximum, populations of Juniperus
environmental changes since the last glacial maximum, documented for osteosperma and Alces alces have persisted at some sites (toleration), un-
selected North American conifer trees and Eurasian cervids. Populations of dergone habitat shifts (usually elevational or topographic) within some re-
many species have persisted in situ at individual sites since the last glacial gions, and colonized extensive new territory while disappearing from previously
maximum (toleration) and many have undergone habitat shifts, moving short occupied territory (migration). Alces alces has also undergone a severe genetic
distances (1 to 10 km) to sites with different aspects, slopes, elevations, and bottleneck. Differences among modes within and among species depend on
other attributes as the environment changed. Migrations of 100 to 1000 km rates, magnitudes, and geographic patterns of climatic change, the capacity of
are well documented for many species. Both migration and habitat shift are species populations to adapt (via phenotypic plasticity, evolution, and/or dis-
forms of environment tracking, in which species adjust their geographic lo- persal), and other factors (e.g., geographic barriers, and other stressors and
cations to track suitable environments. At least a few species have undergone interactions). References, additional examples, and detailed discussion are pro-
universal extinction (e.g., Megaloceros giganteus) owing to environmental vided in the supporting online material. [Photo credits: S. T. Jackson ( Juniperus
change; others have experienced loss of genetic diversity, usually associated osteosperma, Pinus flexilis, Picea glauca, Picea martinezii); A. D. Barnosky
with severe population bottlenecks (near-extinction episodes) (e.g., Picea (Megaloceros giganteus); www.grambophoto.com (Alces alces, Cervus elaphus,
martinezii). Species’ responses to climate change may consist of multiple Rangifer tarandus)]
High
Low
Vulnerability
pace with high rates and magnitudes of climate high
change (35). These processes are, however, the
Preparedness Intensive
subject of an extensive ecological and evolution- intervention
ary literature, which has so far been underex-
ploited for determining adaptive capacity.
Adaptive capacity
Given the number and diversity of species Monitor • Ex situ conservation
climate and
Sensitivity
potentially under threat, the synthesis and ap- populations; • Reestablishment, rewilding
plication of existing evidence on adaptation will prepare • Assisted migration
provide necessary—but not sufficient—information contingency
on adaptive mechanisms and capacities. The en- plans with • Species-specific management
vironmental controls and absolute limits of pheno- increasing
• Habitat or landscape management
typic plasticity, and the environmental dependence intensity
• Passive management
of optimum phenotypes (45), must be determined
empirically for a range of species to predict in situ • Benign neglect
Low-intensity
ecological and evolutionary responses to envi- intervention
Low
High
Low
ronmental change (34, 35). Empirical and theo- vulnerability
retical studies of relevant ecological processes
(propagule dispersal, establishment, population Low High
growth, fecundity, mortality, metapopulation dy- Exposure to climate change and barriers to dispersal
namics) provide a basis for assessing response
times for local, regional, and continental adjust-
ments in distribution and abundance (46). This Fig. 3. The vulnerability of a species or ecosystem is based on its exposure to climate change, its sensitivity,
task can be simplified by using existing data and its inherent capacity to adapt to change. The relative balance of these different components of
and targeted studies of a range of representative vulnerability would lead to different management interventions. The x axis represents the degree of
exposure to climate change faced by species and communities (exogenous factors). This axis is largely
taxa with diverse life history patterns and func-
determined by the species’ or population’s geographical location, the rate and magnitude of climate
tional traits.
change anticipated for that region, and the size, cohesiveness, and connectivity of the species’ habitat
Biodiversity consequences of past climate within and beyond that region. The other two measures from the vulnerability framework, adaptive capacity
changes. Increasingly, geohistorical records and and sensitivity (see Box 1), are plotted together on the y axis. This axis is primarily determined by biological
paleoecological studies are being integrated with characteristics of species that influence their mobility, specificity, and sensitivity (endogenous factors).
independent paleoclimate records to reveal ef- These include, for example, physiological constraints, phenotypic plasticity, evolutionary potential, dispersal
fects of past climate changes (47, 48), which, in and growth capacity, and biotic interactions critical to persistence. The relative position of species and
some periods and regions, were as large and rapid ecosystems along the axes can inform decisions on appropriate research, monitoring, and management
as those projected for the future (49, 50). Al- strategies. Decisions are also likely to be affected by costs and assessments of benefits (e.g., an ecosystems
though possible future climates will be unlike service value or lower cost might shift strategies implemented toward the top right). Circled text denotes
those of the past, paleoecological records offer generic conservation responses. Specific conservation responses that will be appropriate under the different
vital information about how species responded to circumstances are discussed in the text. Species in the upper left corner have high sensitivity to climate
different rates and degrees of change, with nu- change but are expected to face relatively minor challenges. Such species are not a priority for intervention
merous case studies in terrestrial, freshwater, and unless there is a change in climate-change pressures or landscape permeability. Their potential vulnerability
marine ecosystems. The diverse outcomes for means that they need to be monitored to ensure that they are thriving and remain unthreatened, with
different taxa and life history types emphasize the contingency plans that can be deployed in a timely manner in case of change. Species with high exposure
range of past responses that are likely to be but low sensitivity and high adaptive capacity (lower right corner) can presumably cope with change, and
reflected in the present and future (Fig. 2). therefore need only low-intensity intervention as change becomes more extreme. Species in the upper right
Paleoecological observations can be further corner will have relatively high levels of both exposure and sensitivity; with decreasing adaptability, more
integrated with modern genetic and ancient DNA intensive and specific management will be required.
studies to assess the genetic consequences of
these dynamics (47, 51–53). By determining past
climate-driven losses in genetic and species di- cycle is only the most recent of at least 20 such long-distance migration and dispersal (59, 60),
versity at local to regional scales, and by iden- cycles during the past 2 million years. Ecolog- shifts along habitat gradients and mosaics (49, 61),
tifying the circumstances under which species ical and biogeographic responses to these cli- and rapid expansion under favorable conditions
have escaped extinction and populations have matic changes are particularly well documented (21). Many species have also undergone rapid
resisted extirpation, these studies can contribute for the past 10,000 to 20,000 years for many range contraction and widespread population de-
to assessments of adaptive capacity and vulner- regions; such responses included repeated re- cline (16, 49, 62). Low genetic diversity indicates
ability (Fig. 2). organization of terrestrial communities, changes that many species have passed through recent
All species or species groups living on in both the location and overall size of geo- genetic bottlenecks (63, 64). But few docu-
Earth today have persisted through a glacial- graphic ranges, and often rapid increases and mented species extinctions can be ascribed solely
to-interglacial transition 20,000 to 12,000 years decreases in sizes of local and regional popu- to climatic change (65–67). Megafaunal extinc-
ago that included rapid, high-magnitude climate lations (12, 49, 54–56). tions occurred in North America at a time of rapid
changes at all latitudes and in both terrestrial The fact that the biodiversity on Earth today climate change during the last deglaciation, but
and marine environments. This transition fol- passed through these events indicates natural re- human exploitation is also a possible cause (66).
lowed immediately upon a series of abrupt, high- silience and adaptive responses. Plant and animal Extinction of only one plant species (Picea
magnitude glacial-age climate changes with species have shown capacity for persistence in small critchfieldii) has been documented during the last
near-global impact (50). The last glacial-interglacial populations and microhabitats (52, 55, 57, 58), deglaciation (65).
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Developing an Integrated Science of about the relative urgency and the type of pacts (81) and ethical concerns (82). Despite
Climate-Change Biodiversity Assessment conservation action necessary. The diagonal axis these risks, such interventions may be necessary
The diverse sources of evidence discussed above in Fig. 3 broadly reflects increasing intensity of in some circumstances. It is not too early to
can be integrated in a vulnerability framework conservation interventions. This axis runs from debate whether, when, and how such strategies
(68). Vulnerability assessment has been sug- “laissez-faire” (i.e., let natural processes run their should be deployed (83). Finally, controlled ex
gested for prioritizing species at risk from climate course) to direct, targeted, and often intensive situ conservation, involving captive breeding and
change (5) and has been applied to both tax- “command and control” interventions. The most genetic manipulation in zoological and botanical
onomic and regional species groups (69, 70). The adaptable and/or insensitive species and those gardens and recently developed cryogenic seed
empirical foundation for trait-based climate-change with low exposure will need minimal interven- banks, may contribute to conserving species
vulnerability analysis is now starting to appear, tions with low-level monitoring, a strategy we or populations with a view to future release or
including species that were exposed to relatively call “benign neglect.” For example, in the United reintroduction.
rapid climate shifts during the Quaternary (47, 71) States and Africa, vast territories designated as The particular strategies deployed will de-
as well as some recent studies (44, 72–75). A wilderness areas or reserves are “managed” with pend on the circumstances of the species (Fig. 3)
combination of expert opinion and expectations a laissez-faire approach. Active management is and will also vary in the financial and other
from ecological and evolutionary theory has been restricted to sporadic rewilding (e.g., top-predator resources they require. The perceived conserva-
used to identify vulnerable traits for some groups reintroduction), low-impact eradication of inva- tion value of particular habitats and species will
(69, 76), including, for example, ecological spe- sive species, and removal of individuals danger- also play a part and may be informed by eco-
cialists at higher trophic levels, with long gen- ous to humans (e.g., rogue grizzly bears). These system service assessments. Thus, management
eration times, poor dispersal ability, and low designations may, of course, change in the future. decisions will depend on judgments of potential
reproductive output. Body mass is strongly cor- For example, it is likely that some ecosystems risks and benefits balanced against costs and
related with extinction risk and is often associated that currently receive minimal management, such available or anticipated resources. Decisions must
with other risk-promoting traits (e.g., delayed as boreal forests, may require more active man- balance tradeoffs. For example, creating perme-
reproductive maturity, small geographic range) agement under climate change. able landscapes to facilitate migration may be
(77). Large range sizes may imply a large pop- As exposure and sensitivity increase and more effective under climate change than inten-
ulation size and can act to buffer against habitat autonomous-response capability decreases, substan- sive management in “static” conservation areas
loss or fragmentation. A broad geographical dis- tial benefits may result from simply designating as climate change proceeds, but may risk further
tribution may not only protect against individual new protected areas and undertaking low-level spread of disease or invasive species. This as-
habitat patches becoming climatically unsuitable, habitat management to reinforce species’ intrin- sessment should aim to maximize the likelihood
but may also foster high genetic variability. How- sic dispersal and migration mechanisms. Analy- of the desired management outcome, minimize
ever, there are many exceptions to these general- ses based on niche models have prescribed this the financial costs, and assess associated risks.
izations, and paleoecological records suggest approach (15). Periodic reevaluation of ongoing
that they may break down under rapid climate and planned protected-areas strategies may be Outlook
change (49, 65). needed to maintain potential for species resilience Conservationists are increasingly concerned about
Today, many species will be required to dis- and mobility under climate change. For example, biodiversity disruption and loss as climate-change
perse rapidly through highly fragmented, human- dynamic placing of buffer zones, removal of bar- impacts intensify in the coming decades. So far
dominated landscapes in order to keep pace with riers, and establishment of corridors or “stepping the focus has mostly been on multispecies, place-
changing climate. Paleoecological evidence sug- stones” within a wider landscape may be neces- based predictions with emphasis on exposure to
gests that many plant species have responded to sary (78), although the definition, costs, and ben- climate change. Our review of the evidence from
past rapid climate changes with migration rates efits of connectivity are under debate (79). A paleohistory, current observations, experiments,
orders of magnitude higher than predicted by complementary strategy is to maintain high within- and models emphasizes the extent to which spe-
mean observed dispersal distances. This suggests region habitat heterogeneity (edaphic, topograph- cies vary in their vulnerability. This variation
a potential role for rare long-distance dispersal ic, or elevational), which provides more options represents perhaps our best hope for maintaining
(LDD) through the transportation of seeds in at- for both natural populations and conservation biodiversity and its associated ecological goods
mospheric updrafts and water courses, oceanic managers (80). and services in the future. Developing effective
currents, and dispersal by birds and animals. Hu- In any habitat or community, some species strategies will rely on improved understanding of
mans are very effective as LDD vectors and, like may require specific actions for their conserva- the nature of the climate threat to species, and the
natural LDD mechanisms, do not require contig- tion or to retain critical biological interactions. way that it interacts with their natural coping
uous habitat to establish or maintain connectivity Intermediate strategies—including intervention mechanisms. The rich history of ecological, evo-
between populations, perhaps facilitating conser- to arrest or divert natural succession or ecosystem lutionary, and paleontological field studies, brought
vation strategies. regime shifts, maintenance of specific habitats or together with relevant climate data and with
Given the evidence that the responses of spe- habitat diversity, and targeted interventions to appropriate evolutionary and ecological theory
cies and communities to climate change will be restore disrupted species interactions (e.g., polli- and modeling, has the potential to transform
highly variable, we need to move beyond pre- nator or plant-herbivore networks)—are now the way that we assess climate-change vulnera-
dictions of future range changes, which may over- widely used. Species-specific management may bility. More appropriate conservation actions will
estimate or underestimate risks in particular cases. be costly and intensive, but it can reverse the fate result from taking into account all three aspects of
Because of the variety of vulnerabilities and the of endangered species (8). vulnerability—species sensitivity, adaptive capac-
factors that contribute to them, a one-size-fits-all Intensive intervention strategies include as- ity, and exposure.
strategy risks failure. We advocate a combination sisted migration and translocation of species out- Many orthodox conservation practices, such
of strategies governed by assessment of vulner- side their native range (18). Reestablishment and as the restoration and protection of habitats and
ability and its three components—exposure, sensi- rewilding involve intensive habitat management the removal of anthropogenic pressures unrelated
tivity, and adaptive capacity—drawn from multiple to restore critical habitat types, with whole com- to climate, will continue to increase species and
lines of evidence. munities recreated from populations surviving ecosystem adaptive capacity to climate change.
Figure 3 displays species responses to climate elsewhere. These are generally considered to be Additional, more informed approaches will re-
change on two axes, based on a vulnerability high-risk strategies because of potentially nega- quire new research, especially to identify and
framework. This approach can inform managers tive ecological, evolutionary, and economic im- parameterize key ecological and evolutionary
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WorldMags
RESEARCH ARTICLES
vate sector research firm [International Data Cor-
poration (IDC)] to estimate the global hardware
capacity of digital ICT for the years 2007–2008
The World’s Technological Capacity (14). For digital storage, IDC estimates that in
2007 “all the empty or usable space on hard
to Store, Communicate, and drives, tapes, CDs, DVDs, and memory (volatile
and nonvolatile) in the market equaled 264
1
Annenberg School of Communication, University of Southern
California, Los Angeles, CA 90089, USA; United Nations Eco-
nomic Commission for Latin America and the Caribbean (ECLAC).
2
Information and Communication Sciences Department, Open
University of Catalonia, Barcelona 08018, Spain.
*To whom correspondence should be addressed. E-mail:
mhilbert@usc.edu Fig. 1. The three basic information operations and their most prominent technologies.
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60 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
RESEARCH ARTICLES
(such as RAM) because the ultimate end of vol- fined computation as the meaningful transforma- some two or three dozen categories of ICT over
atile memory is computation, not storage per se. tion of information and estimated the installed three consecutive years at most, our study en-
Communication was defined as the amount of (available) capacity. compasses worldwide estimates for 60 categories
information that is effectively received or sent by More precisely, as shown in Fig. 1, we dis- (21 analog and 39 digital) and spans over two
the user while being transmitted over a consid- tinguished among storage of information in bits, decades (1986–2007).
erable distance (outside the local area). This in- unidirectional diffusion through broadcasting in We obtained the technological capacity by
cludes those transmissions whose main purpose bits per second, bidirectional telecommunication multiplying the number of installed technological
consists in the overcoming of distances, not the in bits per second, computation of information by devices with their respective performances. All
local sharing of information (such as the distribu- general purpose computers in instructions per estimates are yearly averages, but we adjusted
tion of copies at a meeting, or communication second [or MIPS, million (or mega) instructions for the fact that the installed technological stock
through private local area networks). We took in- per second], and the estimated computational ca- of a given year is the result of an accumulation
ventory of the effective communication capacity pacity of a selected sample of application-specific process of previous years, whereas each year’s
(the actual amount of bits transmitted). We de- devices (MIPS). Whereas previous studies tracked technologies contribute with different perfor-
mance rates. We used 1120 sources and explain
our assumptions in detail in (16). The statistics
we rely on include databases from international
organizations [such as (17–22)], historical in-
ventories from individuals for commercial or
academic purposes [such as (23–26)], publicly
available statistics from private research firms
[such as (27, 28)], as well as a myriad of sales
and product specifications from equipment
producers. We filled in occasional blanks with
either linear or exponential interpolations, de-
pending on the nature of the process in question.
Frequently, we compared diverse sources for
the same phenomena and strove for reasonable
middle grounds in case of contradictions. In cases
in which specific country data were not available,
we aimed for a globally balanced outlook by
creating at least two international profiles, one for
the “developed” member countries of the Organ-
isation for Economic Co-operation and Develop-
ment (OECD) and another one for the rest of
the world.
Information, not hardware with redundant
data. Although the estimation of the global hard-
Fig. 2. World’s technological installed capacity to store information (table SA1) (16). ware capacity for information storage and com-
munication is of interest for the ICT industry
(14), we are more interested in the amount of
information that is handled by this hardware.
Therefore, we converted the data contained in
storage and communication hardware capaci-
ty into informational bits by normalizing on
compression rates. This addresses the fact that
information sources have different degrees of
redundancy. The redundancy (or predictability)
of the source is primarily determined by the con-
tent in question, such as text, images, audio, or
video (29, 30). Considering the kind of content,
we measured information as if all redundancy
were removed with the most efficient compres-
sion algorithms available in 2007 (we call this
level of compression “optimally compressed”).
Shannon (29) showed that the uttermost com-
pression of information approximates the entropy
of the source, which unambiguously quantifies
the amount of information contained in the mes-
sage. In an information theoretic sense (30), in-
formation is defined as the opposite of uncertainty.
Shannon (29) defined one bit as the amount of
information that reduces uncertainty by half (re-
garding a given probability space, such as letters
Fig. 3. World’s technological effective capacity to broadcast information in optimally compressed from an alphabet or pixels from a color scale).
megabytes MB per year, for 1986, 1993, 2000, and 2007; semi-logarithmic plot (table SA2) (16). This definition is independent of the specific task
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The inventories of Figs. 3 and 4 account for optimally compressed zettabytes in 2007. Cable lion Internet subscriptions). Nevertheless, the fixed-
only those bits that are actually communicated. In and satellite TV steadily gained importance, but line phone is still the solution of choice for voice
the case of telecommunication, the sum of the analog, “over-the-air” terrestrial television still communication (1.5% of the total). The mobile
effective usages of all users is quite similar to the dominated the evolutionary trajectory. Digital phone network became increasingly dominated
total installed capacity (any difference represents satellite television led the pack into the digital by data traffic in 2007 (1.1% for mobile data
an over- or future investment). This is because age, receiving 50% of all digital broadcast signals versus 0.8% for mobile voice).
most backbone networks are shared and only in 2007. Only a quarter of all broadcasting in- When compared with broadcasting, telecom-
used sporadically by an individual user. If all formation was in digital format in 2007. The share munications makes up a modest but rapidly grow-
users demanded their promised bandwidth simul- of radio declined gradually from 7.2% in 1986 ing part of the global communications landscape
taneously, the network would collapse. This is to 2.2% in 2007. (3.3% of the sum in 2007, up from 0.07% in
not the case for individual broadcast subscribers, Figure 4 presents effective capacity of the 1986). Although there are only 8% more broad-
who could continuously receive incoming infor- three most common bidirectional analog tele- cast devices in the world than telecommunication
mation. To meaningfully compare the carrying communication technologies and their four most equipment (6.66 billion versus 6.15 billion in
capacities of each, we applied effective consump- prominent digital heirs. The 281 petabytes of op- 2007), the average broadcasting device commu-
tion rates to the installed capacity of broadcasting timally compressed information from 1986 were nicates 27 times more information per day than
(calling it the effective capacity). This reduced overwhelmingly dominated by fixed line teleph- the average telecommunications gadget. This re-
the installed capacity by a stable factor (by 9 in ony, whereas postal letters contributed only 0.34%. sult might be unexpected, especially considering
1986, 9.1 in 1993, 8.7 in 2000, and 8.4 in 2007), The year 1993 was characterized by the digitiza- the omnipresence of the Internet, but can be un-
implying an average individual broadcast con- tion of the fixed phone network (471 optimally derstood when considering that an average Inter-
sumption of roughly 2 hours and 45 min per 24 compressed petabytes). We estimate the year net subscription effectively uses its full bandwidth
hours. It did not notably change the relative 1990 to be the turning point from analog to dig- for only around 9 min per day (during an average
distribution of the diverse technologies (Fig. 3). ital supremacy. The Internet revolution began 1 hour and 36 min daily session).
Figure 3 displays the capacity of six analog shortly after the year 2000. In only 7 years, the Computation. From a theoretical standpoint,
and five digital broadcast technologies, including introduction of broadband Internet effectively mul- a “computation” is the repeated transmission of
newspapers and personal navigation devices [glob- tiplied the world’s telecommunication capacity information through space (communication) and
al postioning system (GPS)]. In 1986, the world’s by a factor of 29, from 2.2 optimally compressed time (storage), guided by an algorithmic pro-
technological receivers picked up around 432 exabytes in 2000 to 65 in 2007. The most wide- cedure (31). The problem is that the applied
exabytes of optimally compressed information, spread telecommunication technology was the algorithmic procedure influences the overall per-
715 optimally compressed exabytes in 1993, 1.2 mobile phone, with 3.4 billion devices in 2007 formance of a computer, both in terms of hard-
optimally compressed zettabytes in 2000, and 1.9 (versus 1.2 billion fixed-line phones and 0.6 bil- ware design and in terms of the contributions of
software. As a result, the theoretical, methodo-
logical, and statistical bases for our estimates for
Fig. 6. Annual growth of computation are less solid than the ones for stor-
installed general-purpose age and communication. In contrast to Shannon’s
computational capacity as bit (29, 30), there is no generally accepted theory
percentage of all previous that provides us with an ultimate performance
computations since 1977 measure for computers. There are several ways to
(year t / S[1977, year measure computational hardware performance.
t – 1]) (table SA2) (16).
We chose MIPS as our hardware performance
metric, which was imposed on us by the reality of
available statistics. Regarding the contributions
of software, it would theoretically be possible to
normalize the resulting hardware capacity for
algorithmic efficiency (such as measured with
O-notation) (32). This would recognize the con-
Table 1. Evolution of the world’s capacity to store, communicate, and compute information, absolute per
stant progress of algorithms, which continuously
capita, CARG, and percentage in digital format (tables SA1 to SA3 and SA5) (16).
make more efficient use of existing hardware.
1986 1993 2000 2007 CAGR 1986–2007 However, the weighted contribution of each al-
gorithm would require statistics on respective exe-
MB optimal compression
Storage 539 2,866 8,988 44,716 23% cution intensities of diverse algorithms on different
per capita (installed capacity)
computational devices. We are not aware of such
Percent digital 0.8% 3% 25% 94%
statistics. As a result of these limitations, our es-
MB optimal compression
timates refer to the installed hardware capacity of
Broadcast per capita per day 241 356 520 784 6%
computers.
(effective capacity)
We distinguished between two broad groups
Percent digital 0.0% 0.0% 7.3% 25%
of computers. The first group includes all com-
MB optimal compression
puters whose functionality is directly guided by
Telecom per capita per day 0.16 0.23 1.01 27 28%
their human users. We call this group “general-
(effective capacity)
purpose computers” and include six technolog-
Percent digital 19.8% 68.5% 97.7% 99.9%
ical families (Fig. 5). The second group carries
General-purpose MIPS per capita
0.06 0.8 48 968 58% out automated computations that are incidental to
computation (installed capacity)
the primary task, such as in electronic appliances
Sample of
MIPS per capita or visual interfaces. The user may have a range of
application-specific 0.09 3.3 239 28,620 83%
(installed capacity) predefined choices regarding their functionality
computation
but cannot change the automated logic of these
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64 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
RESEARCH ARTICLES
15. R. Bohn, J. Short, “How Much Information? 2009 Report 26. T. Coughlin, “Digital Storage Technology Newsletters” 37. This is considering a quaternary DNA alphabet, in
on American Consumers” (Global Information Industry (Coughlin Associates, Atascadero, CA, 2007); available at which each base pair can store 4 bits × 3 billion
Center of University of California, San Diego, San Diego, CA, www.tomcoughlin.com/. DNA base pairs per human cell × 60 trillion cells
2009); available at http://hmi.ucsd.edu/howmuchinfo.php. 27. Global Technology Team, “Technology Q1 2006 Global per adult human. Because base pair couples are
16. Materials and methods are available as supporting Technology Data Book” (Morgan Stanley, New York, determined, the 4 bits can be compressed to 2 bits,
material on Science Online. 2006); available at www.morganstanley.com/institutional/ which can optimally be compressed to 1.73 inside
17. International Telecommunications Union (ITU), “World techresearch/pdfs/global_techdatabook0306.pdf. one cell (40).
Telecommunication/ICT Indicators Database” (ITU, Geneva, 28. International Data Corporation (IDC), IDC Media Center 38. S. Lloyd, Phys. Rev. Lett. 88, 237901 (2002).
2010); available at www.itu.int/ITU-D/ict/statistics/. (2008); available at www.idc.com/about/press.jsp. 39. G. E. Moore, Proc. SPIE 2439, 2 (1995).
18. Faostat, ForesSTAT (Food and Agriculture Organization of 29. C. Shannon, Bell Syst. Tech. J. 27, 379–423 and 40. X. Chen, M. Li, B. Ma, J. Tromp, Bioinformatics 18, 1696
the United Nations, 2010); available at http://faostat.fao.org/. 623–656 (1948). (2002).
19. Universal Postal Union (UPU), Postal Statistics (UPU, 30. T. M. Cover, J. A. Thomas, Elements of Information Theory 41. We thank the Information Society Program of United Nations
Berne, Switzerland, 2007); available at www.upu.int/en/ (Wiley-Interscience, Hoboken, NJ, 2006). ECLAC (in Chile) for its support; T. Coughlin, J. McCallum,
resources/postal-statistics/. 31. A. M. Turing, Proc. London Math. Soc. s2, 230 D. Franz, M. Gonzalez, C. Vasquez, L. Adleman, M. Castells,
20. International Federation of the Phonographic Industry (IFPI), (1937). and the statisticians from UPU (Universal Post Union)
“The Recording Industry World Sales 1995–2004”; available 32. T. Cormen, C. Leiserson, R. Rivest, C. Stein, Introduction and ITU (International Telecommunications Union); as
at www.ifpi.org/content/section_statistics/index.html. to Algorithms (McGraw-Hill, Boston, 2003). well as numerous colleagues who motivated us by doubting
21. Japanese Recording-Media Industries Association, “Press 33. B. Gardiner, Wired Mag. “Astrophysicist Replaces the feasibility of this undertaking.
Releases” (2007); available at www.jria.org/english.html. Supercomputer with Eight PlayStation 3s”; available
22. TOP500, “TOP500 List Releases” (TOP500 Supercomputer at www.wired.com/techbiz/it/news/2007/10/ps3_ Supporting Online Material
sites, 2009); available at www.top500.org/lists. supercomputer (2007). www.sciencemag.org/cgi/content/full/science.1200970/DC1
23. J. Porter, “Disk/Trend Reports 1977–1999” (California, 34. Moore’s law measures technological progress Materials and Methods
2005); available at www.disktrend.com/. of computer performance by counting the numbers Figs. A1 to E12
24. R. Longbottom, “Computer Speed Claims 1980 to 1996” of transistors on an integrated circuit, which has Tables SA1 to SE24
(Roy Longbottom’s PC Benchmark collection, 2006); approximately doubled every 2 years since the References and Notes
available at www.roylongbottom.org.uk/mips.htm. 1960s (39).
25. J. McCallum, in “The Computer Engineering Handbook,” 35. D. Sahal, Res. Policy 14, 61 (1985). 29 November 2010; accepted 1 February 2011
V. G. Oklobdzija, Ed. (CRC, Boca Raton, FL, 2002), 36. This is assuming 100 billion neurons × 1000 connections Published online 10 February 2011;
pp. 136–153. per neuron × maximum 1000 nerve impulses per second. 10.1126/science.1200970
Chronic Mucocutaneous Candidiasis (1). CMC disease (CMCD), the molecular and
cellular basis of which is unknown, consists of
CMC in the absence of other overt infectious
in Humans with Inborn Errors of or autoimmune signs (1). CMCD was initially
thought to be benign, until squamous cell carci-
Interleukin-17 Immunity noma (9) and cerebral aneurysms (10) were re-
ported. First described in 1967 in sporadic cases
(11), familial CMC segregating as autosomal dom-
Anne Puel,1*‡ Sophie Cypowyj,2* Jacinta Bustamante,1 Jill F. Wright,3 Luyan Liu,1 inant (AD) (12) and autosomal recessive (AR)
Hye Kyung Lim,2 Mélanie Migaud,1 Laura Israel,1 Maya Chrabieh,1 Magali Audry,2 traits (13) was soon reported. We thus searched for
Matthew Gumbleton,4 Antoine Toulon,5 Christine Bodemer,5 Jamila El-Baghdadi,6 the genetic basis of CMCD, testing the hypoth-
Matthew Whitters,3 Theresa Paradis,3 Jonathan Brooks,3 Mary Collins,3 esis that CMCD may be caused by inborn errors
Neil M. Wolfman,3 Saleh Al-Muhsen,7 Miguel Galicchio,8 Laurent Abel,1,2† of IL-17A, IL-17F, or IL-22 immunity (1, 14).
Capucine Picard,1,9,10† Jean-Laurent Casanova1,2,7,10‡ Autosomal recessive IL-17RA deficiency. We
first investigated a French child born to first-
Chronic mucocutaneous candidiasis disease (CMCD) is characterized by recurrent or persistent cousin parents of Moroccan descent (Fig. 1A)
infections of the skin, nails, and oral and genital mucosae caused by Candida albicans and, to [report S1 (15)]. He presented with C. albicans
a lesser extent, Staphylococcus aureus, in patients with no other infectious or autoimmune dermatitis during the neonatal period and dis-
manifestations. We report two genetic etiologies of CMCD: autosomal recessive deficiency in the
cytokine receptor, interleukin-17 receptor A (IL-17RA), and autosomal dominant deficiency of 1
the cytokine interleukin-17F (IL-17F). IL-17RA deficiency is complete, abolishing cellular responses Laboratory of Human Genetics of Infectious Diseases, Necker
Branch, Institut National de la Santé et de la Recherche
to IL-17A and IL-17F homo- and heterodimers. By contrast, IL-17F deficiency is partial, with mutant Médicale, U980, and University Paris Descartes, Necker
IL-17F–containing homo- and heterodimers displaying impaired, but not abolished, activity. Medical School, 75015 Paris, France. 2St. Giles Laboratory of
These experiments of nature indicate that human IL-17A and IL-17F are essential for Human Genetics of Infectious Diseases, Rockefeller Branch,
mucocutaneous immunity against C. albicans, but otherwise largely redundant. The Rockefeller University, New York, NY 10065, USA. 3In-
flammation and Immunology, Pfizer Research, Cambridge,
MA 02140, USA. 4SUNY Upstate Medical University, Syracuse,
NY 13210, USA. 5Dermatology Unit, Necker Hospital, 75015
hronic mucocutaneous candidiasis (CMC) interleukin-12 receptor b1 (IL-12Rb1) deficiency
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66 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
RESEARCH ARTICLES
WT IL-17F homodimers (fig. S12C). These allele, which impairs the receptor binding and IL-17F are also vulnerable (27). IL-17A or IL-17F
data suggest that the IL17F S65L allele is se- bioactivity of both IL-17F homodimers and IL- alone are not required for peripheral immunity
verely hypomorphic (Fig. 4, A and B, and fig. 17A–IL-17F heterodimers. to S. aureus, but mice deficient for both IL-17A
S12, A and B). Furthermore, when the S65L Concluding remarks. IL-17RA and IL-17F and IL-17F display an impaired peripheral im-
mutant IL-17F formed a heterodimer with either deficiencies underlying mucocutaneous disease munity to S. aureus (28). Somewhat at odds with
IL-17FWT or IL-17A, the induction of IL-6 and caused by C. albicans and, to a lesser extent, our observations, IL-17A is also required for sys-
GRO-a was severely impaired in control fibro- S. aureus are consistent with the mouse model temic immunity to C. albicans (29) and S. aureus
blasts (Fig. 4, A and B) and keratinocytes (fig. (23). IL-17RA– and IL-17RC–deficient mice (30). Moreover, mice with IL-17RA, IL-17RC,
S12, A and B), which indicated a dominant- were more susceptible to oropharyngeal candi- IL-17A, or IL-17F deficiency are vulnerable to
negative effect of this allele. Finally, as predicted diasis (24, 25) and IL-17RA–deficient mice to multiple infections at various anatomical sites
by the lack of binding of mutant cytokine di- cutaneous staphylococcal disease (26). IL-17A– (17, 23). Overall, our report indicates that hu-
mers to their receptor (fig. S11), these dimers deficient mice also display impaired clearance of man IL-17A and IL-17F are essential for pro-
did not compete with WT dimers (fig. S13, A to C. albicans skin infection (27). IL-17F–deficient tective immunity to C. albicans and, to a lesser
D). Thus, the AD CMCD in this kindred results mice have not yet been tested, but IL-23–deficient extent, S. aureus in the nails, skin, and oral and
from a hypomorphic, dominant-negative IL17F mice with impaired expression of IL-17A and genital mucosae, but otherwise redundant. We
Cell counts
Cell counts
0 0
0 1 2 3 4 0 1 2 3 4
10 10 10 10 10 10 10 10 10 10 0 0
0 1 2 3 4 0 1 2 3 4
10 10 10 10 10 10 10 10 10 10
Non adherent PBMCs
IL-17RA
80
Control
80
Patient
E 0.25
Empty vector
IL-17RA WT
0.20
IL-6 (ng/ml)
0.15
0.10
0 0 0.05
0 1 2 3 4 0 1 2 3 4
10 10 10 10 10 10 10 10 10 10
B IL-17RA 0
NS IL-17A/ IL-17F/ IL-17A/
50.0 IL-17A IL-17F IL-17F
Control
F 0.80
Patient Empty vector
40.0 IL-17RA WT
NEMO-/-
IL-6 (ng/ml)
GRO-α (ng/ml)
0.60
30.0
2.0 0.40
1.0
0.20
UD.
UD.
UD.
UD.
UD.
0
NS IL-17A/ IL-17F/ IL-17A/ IL-1β
C IL-17A IL-17F IL-17F 0
60.0 NS IL-17A/ IL-17F/ IL-17A/
Control IL-17A IL-17F IL-17F
Patient
50.0 NEMO-/-
Fig. 2. Production and function of the mutant IL-17RA chain. (A) IL-17RA
GRO-α (ng/ml)
40.0
expression in SV40-immortalized fibroblasts (top) and nonadherent PBMCs (bot-
tom) from a control and the patient, as detected by flow cytometry. Isotype
control, black; IL-17RA antibody, gray. (B) IL-6 and (C) GRO-a production by
2.0
SV40-immortalized fibroblasts from a control, the patient, and NEMO-deficient
cells after 24 hours of stimulation with IL-17A, IL-17F, and IL-17A–IL-17F. Means T
1.0 SD (error bars) of three independent experiments, as detected by ELISA. UD,
undetectable. (D) IL-17RA expression in SV40-immortalized fibroblasts from the
0 patient, transfected with the empty pORF9mcs plasmid (left) or the pORF9-hIL-
NS IL-17A/ IL-17F/ IL-17A/ IL-1β
IL-17A IL-17F IL-17F 17RA plasmid (right), as detected by flow cytometry. Isotype control, black; IL17RA
antibody, gray. (E) IL-6 and (F) GRO-a production by SV40-immortalized fibro-
blasts from the patient, transfected with the empty pORF9mcs plasmid (white) or the pORF9-hIL17RA plasmid (gray), after 24 hours of stimulation with IL-17A,
IL-17F, and IL-17A–IL-17F. Means T SD (error bars) of three independent experiments, as detected by ELISA.
NS
NS
IL-17Fm
IL-17Fm
IL-17Fm/
IL-17Fm
IL-17F/
IL-17F
IL-17A/
IL-17A
IL-17A/
IL-17Fm/
IL-17Fm
IL-17A/
IL-17A
IL-17F/
IL-17F
IL-17F
IL-17A/
IL-17A/
IL-17A/
IL-17F/
IL-17F
IL-17F/
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68 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
REPORTS
350- to 610-km, 70°-inclination orbit as part of
the Russian Resurs-DK1 spacecraft (14).
PAMELA Measurements of Our results are consistent with those of other
experiments (Fig. 1), considering the statistical
Cosmic-Ray Proton and Helium Spectra and systematic uncertainties of the various ex-
periments. There are differences at low energies
(< 30 GeV) caused by solar-modulation effects
O. Adriani,1,2 G. C. Barbarino,3,4 G. A. Bazilevskaya,5 R. Bellotti,6,7 M. Boezio,8 [PAMELA was operating during a period of min-
E. A. Bogomolov,9 L. Bonechi,1,2 M. Bongi,2 V. Bonvicini,8 S. Borisov,10,11,12 S. Bottai,2 imum solar activity with a solar-modulation pa-
A. Bruno,6,7 F. Cafagna,7 D. Campana,4 R. Carbone,4,11 P. Carlson,13 M. Casolino,10 rameter (F) of 450 to 550 MV in the spherical
G. Castellini,14 L. Consiglio,4 M. P. De Pascale,10,11 C. De Santis,10,11 N. De Simone,10,11 force-field approximation (15)]. PAMELA results
V. Di Felice,10 A. M. Galper,12 W. Gillard,13 L. Grishantseva,12 G. Jerse,8,15 A. V. Karelin,12 overlap with Advanced Thin Ionization Calorim-
S. V. Koldashov,12 S. Y. Krutkov,9 A. N. Kvashnin,5 A. Leonov,12 V. Malakhov,12 V. Malvezzi,10 eter (ATIC)–2 data (16) between ~200 and ~1200
L. Marcelli,10 A. G. Mayorov,12 W. Menn,16 V. V. Mikhailov,12 E. Mocchiutti,8 A. Monaco,6,7 GV, but differ both in shape and absolute normal-
N. Mori,1,2 N. Nikonov,9,10,11 G. Osteria,4 F. Palma,10,11 P. Papini,2 M. Pearce,13 ization at lower energies. The extrapolation to
P. Picozza,10,11* C. Pizzolotto,8 M. Ricci,17 S. B. Ricciarini,2 L. Rossetto,13 R. Sarkar,8 higher energy of the PAMELA fluxes suggests a
M. Simon,16 R. Sparvoli,10,11 P. Spillantini,1,2 Y. I. Stozhkov,5 A. Vacchi,8 E. Vannuccini,2 broad agreement with the results of CREAM (Cos-
G. Vasilyev,9 S. A. Voronov,12 Y. T. Yurkin,12 J. Wu,13† G. Zampa,8 N. Zampa,8 V. G. Zverev12 mic Ray Energetics and Mass Experiment) (17)
and JACEE (Japanese-American Collaborative
Protons and helium nuclei are the most abundant components of the cosmic radiation. Precise Emulsion Experiment) (18); the extrapolation of
measurements of their fluxes are needed to understand the acceleration and subsequent PAMELA helium flux is higher than the helium
propagation of cosmic rays in our Galaxy. We report precision measurements of the proton and flux measured by RUNJOB (Russia-Nipon Joint
helium spectra in the rigidity range 1 gigavolt to 1.2 teravolts performed by the satellite-borne Balloon) experiment (19).
experiment PAMELA (payload for antimatter matter exploration and light-nuclei astrophysics). To gain a better understanding of the spectra,
We find that the spectral shapes of these two species are different and cannot be described well we have analyzed our results in terms of rigidity
by a single power law. These data challenge the current paradigm of cosmic-ray acceleration in instead of kinetic energy per nucleon (Fig. 2 and
supernova remnants followed by diffusive propagation in the Galaxy. More complex processes tables S3 and S4). Two important conclusions
of acceleration and propagation of cosmic rays are required to explain the spectral structures can be drawn from the PAMELA data.
observed in our data. First, the proton and helium spectra [J(R)]
have different spectral shapes. If a single power
law, J ðRÞ ¼ AR − g (where A is the normalization
R
ince the discovery of cosmic rays, various At the end of the acceleration phase, particles
IMAX (1992)
IMAX (1992) CAPRICE (1994)
CAPRICE (1994)
CAPRICE (1998)
CAPRICE (1998) AMS (1998)
AMS (1998)
ATIC-2 (2007)
ATIC-2 (2007) BESS (2002)
BESS (2002)
CREAM (2004-2006)
CREAM (2004-2006) JACEE (1994)
JACEE (1994)
2
10 RUNJOB (1995-1999)
RUNJOB (1995-1999) PAMELA
PAMELA
PAMELA systematic
PAMELA systematic error
error band
band
2 3 4
1 10 10 10 10
E (GeV/n)
Fig. 2. Proton (top data set) and helium (bottom data set)
fluxes measured by PAMELA in the rigidity range 1 GV to
1.2 TV. The pink shaded areas represent the estimated 104
systematic uncertainty. The lines represent the fit with a
single power law and the GALPROP (36) and Zatsepin (29)
Flux × R2.7 (m2 s sr GV)-1GV2.7
3
10
102
PAMELA
Zatsepin et al. 2006 (fitted to data)
GALPROP φ=450 MV
Zatsepin et al. 2006
Single power law fit
3
1 10 102 10 104
R (GV)
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REPORTS
2:77 T 0:03(stat) T 0:004 ( syst). We applied At 230 to 240 GV, the proton and helium data proton spectrum occurs at232þ35−30 GV with change
Fisher’s and Student’s t tests to the single–power-law exhibit an abrupt spectral hardening. Applying of spectral index from gR80−232GV;p ¼ 2:85 T
hypothesis in the range 30 to 230 GV for both Fisher’s test and Student’s t test to the proton 0:015(stat) T 0:004(syst) to gR>232GV;p ¼ 2:67 T
protons and helium [see section 5 of the sup- spectrum above 80 GV, the single–power-law 0:03 T 0:05. For the helium data, the single–
porting online material (SOM) for details]. This hypothesis is rejected at 99.7% CL if only sta- power-law hypothesis is rejected at 95% CL
hypothesis is rejected at the 95% confidence level tistical errors are considered. A similar result is with spectral hardening setting in at 243þ27 −31
(CL). Considering the same rigidity interval in obtained if the fluxes are increased in line with GV and a corresponding change of spectral in-
terms of kinetic energy per nucleon, the Fisher’s the systematic uncertainties. If the fluxes are dex of gR80−240GV;He ¼ 2:766 T 0:01 T 0:027 and
and Student’s t tests reject a single–power-law instead decreased, the single–power-law hypoth- gR>243GV;He ¼ 2:477 T 0:06 T 0:03. As a con-
hypothesis at 99.7% CL. esis is rejected at 95% CL. The hardening of the sistency check, we repeated this analysis with
the three highest-energy data points excluded;
no changes in the proton and helium results were
observed. We obtained similar results when we
used alternative statistical methods such as the
cumulative sum test (see section 5.4 in the SOM).
One of the most notable features of the cos-
mic rays before PAMELA observations was their
10 apparently featureless energy spectra. Until now,
single power laws, as predicted by the shock dif-
p/He
Spontaneous Ferroelectric Order in a ically free to adopt any orientation), has not yet
been realized because known molecular archi-
tectures do not have interactions that are strong
Bent-Core Smectic Liquid Crystal of enough to stabilize polar order in the translation-
ally symmetric milieu of a three-dimensional (3D)
Fluid Orthorhombic Layers liquid. The more recent discoveries of spontane-
ous polar ordering (3) and macroscopic chirality
(4) in fluid smectic liquid crystals (LCs) of achiral
R. Amaranatha Reddy,1 Chenhui Zhu,2 Renfan Shao,2 Eva Korblova,1 Tao Gong,1 bent-core molecules, phases of stacked 2D fluid
Yongqiang Shen,2 Edgardo Garcia,1,3 Matthew A. Glaser,2 Joseph E. Maclennan,2 layers, has opened a new path for making ma-
David M. Walba,1 Noel A. Clark2* terials with polar fluid degrees of freedom, exploit-
ing the much stronger intermolecular interaction
Macroscopic polarization density, characteristic of ferroelectric phases, is stabilized by dipolar afforded by their polar steric molecular shape, the
intermolecular interactions. These are weakened as materials become more fluid and of higher exploration of which has generated a rich new
symmetry, limiting ferroelectricity to crystals and to smectic liquid crystal stackings of fluid class of soft materials (5, 6).
layers. We report the SmAPF, the smectic of fluid polar orthorhombic layers that order into a The bent-core fluid lamellar LCs can be grouped
three-dimensional ferroelectric state, the highest-symmetry layered ferroelectric possible and according to whether the constituent 2D layers
the highest-symmetry ferroelectric material found to date. Its bent-core molecular design have an optical dielectric tensor principal axis
employs a single flexible tail that stabilizes layers with untilted molecules and in-plane polar (OPA) along the layer normal (SmA, orthogonal)
ordering, evident in monolayer-thick freely suspended films. Electro-optic response reveals the or not (SmC, monoclinic). The orthogonal achiral
three-dimensional orthorhombic ferroelectric structure, stabilized by silane molecular terminations
that promote parallel alignment of the molecular dipoles in adjacent layers. 1
Department of Chemistry and Biochemistry, Liquid Crystal
Materials Research Center, University of Colorado, Boulder, CO
he first theoretical description of the ordering of its molecular electric dipoles (2). Such 80309–0215, USA. 2Department of Physics, Liquid Crystal
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72 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
REPORTS
smectic phases of interest here consist of layers polar fluid smectic layers, typically with a tilted tion in the small-angle region due to the smectic
of one of the symmetries sketched in Fig. 1A: principal axis as in the SmCP of Fig. 2A and layering (Fig. 1) and diffuse scattering with a peak
(i) uniaxial (C∞h), the SmA phase (7), some ex- antiferroelectric 3D interlayer order [compound at a spacing of D ~ 4.6 Å, indicating liquid-like in-
amples of which have high susceptibility for 1 (4)]. Molecules that favor untilted layers and plane order (18). The layer spacing L ~ 61 Å is
field-induced in-plane polar order (8); (ii) uniaxial ferroelectric interlayer order are then obtained re- much larger than the calculated extended (all
polar C∞v, the polar smectic A phase, not yet spectively by (18) (i) reducing the tendency for trans) molecular length Lm ~ 52 Å (18), im-
found in bent-core materials; (iii) nonpolar ortho- tilt by employing molecules with only a single plying a structure in which each layer is non-
rhombic (D2h), the biaxial SmAb phase (9–11); alkyl tail to provide more space for the tails and polar along the layer normal z, with the cores
and (iv) polar orthorhombic (C2v), the SmAP thus lower their in-plane entropic pressure (Fig. strongly overlapping but having half the mole-
phases, with fluid in-plane layer polarization and 2D) (12) and (ii) reducing the tendency for anti- cules in each layer with tails along +z and half
macroscopic antiferroelectric ordering of adja- ferroelectric layer ordering by terminating the tail with tails along –z, in both the SmA and SmAPF
cent layers (SmAPA) (12–17). Here, we report a with a carbosilane group to suppress the inter- phases ( Fig. 1B, inset, and fig. S7) (18).
fluid smectic ferroelectric phase with orthorhom- penetration of tails in adjacent layers (ellipse, Fig. The optical textures of samples of W586 were
bic symmetry, the highest symmetry polar fluid 2C) (19). studied using four distinct preparation methods:
possible in a layered system, leaving only the ful- X-ray, optical, and calorimetric studies of (i) freely suspended films (Fig. 3, F and G, and
ly 3D liquid uniaxial or biaxial polar nematics W586 provide compelling evidence for the target fig. S2) (18); and, with the LC in few-micron-
among higher symmetry polar fluid phases to SmAPF phase. W586 melts upon heating at T = thick gaps between glass plates: (ii) homeotropic
be realized. 110°C and exhibits the following phase sequence cells, made using clean glass plates, yielding ho-
The approach to the design of W586 (Fig. on cooling: isotropic (I) – 155°C – SmA – 136°C – meotropic alignment, i.e., smectic layers parallel
1B) is to start with the bow-shaped structural SmAPF – 80°C – crystal (X). In both the SmA to the plates (Fig. 3, A and E); (iii) random-planar
theme exemplified by the mesogen cores shown and SmAPF phases, synchrotron x-ray diffraction cells, made using nylon films on clean glass or
in Fig. 2, B and E, known to form spontaneously exhibited a resolution-limited, first-order reflec- indium/tin oxide (ITO) coated glass plates, yield-
ing random planar focal-conic textures with the
smectic layers locally normal to the plates (Fig.
3B); and (iv) aligned planar cells, made using
A
rubbed Teflon films on glass or ITO, yielding
planar alignment of oriented smectic layers nor-
mal to both the rubbing direction and the plates
(Fig. 3, C and D).
z The phase identified as SmA gives excellent
extinction between crossed polarizer and ana-
lyzer in the homeotropic geometry (Fig. 3A, left),
evidence for an optical uniaxis normal to the
layers and plates. In contrast, upon cooling to the
B 62.0 phase identified as SmAPF, a distinct Schlieren
z texture of in-layer birefringence appeared (Fig.
3A, right, and 3E), characterized by smooth brush
61.5 p
61Å o patterns indicative of slowly varying optical an-
isotropy and thus revealing in-layer orientational
layer spacing, L (Å)
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74 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
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of probing the tilt of the OPA with respect to the ordering of the molecules about the layer normal, where the in-plane quadrupolar order parameter,
layer normal. Our observations, for example, the z, at different temperatures. Application of a Q = (〈cos2fi〉 – 〈sin2fi〉), is the second moment
equal intensity of the four brushes in the DRLM triangle wave voltage v(t) across the cell plates of fluctuations of bi about p. Because e = n2 and
images of N = 1 films (Fig. 3G), show no evidence induces peaks in the optical transmission between Dn is small, the in-plane refractive index an-
for a tilted OPA in W586 films, eliminating the crossed polarizers and a polarization current isotropy is Dn = De/2 n = (ep – eo)/2 n, where
the SmCAPF as a possible structure (18). (inset, Fig. 4B) in the SmAPF phase, indicating the mean in-plane refractive index is given by
qffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffiffi
In films, the SmA to SmAP phase transition a Goldstone-like response of macroscopic ferro-
n = (n2p þ n2o )=2 ≈ (np þ no )=2. Both P and
was observed at 150°C, slightly elevated relative electric ordering, which we have analyzed in de-
to the bulk, as often found in smectic films. Both tail. The field couples to P, tending to minimize Q will depend on temperature T.
the response to applied electric field and the in- the electrostatic potential energy density –P•E = We consider planar alignment so that z is
plane birefringence decrease substantially with –PEcosy, by varying the azimuthal orientation parallel to the glass, giving an index nz = ez1/2 for
increasing temperature in the SmAPF phase but y of P, where we take y = 0 when P is parallel light polarized along z and incident normally on
do not disappear completely even in the SmA to E (Fig. 4A) . In molecular terms, P = Pp = the cell. The effective in-plane index, neff (y), for
phase. Fine-texture birefringence patterns persist Pm〈p • bi〉p = pPm〈cosfi〉, where fi gives the light polarized normal to z is given by 1/neff (y)2 =
into the SmA phase and only gradually disappear azimuthal orientation of the bow plane bi of mol- sin2y/np2 + cos2y/no2, and the planar cell trans-
with increasing temperature, suggestive of rem- ecule i relative to the mean orientation p (Fig. 1B), mission, for crossed polarizer and analyzer at 45°
nant biaxial ordering on the surfaces of internally Pm is the molecular polarization density, and to z, by T(y) = sin2[pdn(y)d/l], determined by
uniaxial films. 〈cosfi〉 is the polarization orientation order param- the resulting effective birefringence dn(y) ≡ nz –
The electrical and optical responses of W586 eter, the first moment of fluctuations of orienta- neff (y), cell thickness d, and wavelength l. The
to an applied electric field, E, and surface tions of individual molecular bow planes bi about peaks in the T(y) data were used to extract the
interactions in planar-aligned ITO-on-glass cells the mean orientation p(y). Similarly, the in-plane dependence of y on applied voltage, y(v), under
were used to probe the azimuthal orientation and dielectric anisotropy is De = ep – eo = DemaxQ, the assumption that np – no is independent of y
P P +1
A A
z z
B planar SmAPF SmAPF
-1
-1 z
F
p
E = +10 V/ m 0 V/ m -10 V/ m
z G
Fig. 3. Transmitted light optical textures in white light of W586 between yellow). (E) Clean glass preparation with the LC sample ~1 mm thick and layers
treated glass plates viewed between crossed polarizer and analyzer, oriented parallel to the plates. Defects exhibit four-brush patterns between crossed
as indicated for all images. (A) Clean glass preparation with layers parallel to analyzer and polarizer, indicating a 2p reorientation of an optic axis about
the plates and LC layer ~1mm thick. Extinction indicates the uniaxial symmetry each defect core, and thus polar ordering in the SmAPF phase. (F) Freely
of the SmA phase, and the optical biaxiality of the SmAPF phase generates a suspended films with layers parallel to the image plane. DRLM images in the
Schlieren texture, periodically influenced by single smectic layer edge dis- SmAPF phase with oblique incidence and slightly uncrossed polarizers reveal a
locations. (B) Nylon films on glass give random-planar focal conics with the texture of brush patterns, confirming the biaxiality of the SmAPF phase. The
layers normal to the plates in a 5.0-mm-thick cell. At zero field, the bow-plane absence of +p or –p defects indicates that the in-plane order is locally polar.
director is nearly parallel to the glass plates, exhibiting smaller apparent bi- The –2p defect is broken into four domains of nearly uniform in-plane
refringence nz – np, whereas at E = T 10 V/mm the bow-plane director is nearly polarization about the defect core, a consequence of the space charge and
perpendicular to the glass plates, exhibiting larger apparent birefringence nz – no. associated electrostatic energy accompanying splay distortion of P. The +2p
Brushes aligned along analyzer/polarizer with or without field indicates the defect avoids splay of P by adopting the indicated bend-only orientation. This
SmA-like structures in both cases. (C) Teflon-rubbed films on glass give uni- suppression of splay of P also produces the thready texture of largely bend
form planar alignment with the layer normal z along the rubbing direction fluctuations in (F) and (G) (green circle). (G) Single-layer (N = 1) freely
(arrow) in both SmA and SmAPF phases in a 3.6-mm-thick cell. (D) Tilting the suspended film exhibiting equal intensity bright brushes emanating from a +2p
cell about z enables visualization of domains of opposite sign of y, shown defect viewed with crossed polarizer and analyzer, indicating an OPA normal
schematically in cross sections of the cell in the insets (glass plates shown in to the film.
birefringence (Δn-nz-neff)
nz - n exhibiting a sharp minimum at fij = 0 and a max-
mally incident white light. imum at fij = p. These features respectively give the
On cooling the SmAPF
0.10
n nz - np correct saturation behavior of P(T ) and yield the
phase, the birefringence observed Q(T) º P(T)2. (ii) SmA/SmAB/SmAPF
with field on, nz – no, v = 0V phase diagram. Using a mean-field Hamiltonian,
increases and the bire- light Radzihovsky, Weichman, and Park have calcu-
0.09
fringence without field, 0.8 _ lated the phase behavior of Bose-Einstein con-
nz – np, decreases, indi- 0.6
cos
(nz - n)A densates (BECs) across a Feshbach resonance,
cating a reduced fluctu-
ation in y, where y is
0.08 0.4 p showing that they can exhibit distinct normal
z fluid (NF), atomic superfluid (ASF), and molec-
the azimuthal orienta- 0.2
tion of the p-l plane. v(t) (Volts) o ular superfluid (MSF) phases (28). We argue that
0.07 0 this Hamiltonian is the same as that for our smec-
The insets show schemat- 0 1 2 3 4 5 6
ically the polarization tic system and use the NF/ASF/MSF phase di-
orientation in the cell SmAPF SmA agram to map that of the SmA/SmAb/SmAPF
(glass plates shown in phases, respectively (18). (iii) Landau-deGennes
polarization (nC/cm2)
yellow). The plot shows 400 P (LdG) Model. The BEC Hamiltonian reduces to
cosy versus the cell volt- n a LdG expansion in the scalar order parameters P
age v(t) in the SmAPF and Q (18). Application of this expansion to the
phase. The linear depen- 300 SmAPF phase describes the SmAPF well, giving
B
dence of v(t) on cosy the dotted black curve in Fig. 4B for P(T) as well
suggests a typical “V- as the required Q(T) º P(T)2.
200
shaped” reorientation of The MMF and LdG models agree well except
P (26, 27), a consequence in the transition regime, where the LdG gives a
of the total screening of second-order transition and the MMF a first-order
100
the applied voltage in transition. As mentioned above, we cannot dis-
the LC by the component tinguish these cases experimentally because, in
of P normal to the cell the cells studied, the measurement of P requires
plates. (B) The current as- 80 100 120 140
an applied field large enough to induce signifi-
sociated with field-induced temperature (°C) cant polarization near the transition (fig. S6).
polarization reorienta-
tion in the SmAPF phase (inset) exhibits a peak due to the analog reorientation of P, which was integrated
References and Notes
to give the macroscopic polarization P. The MMF model gives the red and magenta curves for Dn in (A) and 1. N. W. Ashcroft, N. D. Mermin, Solid State Physics
the red curve for P in (B) (18), and the dashed black curve is the LdG prediction (18).
pffiffiffiffiffiComparison
ffi pffiffiffi of the (Holt, Rinehart Winston, New York, 1978).
dependence of Dn( T ) (blue squares) and P(T ) (white squares) shows that P º Dn º Q is rather 2. M. Born, Sitzungsber. Konigl. Preuss. Akad. Wiss. 1916
well satisfied, a relationship shown by the models to indicate that P drives Q (18). (Jan.–July), 614 (1916).
3. T. Niori, T. Sekine, J. Watanabe, T. Furukawa, H. Takezoe,
J. Mater. Chem. 6, 1231 (1996).
4. D. R. Link et al., Science 278, 1924 (1997).
and that y is uniform through the cell thickness. Differential scanning calorimetry of the SmA to 5. H. Takezoe, Y. Takanishi, Jpn. J. Appl. Phys. 45, (2A),
This analysis shows that v(t) º cosy(t) (inset SmAPF transition shows a weak anomaly, indi- 597 (2006).
of Fig. 4A), just the result first obtained in the cating a second-order or weakly first-order tran- 6. R. A. Reddy, C. Tschierske, J. Mater. Chem. 16, 907 (2006).
“V-shaped” reorientation of P in high-polarization sition (fig. S9). 7. I. Wirth et al., J. Mater. Chem. 11, 1642 (2001).
8. Y. Shimbo et al., Phys. Rev. Lett. 97, 113901 (2006).
chiral SmC materials, shown to be a conse- The mean in-plane refractive index is shown 9. H. R. Brand, P. E. Cladis, H. Pleiner, Int. J. Eng. Sci. 38,
quence of the total screening of the applied voltage as nz – n (green line) in Fig. 4A. These data indi- 1099 (2000).
in the LC by the component of P normal to the cate a difference in nz – n and in np – no = Dn(T) º 10. T. Hegmann, J. Kain, S. Diele, G. Pelzl, C. Tschierske,
cell plates (26) and recently demonstrated in a Q(T) across the cross-hatched SmA–SmAPF tran- Angew. Chem. Int. Ed. 40, 887 (2001).
11. R. Pratibha, N. V. Madhusudana, B. K. Sadashiva, Science
SmCAPF bent-core phase (27). In this model, sition region, interestingly with no corresponding 288, 2184 (2000).
evt = 2dPcosy[v(t)], where e and d are respec- detectable discontinuity in L(T) there, even with 12. B. K. Sadashiva, R. A. Reddy, R. Pratibha, N. V. Madhusudana,
tively the dielectric constant and the thickness of high x-ray diffraction resolution (dd = 0.02 Å, Fig. J. Mater. Chem. 12, 943 (2002).
the insulating alignment layers on the electrode 1B), although L(T ) does go through a maximum 13. A. Eremin et al., Phys. Rev. E Stat. Nonlin. Soft Matter
Phys. 64, 051707 (2001).
plates. The ~12 V width of the 0° < y < 180° in the vicinity. Comparison of the T-dependence 14. R. A. Reddy, B. K. Sadashiva, J. Mater. Chem. 14, 310 (2004).
peaks is consistent with estimates of e and d and of Dn(T)pffiffiffiffiffi
and
ffi P(T ) shows thatpthe ffiffiffiffi relationship 15. S. T. Wang et al., Phys. Rev. E Stat. Nonlin. Soft Matter
the measured P (26). These observations pro- PðTÞº Dn and thus PðT Þº Q is rather well Phys. 70, 061705 (2004).
vide a self-consistent confirmation of the “block satisfied (Fig. 4B, blue and white squares, and 16. B. Glettner, S. Hein, R. A. Reddy, U. Baumeister,
C. Tschierske, Chem. Commun. (Camb.) 25, 2596 (2007).
polarization” mode of field-induced reorientation fig. S3). 17. C. Keith, M. Prehm, Y. P. Panarin, J. K. Vij, C. Tschierske,
of y (reorientation with y spatially uniform) and Several theoretical approaches were pursued Chem. Commun. (Camb.) 46, 3702 (2010).
enables the measurement of nz – no (at y = 0°) to understand these data and to guide exploration 18. Materials and methods are available as supporting
material on Science Online.
and nz – np (at y = 90°), shown in Fig. 4A. The of other novel phase behavior (18), for example,
19. W. K. Robinson, C. Carboni, P. Kloess, S. P. Perkins,
magnitude P(T) is determined by integrating the the SmAb and polarization splay modulated phases: H. J. Coles, Liq. Cryst. 25, 301 (1998).
polarization current peak in Fig. 4B. Behavior (i) Variational molecular mean-field (MMF) XY 20. R. B. Meyer, B. Stebler, S. T. Lagerwall, Phys. Rev. Lett.
in the vicinity of the SmA to SmAPF transition Model. The P(T ) and Q(T ) data were fit to a 41, 1393 (1978).
21. R. Pindak, C. Y. Young, R. B. Meyer, N. A. Clark,
(red crosshatched area, Fig. 4) is difficult to assess generalized 3D XY lattice model with a nearest- Phys. Rev. Lett. 45, 1193 (1980).
because the field required to measure P itself in- neighbor interaction potential U(fij) expressed as 22. D. R. Link, J. E. Maclennan, N. A. Clark, Phys. Rev. Lett.
duces a substantial polarization (fig. S5) (18). an expansion in circular harmonics in fij = fj – fi 77, 2237 (1996).
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23. D. R. Link, N. Chattham, J. E. Maclennan, N. A. Clark, 28. L. Radzihovsky, P. B. Weichman, J. I. Park, Ann. Phys. Supporting Online Material
Phys. Rev. E Stat. Nonlin. Soft Matter Phys. 71, 021704 323, 2376 (2008). www.sciencemag.org/cgi/content/full/332/6025/72/DC1
(2005). 29. D. M. Walba et al., Science 288, 2181 (2000). Materials and Methods
24. P. M. Johnson, S. Pankratz, P. Mach, H. T. Nguyen, 30. This work was supported by NSF Materials Research SOM Text
C. C. Huang, Phys. Rev. Lett. 83, 4073 (1999). Science and Engineering Center grant DMR 0820579, Figs. S1 to S9
25. M. Nakata et al., Liq. Cryst. 28, 1301 (2001). NSF grant DMR 0606528, NSF grant DMR 0603223, and
References
26. N. A. Clark, D. Coleman, J. E. Maclennan, Liq. Cryst. 27, NASA grant NAG-NNC04GA50G. Use of the National
985 (2000). Synchrotron Light Source was supported by the U.S.
27. M. J. O’Callaghan, M. D. Wand, C. M. Walker, M. Nakata, Department of Energy, Divisions of Materials and 2 September 2010; accepted 15 February 2011
Appl. Phys. Lett. 85, 6344 (2004). Chemical Sciences. 10.1126/science.1197248
Heavily Doped Semiconductor for color center impurities (12) and magnetic
impurities, notably Mn atoms (13, 14), thereby
providing insight into the challenging chemistry
Nanocrystal Quantum Dots (15). The introduction of dopant precursors at
specific stages of nanoparticle growth has been
David Mocatta,1,2 Guy Cohen,3 Jonathan Schattner,2,4 Oded Millo,2,4* Eran Rabani,3* Uri Banin1,2* effective in controlling the impurity location (16).
More recently, some progress has been made to-
Doping of semiconductors by impurity atoms enabled their widespread technological application in ward producing n-type CdSe quantum dots (QDs)
microelectronics and optoelectronics. However, doping has proven elusive for strongly confined through the use of tin and indium impurities
colloidal semiconductor nanocrystals because of the synthetic challenge of how to introduce single (17, 18), and Cu impurities have been used to
impurities, as well as a lack of fundamental understanding of this heavily doped limit under strong produce p-type InP NCs (19).
quantum confinement. We developed a method to dope semiconductor nanocrystals with metal Here, we describe a simple room-temperature
impurities, enabling control of the band gap and Fermi energy. A combination of optical method for doping semiconductor NCs with metal
measurements, scanning tunneling spectroscopy, and theory revealed the emergence of a confined impurities. By changing the dopant type and con-
impurity band and band-tailing. Our method yields n- and p-doped semiconductor nanocrystals, centration, we achieved exquisite control of the
which have potential applications in solar cells, thin-film transistors, and optoelectronic devices. electronic properties, including the band gap and
Fermi energy. We conducted experimental and
oping of bulk semiconductors, the pro- injection, has been shown to yield n-type doping theoretical studies of the role of strong quantum
OD
ture of the quantum-confined states (shown for
n-type doping in Fig. 1B). In this case the addi-
OD
tion of a single dopant (left frame) introduces 900 1000 1100 1200
impurity levels that significantly alter the DOS— Wavelength
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S1 and S2 for individual spectra). No consider- similar to the undoped QD, consistent with the contrast, for the Ag-doped case, the Fermi level
able bleaching effects were observed in the ab- optical measurements. However, the features in is much closer to the onset of the valence band
sorption. The amount of impurities on the NCs the scanning tunneling spectroscopy (STS) spec- states, signifying p-type doping in this case.
was estimated by the analytical method of induc- tra are washed out, suggesting that indeed Au Considering that the only difference between
tively coupled plasma atomic emission spectros- has entered the QD, perturbing the pristine level the samples is the type of impurity atoms, and
copy (ICP-AES, figs. S3 to S7). structure. More notable changes are seen for that the measurements are carried out under the
A first possible source of spectral shifts in both the Cu and Ag cases (Fig. 3, upper panel), same conditions, surface ligand effects or envi-
such quantum confined particles may be related where band-tailing into the gap and the emer- ronmental influences on the Fermi energy shifts
to size changes upon doping, but this was ex- gence of in-gap states in regions covering nearly (4, 9, 11, 28) can be ruled out.
cluded by detailed sizing analysis (fig. S9). An 40% of the gap region are observed. In partic- Chemical considerations for the doping of
alternative source of the spectral shifts can be as- ular, in the Cu case, a shoulder on a tail-state InAs with the different metal atom impurities can
sociated with electronic doping by the impurities. structure is seen at bias values just below the 1Se help to clarify these observations (fig. S17). Cu
In Fig. 3 we show tunneling spectra measured doublet (which is remarkably preserved). Addi- can have a formal oxidation state of either +1
by a scanning tunneling microscope (STM) at tionally, the doublet is superimposed on a nota- or +2. Moreover, its ionic radius is the smallest
T = 4.2 K for undoped, Au-doped, Cu-doped, ble rising background that increases to the region of the three impurities and therefore may be ac-
and Ag-doped InAs QDs 4.2 nm in diameter of the 1Pe peaks that are not well resolved (fig. commodated in interstitial sites within the InAs
(see figs. S13 to S15 for additional spectra). S13). For the Ag-doped QDs, there is pronounced lattice (29). In such a case, one can expect that
Starting from the reference case of the undoped broadening and merging of features on the the Cu will partly donate its valence electrons
QD shown in the lower panel, the dI/dV curves, positive-bias side, and on the negative-bias side to the QD, leading to n-type doping, consistent
which are proportional to the DOS, match earlier a background signal develops. with the shift in the Fermi energy observed by
studies of InAs QDs (27). The gap region is A clear result of doping in bulk semi- STS. The incorporation of multiple impurities
clearly identified, whereas on the positive-bias conductors is the shift of the Fermi level, which is expected to lead to the development of closely
side a doublet of peaks associated with tunnel- for n-type doping is close to the conduction band, spaced impurity states, akin to the impurity band
ing through the doubly degenerate 1Se state is and conversely shifts to a lower energy close to formed in the bulk (20). This band forms asym-
seen at the onset of the current, followed by a the valence band for p-type impurities. Remark- metrically because of the disordered arrangement
higher-order multiplet at higher bias correspond- ably, such shifts are clearly identified in the STS of the impurities in the QD, surpassing the energy
ing to tunneling through the 1Pe conduction band of the Cu- and Ag-doped QDs, as measured by of the 1Se QD state. The observed rising back-
state. A more complex peak structure is seen the positions of the band edges relative to zero ground in the STS curve signifies the presence
on the negative-bias side, resulting from tun- bias. Whereas the Fermi energy for the undoped of such an impurity band. This is a direct in-
neling through the closely spaced and intricate case, as well as the Au-doped case, is nearly cen- dication of the substantial modification of the
valence band states. tered, in the Cu-doped case the onset of the DOS induced by the impurities in small, heavily
Several changes are seen upon doping the conduction band states nearly merges with the doped QDs. Revisiting the observed blue shift
QDs. Starting with the case of Au, the gap is Fermi energy, consistent with n-type doping. In in the absorption, this is in line with the filling
of the conduction and impurity-band levels in
heavily n-type doped QDs, leading to a Moss-
Fig. 3. The effect of doping on Burstein blue shift in the absorption spectrum
the STM tunneling spectra. Four and minor shifts in the emission (Fig. 2). Fur-
dI/dV versus V tunneling spectra thermore, the addition of impurity levels explains
at 4.2 K, of undoped (black trace), the negligible bleach in the absorption with dop-
Au-doped (green trace), Cu-doped ing, in contrast to remote surface doping in which
(blue trace), and Ag-doped (red QD state filling by the contributed charges leads
trace) InAs nanocrystals, nominally to a bleach (9–11).
4 nm in diameter. The doped QDs
Ag has a large radius and is considered to be
were taken from samples that had
a substitutional impurity in III-V semiconduc-
Ag, Cu, and Au atom/QD ratios
corresponding to 15, 160, and tors (30). The replacement of an In atom, which
77, respectively. The vertical (V = possesses three valence electrons, with a Ag
0) dashed line is a guide to the atom, which has only one valence electron, leads
eye, highlighting the relative to an electron deficiency in the bonding orbitals,
shifts of the band edges in the causing p-type doping. This is reflected in the
doped samples in manner typical shift of the Fermi level, as seen in the STS data
of p-doped and n-doped semi- (Fig. 3, red trace). In this case, the rising back-
conductors for the Ag-doped and ground in the spectrum at negative bias indicates
Cu-doped nanocrystals, respec- the formation of an impurity band near the valence
tively. The inset shows an STM band. Because Ag has the largest ionic radius of
image of a single (Ag-doped) QD the three impurities, it distorts the crystal struc-
on which STS data were measured. ture more than the others; this results in band-
tailing analogous to the Urbach tail known for
heavily doped bulk semiconductors, and leads
to the red shifts observed in the absorption onset
as well as the emission (Fig. 2). Au may adopt a
+3 valence state, which makes it isovalent with
In, and hence doping is not expected to lead to
the introduction of charge carriers. Moreover, its
size is comparable to that of In (table S1), allow-
ing for substitutional doping without substantial
Fig. 4. The effect of doping on the electronic structure of nanocrystals. (A-D) localization (a/R). Dashed curve is the result of the Z-model. (D) Experimental
Impurity band formation. (A) The impurity DOS from the TB model (a = 0.4 nm) spectral shifts for Cu doping as a function of N for several QD sizes. (E to H)
for different levels of n-type doping for R = 2 nm (solid curves) and R = 1.3 nm Band tailing in doped nanocrystals. (E) DOS of an In140As141 QD for three levels
(dotted-dashed curves). (B) The spectral shifts as a function of the inverse QD of doping, expressed as a percentage of displaced In atoms. (F) Shifts in gap as a
size for n-type (solid curves) and p-type (dotted curves) doping for different function of N relative to the number of In atoms (NIn) in the NC for different
numbers of impurities. The InAs levels were calculated from an effective mass ways of introducing structural disorder. (G) Calculated shifts induced by band-
model. The impurity levels were calculated from the TB model with a = 0.4 nm. tailing for several QD sizes. (H) Measured spectral shifts for Ag-doped QDs for
(C) Spectral shifts for n-type doping, as a function of the number of impurities N several QD sizes. We used a normal distribution to induce disorder with a width
in units of the onsite energy in the tight binding model, e, for several levels of that is 10% the In-As bond length [see (26) for more details on the calculations].
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doped semiconductors relates to distortions of the narrowing agree with atomistic electronic struc- 19. R. Xie, X. Peng, J. Am. Chem. Soc. 131, 10645
crystal structure by the dopants leading to band- ture calculations incorporating structural dis- (2009).
20. R. A. Abram, G. J. Rees, B. L. H. Wilson, Adv. Phys. 27,
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role of band-tailing we employed an atomistic introduction of Au impurities as a substitutional 21. J. Tauc, Ed., Amorphous and Liquid Semiconductors
treatment of the electronic structure of the QD, dopant, although broadening the STS spectra, (Plenum, London, 1976).
where disorder was introduced by randomly dis- maintains the position of the Fermi level and 22. N. Porras-Montenegro, S. T. Perez-Merchancano, A. Latge,
J. Appl. Phys. 74, 7624 (1993).
placing In or As atoms (26). Band-tailing occurs does not lead to spectral shifts, in line with its 23. S.-S. Li, J.-B. Xia, J. Appl. Phys. 101, 093716
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we estimate the shifts in the band gaps induced (2003).
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310, 462 (2005). 32. We thank the staff of the Unit for Nanocharacterization
sistent with its larger ionic radii. 4. D. V. Talapin, C. B. Murray, Science 310, 86 (2005). of the Center for Nanoscience and Nanotechnology in
In Fig. 4, G and H, we show the calculated 5. D. J. Norris, A. L. Efros, S. C. Erwin, Science 319, 1776 the Hebrew University, Jerusalem, headed by I. Popov,
and measured shifts (for Ag impurities) for sev- (2008). as well as V. Gutkin for help in the XPS studies.
eral QD sizes as a function of the dopant con- 6. D. Turnbull, J. Appl. Phys. 21, 1022 (1950). Supported by a grant from the European Research
7. G. M. Dalpian, J. R. Chelikowsky, Phys. Rev. Lett. 96, Council under the European Community’s Seventh
centration, respectively. The striking similarities 226802 (2006). Framework Programme (FP7/2007-2013)/ERC grant
between the theory and experiments suggest that 8. T. L. Chan, M. L. Tiago, E. Kaxiras, J. R. Chelikowsky, agreement 203413 (U.B.); the Israel Science Foundation
the spectral shifts observed in Ag, unlike the Nano Lett. 8, 596 (2008). (O.M.); Seventh Framework Programme Marie Curie
case of Cu, are dominated by band-tailing, al- 9. M. Shim, P. Guyot-Sionnest, Nature 407, 981 (2000). International Outgoing Fellowships for Career
10. C. Wang, M. Shim, P. Guyot-Sionnest, Science 291, 2390 Development project Hierarchical Junction Solar Cells
though clearly in both cases there is an interplay (2001). (E.R.); the Harry de Jur Chair in Applied Science (O.M.);
between band tailing and the impurity band 11. D. Yu, C. J. Wang, P. Guyot-Sionnest, Science 300, 1277 the Alfred and Erica Larisch Memorial Chair (U.B.); an
formation. Both theory and experiments show (2003). Azrieli Foundation fellowship (G.C.); and the Centre for
a rapid increase in the magnitude of the shift, 12. N. Pradhan, D. Goorskey, J. Thessing, X. Peng, Scientific Absorption, Ministry of Absorption, State of
J. Am. Chem. Soc. 127, 17586 (2005). Israel (D.M.).
reaching a plateau at high dopant concentra-
13. R. N. Bhargava, D. Gallagher, X. Hong, A. Nurmikko,
tions. The increase in the shift depends on the Phys. Rev. Lett. 72, 416 (1994).
level of disorder induced by each dopant. Fur- 14. C. A. Stowell, R. J. Wiacek, A. E. Saunders, B. A. Korgel,
Supporting Online Material
www.sciencemag.org/cgi/content/full/332/6025/77/DC1
thermore, the shifts decrease with increasing QD Nano Lett. 3, 1441 (2003).
Materials and Methods
size in both cases. We note that in Cu, although 15. S. C. Erwin et al., Nature 436, 91 (2005).
Figs. S1 to S24
16. Y. Yang, O. Chen, A. Angerhofer, Y. C. Cao,
a contribution of band-tailing is also possible, the J. Am. Chem. Soc. 128, 12428 (2006).
Table S1
band-filling effect discussed above dominates, References
17. C. Tuinenga, J. Jasinski, T. Iwamoto, V. Chikan, ACS Nano
leading to the blue shift in that case. 2, 1411 (2008). 10 August 2010; accepted 10 February 2011
Doping semiconductor NCs with metal im- 18. S. Roy et al., J. Phys. Chem. C 113, 13008 (2009). 10.1126/science.1196321
purities provides further means to control their
optical and electronic properties. We developed
a synthesis for n- and p-type doped InAs NCs
by introducing Cu and Ag impurities, respec- Electrochemically Mediated Atom
tively. Cu-doped particles showed a blue shift
in the absorption with only small bleaching.
This is in line with the increased DOS, which
Transfer Radical Polymerization
results from the addition of new impurity levels Andrew J. D. Magenau,1 Nicholas C. Strandwitz,2 Armando Gennaro,3 Krzysztof Matyjaszewski1*
that develop into an impurity band, and their
partial filling with electrons from interstitial Cu
Atom transfer radical polymerization is a versatile technique for exerting precise control over
impurities. Correspondingly, the STS measure-
polymer molecular weights, molecular weight distributions, and complex architectures. Here, we
ments show a shift in the Fermi energy to near
show that an externally applied electrochemical potential can reversibly activate the copper
the conduction band edge, and the development
catalyst for this process by a one-electron reduction of an initially added air-stable cupric
of a confined impurity band. This behavior was
species (CuII/Ligand). Modulation of polymerization kinetics is thereby tunable in real time by
rationalized by a TB model, and its size de-
varying the magnitude of applied potential. Application of multistep intermittent potentials
pendence indicates that the confinement leads to
successfully triggers initiation of polymerization and subsequently toggles the polymerization
localization of the impurity states in small NCs.
between dormant and active states in a living manner. Catalyst concentrations down to 50 parts
Conversely, STS measurements of Ag-doped
per million are demonstrated to maintain polymerization control manifested in linear first-order
NCs led to a shift of the Fermi energy toward
kinetics, a linear increase in polymer molecular weight with monomer conversion, and narrow
the valence band, proving p-type doping. This
polymer molecular weight distributions over a range of applied potentials.
was accompanied by a red shift of both ab-
sorption and emission peaks, attributed to band-
iving polymerizations, introduced in 1956 events, while concurrently maintaining instanta-
L
tailing effects analogous to the Urbach tail, in
line with Ag adopting substitutional sites. The by Szwarc (1), proceed in the absence neous initiation and uniform growth of each prop-
magnitude and size dependence of the band of chain termination and chain transfer agating species (2). Processes of this nature allow
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of any redox process that might interfere with stability of the CuIBr/Me6TREN catalyst and ade- Eapp from –0.69 V to –0.40 V. The first of these
the catalyst reduction (fig. S1A). After con- quate mass transport to the working electrode. potentials favors formation of CuI at the elec-
firming the stability of the reaction medium, we Upon application of a –0.69 V potential, which trode and hence triggers an active state, whereas
acquired an additional CV in the presence of corresponds to the E1/2 of the CuII/CuI couple, the second potential, being more positive than
added CuIIBr2/Me6TREN to identify the poten- rapid consumption of monomer occurred, reach- E1/2, favors CuII and leads to a dormant state. In
tial window appropriate for accurate manipula- ing nearly 80% conversion within 2 hours (Fig. the first hour of polymerization, no potential
tion of the oxidation states of our redox-active 2A). Linear first-order kinetic behavior was ob- was applied and as a result no monomer con-
catalyst in electrolysis experiments. The copper served during the polymerization, indicating a version occurred, confirming the necessity of an
catalyst couple (CuII/CuI) was observed to have constant concentration of propagating species (fig. Eapp to trigger polymerization (Fig. 4A). Upon
an E1/2 = –0.69 V versus Ag+/Ag (–0.77 V ver- S2), and an excellent correlation persisted be- switching the potential to –0.69 V, 10% mono-
sus Fc+/Fc) (fig. S1B). Upon addition of the tween theoretical and experimental molecular mer conversion was observed after ~24 min,
alkyl halide initiator, the CV changed due to weight values as the polymerization progressed at which point the potential was switched to
regeneration of CuIIBr2/Me6TREN by reaction (Fig. 2B). Molecular weight values increased lin- –0.40 V. Once this potential change occurred,
of the electro-generated CuIBr2/Me6TREN com- early with conversion, and molecular weight dis- the polymerization slowed and then halted,
plex with ethyl 2-bromopropionate (EBP) (fig. tributions decreased gradually with increasing achieving ~2% monomer conversion in the first
S1B). This process is similar to homogeneous monomer conversion, reaching a minimum value 25 min and a negligible amount over the follow-
redox catalysis (34): The CuIBr2/Me6TREN gen- of approximately Mw/Mn = 1.06. Furthermore, ing 20 min. The response time for deactivation
erated at the electrode reacts in solution to reduce gel permeation chromatography (GPC) depicted was on average ≤20 min, whereas a polymer-
EBP; a portion of the CuIIBr2/Me6TREN thus monomodal distributions of polymeric species ization could be revived in less than 15 min in
regenerated returns to the electrode to be re- and a clear shift to larger molecular weight values the early stage of polymerization. This potential
duced again. The cathodic current is thereby with increasing conversion (Fig. 3). cycle was then repeated for three additional cy-
enhanced, because reduction involves more than The rate of ATRP is defined by the ratio of cles, resulting in an increased monomer conver-
one-electron/molecule, whereas the anodic cur- [CuIBr2/Me6TREN] and [CuIIBr2/Me6TREN] sion to 28, 44, and then to 62% during active
rent decreases, because CuIBr2/Me6TREN is and therefore depends on the extent to which periods. This behavior manifests characteristics
partially oxidized in solution. CuIIBr2/Me6TREN is reduced and consequently of a living polymerization with regard to effi-
Electrolysis of CuIIBr2/Me6TREN was then car- the Eapp (3). Two additional and separate polym- cient reinitiation of chain ends, owing to the
ried out over a range of 60 mV, between –0.66 and erizations were conducted with a 30-mV increase preserved chain-end functionality. Throughout
–0.72 V, designed to probe the influence of applied or decrease of the Eapp to –0.72 and –0.66 V, the cycling process, molecular weight values cor-
potential (Eapp). The cell was filled with ~12 mL of respectively. An enhanced polymerization rate related strongly with their theoretically prede-
a 1:1 MA/MeCN (v/v) mixture containing 0.1 M was observed at more negative potentials, where- termined values, and low Mw/Mn values were
electrolyte formulated with the following molar as more positive potentials provided a slower rate maintained (Fig. 4B). Clustering of data points in
ratios [MA]0:[EBP]0:[Me6TREN]0:[CuIIBr2]0 = of polymerization (Fig. 2A). Initial slopes in the the dormant periods is visible in Fig. 4B, where-
500:1:0.025:0.025. Electrolysis studies were car- first-order kinetic plots revealed an approximate as the molecular weight was shown to increase
ried out in a two-compartment cell fitted with rate enhancement by a factor of 2.4 by adjusting progressively with conversion during active pe-
platinum mesh working and counter electrodes, the Eapp from –0.66 V to –0.72 V (fig. S2). In all riods when a sufficient Eapp was imposed. Clear
and a silver ion/silver (Ag+/Ag) reference elec- cases, similar correlations between theoretical and shifts to higher molecular weight were observed
trode, as illustrated in Fig. 1B. The counter elec- experimental molecular weights were observed, by GPC (fig. S5) without any substantial lower
trode was always separated by a glass frit from and narrow molecular weight distributions were molecular weight fraction, confirming near quan-
the working electrode compartment, where po- maintained even with enhanced polymerization titative reinitiation of poly(methyl acrylate) halo-
lymerization occurs, to avoid oxidation of CuI rates (Fig. 2B and figs. S3 and S4). gen chain ends.
and/or contamination of the working solution by Feasibility of an electrochemical switch to Thus, we demonstrated a successful and well-
oxidation products arising from the anodic pro- modulate copper oxidation states in situ, and controlled eATRP of MA in MeCN. The eATRP
cess. An inert atmosphere and rapid stirring were thereby activate or deactivate polymerization, system is currently being extended to a larger
maintained for the reaction duration to ensure was demonstrated by repetitive stepping of the range of monomers, media, and synthesis of var-
ious copolymers with complex architectures.
A B
n, theo
Fig. 2. (A) Monomer conversion with respect to time and (B) number average molecular weight
(Mn) and Mw/Mn (where Mw is weight average molecular weight) with respect to conversion as a
function of applied potential. Polymerizations were conducted in 50% (v/v) MA in MeCN at 25°C, Fig. 3. Evolution of molecular weight with mono-
with a total reaction volume of ~12 mL. [MA]0 = 5.55 M; [MA]0:[EBP]0:[Me6TREN]0:[CuIIBr2]0 = mer conversion at –0.69 V versus Ag+/Ag, mea-
500:1:0.025:0.025. sured by gel permeation chromatography.
1
he characteristic landforms and large relief change, topography, and tectonic processes. Most
T
Berkeley Geochronology Center, 2455 Ridge Road, Berkeley,
of many alpine landscapes indicate that quantitative studies of glacial landscape evolution CA 94709, USA. 2Department of Earth and Planetary Science,
the effect of glacial erosion over the past rely on model simulations that calculate glacial University of California, Berkeley, CA 94720, USA. 3Depart-
ment of Geography, University of California, Berkeley, CA
~2.5 million years (My) has been profound (1, 2). erosion from poorly validated parameterizations 94720, USA.
Understanding how this erosion progressed at the [e.g., (3, 4)]. Alternatively, direct observational *To whom correspondence should be addressed. E-mail:
landscape scale over millions of years is essential constraints could reveal the evolution of topogra- dshuster@bgc.org
for analyzing the connections between climate phy and so guide model development [e.g., (5–7)]. ‡These authors contributed equally to this manuscript.
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ally steep walls. The examined valleys are incised account for the effects of both surface erosion logical change, we calculated evolving temperatures
into strong plutonic rocks, primarily of the Arthur and rock uplift, we interpreted our data in the over the past 4.0 My for the three regions de-
River and Darran complexes (9). Mean slopes of context of a three-dimensional thermokinematic limited by white boxes in Fig. 1. Each calculation
valley sides and cirque headwalls commonly finite-element model for subsurface temperature began at a steady state. We recorded the time
exceed ~45° over horizontal and vertical scales of evolution (13). series of temperatures along the particle paths
~1.5 km. The dominant wavelength and relief of This model allowed us to prescribe both the leading to our sample sites on the modern sur-
the regional surface topography are ~4 km and surface topography and the rock uplift as ar- face. From such cooling histories, we calculated
~2 km, respectively (Fig. 1). This region current- bitrary functions of time and space. The sum of model (U-Th)/He ages and model 4He/3He release
ly receives abundant precipitation (>6 m/year) surface lowering and rock uplift then determined spectra as a function of sample characteristics
and lies along a tectonically active plate bound- exhumation, the primary control on thermal his- (14); these results were compared to observations
ary. Oblique convergence of the Australian and tories. Uplift was assumed to be spatially uniform (8). We sought models that could simultaneously
Pacific plates, the source of mountain uplift, began and steady, although we explored the effect of reproduce the key features of the data: the min-
about 6 My ago (10). Convergence has been ac- time-varying uplift rate in some sensitivity tests (8). imum of ages at cirque-floor elevations and the
commodated primarily by deformation of weaker Using a variety of topographic histories, de- very steep age-elevation gradients on the sides of
crust east of the Fiordland block. signed to represent idealized styles of morpho- trunk valleys and at some valley heads.
Comparing measured apatite (U-Th)/He ages
(8) to elevations for all sample sites reveals a
broadly crescentic pattern (Fig. 2A); the youngest
ages, ~1 My, generally occur at cirque floor ele-
vations (~500 to 700 m), whereas older ages
occur both at sea level (where ages approach
~2 My) and on summits (~2.5 My). This crescent-
shaped age/elevation relationship appears in mul-
tiple valley systems, some of which drain NW from
the main divide (to Milford Sound) and others to
the SE (inland to Lake Te Anau). With one ex-
ception, all median (U-Th)/He ages are <2.5 My.
Thus, these data primarily reflect processes active
in the Pleistocene. The similarity between lon-
gitudinal age/elevation relationships of individual
valleys (Fig. 2, B to D) and the regional age/elevation
relationship (Fig. 2A) suggests both a consistent
pattern of valley development across the region
and an absence of localized tectonic influences on
the age patterns (8).
We also analyzed samples using 4He/3He ther-
mochronometry (8). Unlike (U-Th)/He ages, which
are calculated from the total abundance of ra-
diogenic 4He relative to U and Th, the 4He/3He
method constrains the spatial distribution of 4He
within an apatite crystal via controlled stepwise
degassing of samples containing synthetic proton-
induced 3He (11). Such information delimits a
sample’s continuous cooling history through the
temperature range ~80° to ~20°C (12). The cool-
ing history, in turn, reveals aspects of topographic
development not captured by the He ages alone.
Thermal histories derived from 4He/3He ther-
mochronometry differ greatly across the land-
scape, even over small distances (Fig. 1). At the
head of the North Branch Cleddeau valley, for
example, rocks at the floor of an 1100-m-deep
cirque cooled continuously over the past ~1 My,
from temperatures of ~75° to 110°C to the present
surface temperature (Fig. 1D). In contrast, rocks
currently at the ridge crest resided at tempera- Fig. 1. Modern Fiordland topography and sample locations, together with cooling constraints from
tures <25°C throughout this time interval. Super- apatite 4He/3He thermochronometry. (A) Topography and bedrock sample locations; red denotes cirque-
ficially, these results suggest that much of the floor samples. White rectangles outline model domains (see Figs. 3 and 4). (B to G) Cooling paths from
cirque relief developed over the past ~1 My. In 4
He/3He thermochronometry of select samples from the North Branch Cleddeau [(B) to (D)] and the Neale
this landscape of closely spaced valleys and high Burn drainages [(E) to (G)]. The colored sets of randomly generated cooling paths predict each observed
relief, however, the geothermal gradient depends (U-Th)/He age to within analytical uncertainty (T1s); the gray paths do not. Yellow and red paths are
strongly on position in the landscape; different progressively inconsistent, respectively, with the 4He/3He data (figs. S1 and S2), whereas green paths are
thermal histories are expected at different sites, most consistent (12). Cooling paths shown as solid black curves were predicted from the topographic
even if topography and mean exhumation rate evolution models shown in Figs. 3 and 4; the dashed black curves are predictions for steady-state
were steady. To disentangle these factors, and to topography, from models calibrated to match lowest-elevation samples (Fig. 2).
Fig. 2. Observed and modeled apatite (U-Th)/He ages and elevation re- along the axis of the Neale Burn drainage (NB15, NB16, NB18, NB21, NB04,
lationships. (A) Observations for all Fiordland sample sites (Fig. 1). Both ob- and NB01), and (F) from its southern valley-wall transect (NB15, NB14, NB13,
servations and modeled values are shown within (B) the North Branch Cleddeau, and NB12). To illustrate patterns, all models were calibrated to match the lowest-
(C) the North Clinton, and (D to F) the Neale Burn drainages. Small black points elevation sample; relative performance of the models is not sensitive to this
are individual crystal ages; triangles and horizontal lines are the median age and choice (8). Open diamonds represent a proportional decrease in relief from 2.5
range, respectively, observed for each sample. Squares are model ages predicted My ago to the present; fig. S3A shows the corresponding longitudinal profile
for the transient topographies illustrated in Figs. 3 and 4, calculated following evolution. The open downward triangles represent a continuous transition from a
(13) and (14), using each sample’s crystal dimensions and U and Th con- linear longitudinal profile (2.5 My ago) to the modern form; fig. S3B shows the
centrations. Open circles are model ages calculated instead with steady-state profile evolution. The open upward triangles represent an extreme transition,
(modern) topography. By adjusting free parameters, steady-state models can between 1.75 and 0.75 My ago, from a 3-km plateau to the modern form; fig.
match a subset of samples (the lowest-elevation ones in this case) but not all. S3C shows the profile evolution. MF is a misfit statistic calculated from the error-
Predicted ages from three alternative model classes are shown in (E) for samples weighted differences between predicted and observed (U-Th)/He ages (8).
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Fig. 3. Best-fit transient topographic scenario of headward erosion propagation (erosion rate minus uplift rate) along the profile, calculated for the preceding
along the Neale Burn drainage (domain outlined in Fig. 1). (A to C) The input 250,000 years of each model time frame. (G) to (I) Model longitudinal profile
topography at three representative model times (1.75, 1.25 and 0.75 My before evolution from 2.5 My ago to the present in 250,000-year intervals; red profiles
the present, respectively). White points indicate sample locations, and white curves correspond to time frames shown in (A) to (C). The high-elevation surfaces may
locate the longitudinal profiles shown in (D to I). (D) to (F) The local lowering rate represent the level of valley bottoms beneath a nearly isothermal relief.
Fig. 4. Best-fit transient topographic scenarios of the North Branch Cleddeau and models involve headward propagation of erosion along the longitudinal profile
the North Clinton drainages. (A and B) The input topography shown at 1.00 My of each valley: the North Cleddeau (C and E) and the North Clinton (D and F).
before the present for the model domains outlined in Fig. 1. As in Fig. 3, these Panels and curve colors are as in Fig. 3.
T
1
Department of Geology, University of Maryland, College Park,
spreading centers induces upwelling and (4, 5). Broad regions of low seismic velocity de- MD 20742, USA. 2Department of Geology and Geophysics,
melting of underlying mantle peridotite. tected under ridges imply that the mantle is rel- Woods Hole Oceanographic Institution, Woods Hole, MA 02543,
The buoyant magmas rise through the mantle and atively impermeable with a porosity of ~0.02 (4). USA. 3Western Australian Geothermal Centre of Excellence, The
University of Western Australia, Crawley, Australia. 4Advanced
are focused toward the ridge axis, forming new However, geochemical data on mid-ocean ridge Photon Source, Argonne National Laboratory, Argonne, 60439,
oceanic crust (1, 2). Although up to 20% of the basalts (MORBs) indicate that once magma is USA.
original peridotite may melt in this manner (3), formed, it segregates very efficiently from the re- *To whom correspondence should be addressed. E-mail:
melt extraction is efficient enough that only 1 to sidual peridotite (6, 7). In particular, U-series di- wzhu@umd.edu
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(2D) images of melt distribution. Relying on 2D aries (Fig. 1, C and D). At f = 0.05, melt recedes predictions (12, 13); the melt network is dom-
microstructure to infer quantitative information on from grain boundaries and resides primarily inated by channels along triple junctions at the
3D melt connectivity inevitably introduces am- along triple junctions (Fig. 1B). At f = 0.02, edge of grains, which terminate at the junction
biguity (14–17), especially at low melt fractions. while melt films are observed along a small num- between four grains. At f = 0.02, nodes with
Several studies, based on 2D microstructure, indi- ber of grain boundaries, consistent with previous coordination numbers of 1 or 3 are more abun-
cate the existence of interconnected triple junctions 2D melt distribution studies (15), a network of dant than nodes with coordination 4, which is
of melt down to 1% (16, 17). Melt connectivity directly interconnected melt channels is evident likely an artifact of resolution limits; a detailed
can also be determined experimentally on analog (Fig. 1A). Although our imaging techniques can- examination of the melt network reveals that a
systems (18, 19) but with the caveat that the ap- not resolve melt films down to nanometer thick- large number of melt channels are identified
plicability to olivine-basalt systems is unknown. ness (15), the existence of an interconnected only intermittently by the skeletonization algo-
To overcome the limitations of 2D data, we network of melt channels in all our samples im- rithm and appear broken. The abundance of nodes
characterized the 3D melt distribution in experimen- plies that permeability of the olivine-basalt sys- with coordination numbers of 3 in samples with
tally produced olivine-basalt aggregates (20) using tem is unlikely to deviate considerably from the f = 0.10 and 0.20 represents the limitation of
x-ray synchrotron microtomography. This nonde- power-law permeability-porosity relationships the skeletonization algorithm in separating melt
structive imaging technique has a spatial resolution (13, 19), even at f = 0.02. channels within the large melt pool at grain cor-
of 0.7 mm, allowing us to image melt distribution The connectivity of the melt network was ana- ners (21). Notwithstanding these artifacts, our
at low melt fractions and to characterize melt lyzed with a skeletonization algorithm that sys- data show little evidence for isolated triple junc-
distribution over a large representative volume. tematically reduces cross sections orthogonal to tions where melt films dictate the melt connec-
The 3D reconstructions reveal that melt chan- melt channels to their center points. The lines at the tivity from 0.02 to 0.20.
nels form an interconnected network along grain center of melt channels and the nodes where these Because percolation through melt channels
edges at all melt fractions from 0.02 to 0.20 lines meet define the skeleton (21). Skeletons from along grain edges is more effective than through
(Fig. 1 and movie S1), in good agreement with all four samples demonstrate that melt in triple melt films along grain boundaries (22), the power-
theoretical predictions for isotropic systems junctions forms an interconnected network (Fig. 2). law relation between melt fraction and perme-
(12, 13). However, melt distribution in olivine- The coordination number—number of con- ability (13, 19) remains a good approximation
basalt aggregates is more complex than expected nections to neighboring nodes—of each node for olivine-basalt systems down to f = 0.02 and
in that the interconnected melt network is non- quantifies network connectivity (Fig. 3). At f = perhaps lower. In this model, the permeability (k)
uniform. At f = 0.10 and 0.20, melt wets both grain 0.05, nodes with coordination numbers of 4 are of olivine-basalt systems depends on melt frac-
edges and a large proportion of the grain bound- most abundant, in agreement with theoretical tion (f) and grain size (d):
A B fn d 2
k¼ ð1Þ
C
where C is a geometrical factor (13). For an
isotropic system, n = 2 and C ~ 1600 to 3000
have been derived numerically (13, 23). Empir-
ical relationships with values of n ≈ 3 and C ≈ 10
to 270 were inferred from experimental data
(19, 24 ). The heterogeneous melt distribution
observed in this study implies that n = 3 pro-
vides a better permeability estimate (22, 24). For
d = 3 mm and f = 0.02, k ~ 10−12 m2 (13, 22).
Melt ascent velocity (v) beneath a mid-ocean
ridge is given by
k Dr g
v ¼ ð2Þ
C D fh
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30. M. Jull, P. B. Kelemen, K. W. W. Sims, Geochim. under the Major National Research Facilities Program. Use of Supporting Online Material
Cosmochim. Acta 66, 4133 (2002). the Advanced Photon Source was supported by the U.S. www.sciencemag.org/cgi/content/full/332/6025/88/DC1
31. M. Spiegelman, D. McKenzie, Earth Planet. Sci. Lett. 83, Department of Energy, Office of Science, Office of Basic Materials and Methods
137 (1987). Energy Sciences, under contract DE-AC02-06CH11357. Figs. S1 to S3
32. This work is supported by NSF-EAR 0753505 (W.Z. and We thank X. Xiao and J. Liu for their assistance. We References
G.A.G.) and NSF-OCE 0937277 (L.G.J.M.). F.F. was supported furthermore acknowledge the Centre for Microscopy, Movie S1
by the Western Australian State Government through the Characterisation and Analysis for use of an electron
Premier’s Fellowship Program and the Australian Synchrotron microprobe and iVEC for use of their data storage and 27 December 2010; accepted 16 February 2011
Research Program, funded by the Commonwealth of Australia visualization facilities. 10.1126/science.1202221
Selective Inhibition of a Regulatory Min6 and rat INS-1 pancreatic beta cells (Fig. 1,
A and B). Guanabenz also promoted the surviv-
al of HeLa cells exposed to cytotoxic ER stress
Subunit of Protein Phosphatase 1 induced by tunicamycin in a dose-dependent man-
ner (Fig. 1C), with a median effective concentra-
Restores Proteostasis tion of ~0.4 mM (Fig. 1D). Unlike guanabenz, the
a2-adrenergic receptor agonist clonidine and the
receptor antagonist efaroxan were without effect
Pavel Tsaytler,1 Heather P. Harding,2 David Ron,2 Anne Bertolotti1* on the survival of tunicamycin-stressed cells (fig.
Many biological processes are regulated through the selective dephosphorylation of proteins. Protein S1). Thus, guanabenz rescued cells from lethal
serine-threonine phosphatases are assembled from catalytic subunits bound to diverse regulatory ER stress by a mechanism independent of the
subunits that provide substrate specificity and subcellular localization. We describe a small molecule, a2-adrenergic receptor.
guanabenz, that bound to a regulatory subunit of protein phosphatase 1, PPP1R15A/GADD34, We next measured the effect of guanabenz
selectively disrupting the stress-induced dephosphorylation of the a subunit of translation initiation on the different branches of the UPR. Unlike
factor 2 (eIF2a). Without affecting the related PPP1R15B-phosphatase complex and constitutive tunicamycin, 50 mM guanabenz did not increase
protein synthesis, guanabenz prolonged eIF2a phosphorylation in human stressed cells, adjusting the the levels of the UPR targets GRP94, BiP, ATF4,
protein production rates to levels manageable by available chaperones. This favored protein folding and CHOP (Fig. 2A), nor did it decrease pro-
and thereby rescued cells from protein misfolding stress. Thus, regulatory subunits of phosphatases tein synthesis (Fig. 2B). Thus, guanabenz on its
are drug targets, a property used here to restore proteostasis in stressed cells. own did not induce the UPR or inhibit the trans-
lation machinery. Next, we examined the effect
he unfolded protein response (UPR) (1–3) proteins. Indeed, guanabenz protected against of guanabenz in stressed cells. Attenuation of
30
folding, such as those encoding the chaperones 20
80 80 10
BiP and GRP94. Activated PERK attenuates glob- 0
al protein synthesis by phosphorylating the a sub- 60 60 Guanabenz 0 0.2 1 2.5 5 μM
unit of translation initiation factor 2 (eIF2a) on 24 h Tm
Ser51 while promoting translation of the tran- 40
Guanabenz 0 0.2 0.5 μM
40
Guanabenz 0 0.5 1 2.5 μM **
**
35
Cell viability (%)
50
to dephosphorylate eIF2a, allowing protein syn-
thesis to resume (5). UPR failure contributes to 40 Fig. 1. Guanabenz protects cells from del-
many pathological conditions (6) that might be cor- 30
eterious accumulation of misfolded proteins
in the endoplasmic reticulum. (A) Assess-
rected by adequate boost of this adaptive response. 20
ment of the number of viable, blasticidin-
Guanabenz, an a2-adrenergic receptor agonist 10 resistant Min6 cells, after transduction with
used in the treatment of hypertension (7), shows blasticidin resistance (blst)–tagged lentivi-
0
anti-prion activity (8). We decided to assess wheth- Guanabenz 0 0.01 0.025 0.05 0.1 0.25 0.5 1 1.75 2.5 3 4 5 μM ruses encoding a misfolding-prone fusion of
er guanabenz had broader activity in protecting insulinAkita with green fluorescent protein
against detrimental accumulation of misfolded (GFP) (10), treated with the indicated concentrations of guanabenz. Values, corresponding to the cells’ ability to
reduce WST-8 into formazan, were normalized to those of cells transduced with blst-tagged lentiviruses encoding
1
MRC Laboratory of Molecular Biology, Hills Road, Cambridge cytoplasmic GFP. (B) Same as (A) with INS-1 cells. (C) Viability of HeLa cells assessed by the reduction of WST-8
CB2 0QH, UK. 2Institute of Metabolic Sciences, University of [2-(2-methoxy-4-nitrophenyl)-3-(4-nitrophenyl)-5-(2,4-disulfophenyl)-2H-tetrazolium] into formazan, after
Cambridge, Cambridge CB2 0QQ, UK. treatments with tunicamycin (2.5 mg/ml; Tm) for 12 or 24 hours, with or without the indicated concentrations
*To whom correspondence should be addressed. E-mail: of guanabenz. (D) Dose-dependent protection of HeLa cells by guanabenz, from ER stress induced by 6 hours of
aberto@mrc-lmb.cam.ac.uk exposure to tunicamycin. Data are means T SD (n = 4). **P ≤ 0.001; ***P ≤ 0.0001.
A Guanabenz Tm B Guanabenz Tm
Time 0 0.5 1 2.5 5 7.5 10 0 0.5 1 2.5 5 7.5 10 h Time 0 0.5 1 2.5 5 7.5 0 0.5 1 2.5 5 7.5 h
GRP94
BiP
35S-methionine
ATF4
Tubulin
Coomassie
CHOP
C Tm Tm + Guanabenz D Tm Tm + Guanabenz
Time 0 2 5 7.5 10 12.5 0 2 5 7.5 10 12.5 h Time 0 2 5 7.5 10 12.5 0 2 5 7.5 10 12.5 h
kDa GRP94
130
95 BiP
72
Tubulin
55
ATF4 E
43
BIP-containing
34 P-eIF2α HMW complexes
Fig. 2. Guanabenz increases chaperone availability by attenuating translation cells were treated with Tm in the presence or absence of guanabenz. (D) Im-
recovery after ER stress. (A) Immunoblot of the indicated proteins in lysates of munoblots of HeLa cell lysates from cells treated with tunicamycin (2.5 mg/ml)
HeLa cells treated with guanabenz (50 mM) or Tm (2.5 mg/ml; Tm) for the in the presence or absence of guanabenz (50 mM) for the indicated times. (E)
indicated times. (B) Autoradiogram of [35S]methionine-labeled proteins in cell Immunoblots of BiP recovered in SDS-resistant high–molecular weight (HMW)
lysates resolved by NuPage after a 10-min labeling pulse of HeLa cells exposed complexes (12) or in the total cell lysates from HeLa cells left untreated or treated
to guanabenz (50 mM) or Tm (2.5 mg/ml) for the indicated times. Lower panel is with tunicamycin in the presence or absence of guanabenz. Representative results
a photomicrograph of the Coomassie-stained gel. (C) Same as (B) except that of three independent experiments are shown.
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guanabenz had no measurable effect on the via- whether guanabenz could protect cells lacking in ER stressed cells resulted from its inhibition of
bility of wild-type MEFs, or MEFs lacking a func- PPP1R15A activity from lethal ER stress (11). Al- PPP1R15A.
tional allele of Ppp1r15a, at concentrations that though it protected wild-type MEFs from ER Our results show that specific phosphatases
protected against protein misfolding. To further stress, guanabenz had no protective effect in MEFs can be inhibited by targeting their regulatory
validate that guanabenz rescued cells from mis- lacking PPP1R15A activity (Fig. 4B). Thus, all the subunits and that selective inhibition of PPP1R15A
folding stress by targeting PPP1R15A, we assessed measurable cytoprotective activity of guanabenz protects cells from the otherwise lethal accumu-
A B FLAG- FLAG-
IP: PPP1R15A SN PPP1R15A PPP1R15B
lysate + + - + + + + + + + + + Guanabenz - + - +
Tm + + - - + + - + + - + +
Guanabenz - + - - - + - - + - - + kDa
PPP1R15A Ab + + + - - - + + + - - - 130
FLAG-PPP1R15A
PPP1R15A 95 FLAG-PPP1R15B
72
IgG 55
43
PP1c
PP1c
C D PPP1R15A/B
FLAG-PPP1R15A PPP1R15A
PP1c PPP1R15B
- 0 10 50 PPP1R15A/B - + - - + +
Guanabenz (μM) Biotinylated Guanabenz - + - +
E F 1 337 510 555-558 674
beads after human
input bound eluate elution PPP1R15A
4 repeats PP1 binding
motif
PPP1R15A
input bound input bound
230-674
230-674
PP1c
1-674
1-230
1-674
1-230
PPP1R15A - + - + + + + + kDa
130
Guanabenz + + 95
DMSO + + 72 recombinant
PPP1R15A
230-674
Fig. 3. Guanabenz selectively binds PPP1R15A and disrupts the 55
PPP1R15A-PP1c complex. (A) Immunoblots of PPP1R15A immuno- 43
precipitates (IP) recovered from lysates of HeLa cells treated with
tunicamycin for 10 hours, in the presence of guanabenz for the last 34
5 hours where indicated (50 mM). SN, supernatant of the immuno- 35
S-methionine Coomassie
purification. (B) FLAG immunoprecipitates of HeLa cells overexpressing
Biotinylated Guanabenz - + - + - + - +
FLAG-tagged PPP1R15A or PPP1R15B, untreated or treated with 50 mM
guanabenz for 6 hours, analyzed by immunoblotting. (C) FLAG-PPP1R15A that PP1c did not bind to the biotinylated guanabenz. (F) Top: Schematics of
immunoprecipitates from unstressed HeLa cells, washed with indicated con- human PPP1R15A. Lower left: Same as (D) except that proteins were in vitro
centrations of guanabenz and analyzed by immunoblotting. (D) Immunoblots translated in the presence of [35S]methionine and revealed by phosphor-
showing that PPP1R15A but not PPP1R15B, expressed in rabbit reticulocyte imaging. Lower right: Coomassie-stained gel showing bacterially expressed
lysate (input), selectively bound to biotinylated guanabenz immobilized on and purified PPP1R15A230–674 fragment (input) selectively retained on
neutravidin beads. (E) In vitro translated PPP1R15A bound biotinylated neutravidin beads in the presence of biotinylated guanabenz (bound). Rep-
guanabenz immobilized on neutravidin beads eluted with 1 mM guanabenz. resentative results of at least three independent experiments are shown in
Immunoblots show inputs, eluates, and beads before and after elution. Note each panel.
Directional Switching of the Kinesin total internal reflection fluorescence (TIRF) micros-
copy, we examined the behavior of single Cin8
tetramers on individual immobilized micro-
Cin8 Through Motor Coupling tubules in vitro (Fig. 1, B and C, fig. S2, and movie
S1). Cin8 motility displayed a combination of
Johanna Roostalu,1 Christian Hentrich,2* Peter Bieling,2† Ivo A. Telley,2 directional and diffusive modes as revealed by
Elmar Schiebel,1‡ Thomas Surrey2‡§ means of kymographs (time-space plots) (Fig. 1D)
and confirmed through mean square displace-
Kinesin motor proteins are thought to move exclusively in either one or the other direction along microtubules. ment (MSD) analysis (Fig. 1E) (14). The one-
Proteins of the kinesin-5 family are tetrameric microtubule cross-linking motors important for cell division dimensional diffusion coefficient was 0.03 mm2/s,
and differentiation in various organisms. Kinesin-5 motors are considered to be plus-end–directed. However, and the directional drift speed was 101.7 nm/s.
here we found that purified kinesin-5 Cin8 from budding yeast could behave as a bidirectional kinesin. On This composite motility is similar to the single-
individual microtubules, single Cin8 motors were minus-end–directed motors, whereas they switched to motor behavior of vertebrate kinesin-5 (15). How-
plus-end–directed motility when working in a team of motors sliding antiparallel microtubules apart. This ever, in contrast to other kinesin-5 family members
kinesin can thus change directionality of movement depending on whether it acts alone or in an ensemble. and all other natural N-terminal kinesins, single
1
inesins are microtubule-binding motor rified vertebrate kinesin-5 is plus-end–directed
K
Zentrum für Molekulare Biologie der Universität Heidelberg,
proteins required for essential intracel- and slides antiparallel microtubules apart in vitro DKFZ-ZMBH Allianz, Im Neuenheimer Feld 282, Heidelberg
69120, Germany. 2Cell Biology and Biophysics Unit, European
lular movements (1). They are known to (7), which is consistent with its role in the mitotic Molecular Biology Laboratory, Meyerhofstrasse 1, 69117 Heidel-
be unidirectional, and their directionality depends spindle. Budding yeast possesses two largely re- berg, Germany.
on how the motor domain is linked to the re- dundant kinesin-5 proteins, with Cin8 being the *Present address: Howard Hughes Medical Institute, Depart-
mainder of the molecule (2, 3). Kinesins with an more prominent one (8, 9). Apart from its role ment of Molecular Biology and Center for Computational and
N-terminal motor domain move toward the plus in spindle assembly (8, 9), Cin8 is required for Integrative Biology, Massachusetts General Hospital, Boston,
end of microtubules, whereas C-terminal kinesins kinetochore positioning in metaphase (10, 11) MA 02114, USA.
†Present address: Department of Cellular and Molecular Phar-
are minus-end–directed (4). The directionality of and for spindle elongation during anaphase, when macology, University of California, San Francisco, San Fran-
intracellular transport processes is thought to be it localizes to overlapping antiparallel micro- cisco, CA 94158, USA.
regulated by selective recruitment or activation of tubules in the spindle midzone (11–13). ‡To whom correspondence should be addressed. E-mail:
different sets of motors with characteristic, built-in We purified recombinant full-length Cin8 e.schiebel@zmbh.uni-heidelberg.de (E.S.); thomas.surrey@
cancer.org.uk (T.S.)
directionalities (1). fused to monomeric green fluorescent protein §Present address: Cancer Research UK London Research In-
Kinesin-5 is an N-terminal homotetrameric (mGFP) (Fig. 1A) (14). Cin8-mGFP was a tetra- stitute, Lincoln’s Inn Fields Laboratories, 44 Lincoln’s Inn Fields,
kinesin that cross-links microtubules (5, 6). Pu- mer (table S1 and fig. S1), as expected (5). Using London WC2A 3LY, UK.
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Cin8 motors clearly moved on average toward end–directed motility of single Cin8 tetramers In vivo Cin8 extends the yeast anaphase
microtubule minus ends (Fig. 1, C and D, and fig. was an inherent feature of adenosine 5´-triphosphate spindle through plus-end–directed antiparallel
S2). Mean displacement (MD) analysis (Fig. 1F) (ATP)–dependent motor activity because in the microtubule sliding (13, 16). To test whether
revealed that individual Cin8 motors were minus- presence of ADP, Cin8 displayed only diffusive Cin8 might switch directionality of movement
end–directed, with an average speed of 58 nm/s motion without any directional bias (fig. S3) with when cross-linking two microtubules, we gen-
(Fig. 1F). This difference in speed obtained from reduced dwell times (Fig. 1G). Thus, Cin8 repre- erated antiparallel microtubule pairs of differently
either MSD or MD analysis was due to the broad sents an N-terminal kinesin that moves toward fluorescently labeled and polarity-marked micro-
displacement distribution (fig. S2D) (14). Minus- the microtubule minus end. tubules (17). One of the microtubules in a pair
A kDa B
Single molecule imaging
250
_
+
95
72
_ + _ + _
D +
55
C
0s _ +
2s
4s
6s
10 s
8s
5 μm 10 μm
E 0.8 F G 10 0
0.00
0.7
v = 101.7 ± 1.0 nm/s -0.05 v = - 58.2 ± 0.1 nm/s τ1 = 1.51 ± 0.01 s
0.6 (72.3 ± 0.3%)
-0.10
D = 0.03 ± 0.001 μm2/s
MSD (μm2)
0.5 10-1
1 - CDF
MD (μm)
-0.15
0.4
-0.20
0.3
-0.25
0.2 10-2
-0.30 τ2 = 9.05 ± 0.07 s
0.1
(27.7 ± 0.3%)
0.0 -0.35
0 1 2 3 4 5 6 0 1 2 3 4 5 6 0 10 20 30 40 50
Time (s) Time (s) Dwell time (s)
Fig. 1. Single Cin8 motors on individual microtubules are minus-end– individual Cin8-mGFP binding events on polarity-marked microtubules. Mean
directed. (A) Coomassie-stained SDS–polyacrylamide gel electrophoresis (SDS- velocities (v) and the diffusion constant (D) were derived by fitting the following
PAGE) of purified recombinant Cin8-mGFP. (B) Scheme of the single-molecule functions to (E) MSD and (F) MD data: (dashed red line) MSD = v 2t2 + 2Dt +
assay. (C) Example frames of a TIRF microscopy time-lapse movie showing (green; offset and (dashed blue line) MD = vt. (G) Mean dwell times (t) and relative
white arrowheads) Cin8-mGFP movement on (red) a surface-immobilized Alexa568- amplitudes (in brackets) were obtained from fitting a bi-exponential function
labeled polarity-marked microtubule with a bright plus end and a dim minus (dashed green line) to the measured dwell time distribution [shown as 1 –
end. (D) Representative kymographs of (green) Cin8-mGFP movement on (red) cumulative distribution function (CDF)]. Cin8-mGFP was used at 20 to 30 pM.
Alexa568-labeled polarity-marked microtubules. (E to G) Quantification of 5000 Stated errors and error bars represent SEM.
Time
assay. (B) TIRF microsco-
py images showing (red) _ motile
+ Space
polarity-marked Alexa568- microtubule
microtubules cross-linked to
(blue) surface-immobilized B
polarity marked Alexa647- +
_
attached
microtubules by (green) _ _ microtubule
_ +
4.5 nM of Cin8-mGFP in + +
+
an antiparallel orientation. _
White arrowheads indi- + _ motile
cate Cin8-mGFP accumu- microtubule
lation at the minus ends
of surface-immobilized
attached
microtubules. (C) Example microtubules Cin8-mGFP
kymographs of a sliding
antiparallel microtubule
pair. (D) Quantification of
antiparallel microtubule overlay
sliding. MSD and MD motile
90 s
3.0
MD (μm)
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the crucial parameter determining directionality of Minus-end–directed movement of Cin8 has previously (10) was rarely observed (<1%). The
transport is not the ionic strength itself but rather not been observed in vivo. Because individual localization of cytoplasmic Cin8 was strongly
is the number of mechanically coupled motors on spindle microtubules cannot be visualized easily microtubule-dependent (Fig. 4, A and B),
the glass surface that interact with a microtubule. inside the yeast nucleus, we targeted GFP-labeled making the possibility of a direct interaction of
Increased salt concentrations weaken the motor- Cin8 to the cytoplasm by deleting the C-terminal Cin8 with SPB components unlikely. Time-lapse
microtubule interaction and hence lower the num- nuclear localization signal (NLS) (10, 20). This en- imaging revealed short-lived microtubule bind-
ber of microtubule-bound motors at a given surface abled us to observe Cin8 along single cytoplasmic ing events of Cin8 (Fig. 4C), which is in agree-
density (19), supporting this interpretation. Direc- microtubules. In all cells, Cin8 accumulated near ment with its in vitro dwell time and in contrast to
tional switching did not require the entire tetra- the minus ends of cytoplasmic microtubules that the very processive plus-end–directed motility of
meric Cin8 protein, as demonstrated by using a are organized by the spindle pole body (SPB) Kip3 in vivo (Fig. 4D) (21, 22). Thus, it is likely
C-terminally truncated Cin8 construct previously (Spc72-mCherry) (Fig. 4, A and B, and fig. S9). that Cin8 acts as a minus-end–directed motor on
shown to be dimeric (fig. S8 and table S1) (5). Microtubule plus-end binding of Cin8 as reported individual microtubules in vivo.
4.9 ± 0.001
Fig. 3. Cin8 changes di- A E 5 2.5 ± 0.004
rectionality depending on 0 - 0.9 ± 0.007 3.9 ± 0.002
150 s
SEM. Dotted black lines
on (B) to (D) are 95% con-
5 μm
fidence intervals. 0.10 0.8
10 0.7
0.08
0.6
0.06 0.5
8 0.4
0.04
MSD (μm2)
0.25
0.00
-0.25
-0.50 v = 4.4 ± 0.001 nm/s v = - 3.8 ± 0.01 nm/s
MD (μm)
A + B
cytoplasmic _
microtubules
_
Cin8ΔNLS- mCherry- Cin8ΔNLS- Spc72- overlay
3xGFP Tub1 overlay 3xGFP mCherry
+
metaphase
spindle cytoplasmic side
of spindle pole body
Control
Control
Nocodazole
Nocodazole
5 μm 5 μm
_ 2 μm _ 2 μm _ 2 μm
+ + +
10 s
10 s
10 s
2 μm 2 μm 2 μm
Fig. 4. Cin8 accumulates toward microtubule minus ends in vivo. Localization ends. Dimethyl sulfoxide–treated control cells were compared with cells
of cytoplasmic Cin8 (Cin8DNLS-3GFP) in cells with (A) labeled cytoplasmic treated with the microtubule-depolymerizing drug nocodazole. Time-lapse
microtubules (mCherry-Tub1) or (B) labeled cytoplasmic SPB component analysis of (C) Cin8DNLS-3GFP and (D) Kip3-3GFP on cytoplasmic micro-
Spc72 (Spc72-mCherry; red) that anchors cytoplasmic microtubule minus tubules (mCherry-Tub1).
Similar to Cin8, kinesin-5 motors from fission microtubules, single Cin8 motors preferentially 12. A. Khmelinskii, J. Roostalu, H. Roque, C. Antony,
yeast (23), Xenopus (24), and Drosophila (25) move toward the minus end, whereas they switch E. Schiebel, Dev. Cell 17, 244 (2009).
13. W. S. Saunders, D. Koshland, D. Eshel, I. R. Gibbons,
concentrate near spindle poles. Accumulation of to plus-end–directed movement when part of a M. A. Hoyt, J. Cell Biol. 128, 617 (1995).
plus-end–directed Xenopus kinesin-5 at the poles large team of mechanically coupled motors cross- 14. Materials and methods are available as supporting
depends on the minus-end–directed motor dynein linking antiparallel microtubules. Such a context- material on Science Online.
(26), which does not have a nuclear function in dependent change in directionality is different 15. B. H. Kwok et al., Nat. Chem. Biol. 2, 480 (2006).
16. A. F. Straight, J. W. Sedat, A. W. Murray, J. Cell Biol. 143,
yeast. The minus-end–directed motility of Cin8 from previously studied cases of bidirectionality 687 (1998).
might bypass one of the functions that dynein has (14, 31). 17. C. Hentrich, T. Surrey, J. Cell Biol. 189, 465 (2010).
in higher eukaryotes. 18. L. Gheber, S. C. Kuo, M. A. Hoyt, J. Biol. Chem. 274,
Microtubule cross-linking promotes direction- References and Notes 9564 (1999).
1. N. Hirokawa, Y. Noda, Y. Tanaka, S. Niwa, Nat. Rev. Mol. 19. P. Bieling, I. A. Telley, J. Piehler, T. Surrey, EMBO Rep. 9,
al over diffusive motility of plus-end–directed 1121 (2008).
Cell Biol. 10, 682 (2009).
Xenopus kinesin-5 (27). Here, Cin8 motors switched 2. S. A. Endow, K. W. Waligora, Science 281, 1200 (1998). 20. E. R. Hildebrandt, M. A. Hoyt, Mol. Biol. Cell 12, 3402
directionality in response to team size, suggesting 3. U. Henningsen, M. Schliwa, Nature 389, 93 (1997). (2001).
that the ability to sense and respond to mechan- 4. H. Miki, Y. Okada, N. Hirokawa, Trends Cell Biol. 15, 467 (2005). 21. M. L. Gupta Jr., P. Carvalho, D. M. Roof, D. Pellman,
ical constraints might be a property of kinesin-5 5. E. R. Hildebrandt, L. Gheber, T. Kingsbury, M. A. Hoyt, Nat. Cell Biol. 8, 913 (2006).
J. Biol. Chem. 281, 26004 (2006). 22. V. Varga, C. Leduc, V. Bormuth, S. Diez, J. Howard, Cell
motors, possibly because of specific features of 6. A. S. Kashina et al., Nature 379, 270 (1996). 138, 1174 (2009).
this kinesin family (28, 29). However, Cin8 is 7. L. C. Kapitein et al., Nature 435, 114 (2005). 23. I. Hagan, M. Yanagida, Nature 356, 74 (1992).
also an unusual member of the kinesin-5 family 8. M. A. Hoyt, L. He, K. K. Loo, W. S. Saunders, J. Cell Biol. 24. K. E. Sawin, K. LeGuellec, M. Philippe, T. J. Mitchison,
in containing a multitude of insertions and muta- 118, 109 (1992). Nature 359, 540 (1992).
9. D. M. Roof, P. B. Meluh, M. D. Rose, J. Cell Biol. 118, 25. D. K. Cheerambathur, I. Brust-Mascher, G. Civelekoglu-Scholey,
tions in usually conserved regions (29, 30). 95 (1992). J. M. Scholey, J. Cell Biol. 182, 429 (2008).
In conclusion, Cin8 can switch between two 10. M. K. Gardner et al., Cell 135, 894 (2008). 26. T. M. Kapoor, T. J. Mitchison, J. Cell Biol. 154, 1125 (2001).
distinct states of directional motility. On individual 11. J. D. Tytell, P. K. Sorger, J. Cell Biol. 172, 861 (2006). 27. L. C. Kapitein et al., J. Cell Biol. 182, 421 (2008).
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28. A. G. Larson, N. Naber, R. Cooke, E. Pate, S. E. Rice, manuscript; and the Deutsche Forschungsgemeinschaft, Supporting Text
Biophys. J. 98, 2619 (2010). the European Commission (Marie Curie Research Training Figs. S1 to S9
29. J. Turner et al., J. Biol. Chem. 276, 25496 (2001). Network “Spindle Dynamics”), and the Swiss National Tables S1 to S2
30. A. J. Bodey, M. Kikkawa, C. A. Moores, J. Mol. Biol. 388, Science Foundation for financial support. References
218 (2009). Movies S1 to S3
31. T. Guérin, J. Prost, P. Martin, J. F. Joanny, Curr. Opin.
Cell Biol. 22, 14 (2010). Supporting Online Material 3 November 2010; accepted 11 February 2011
32. We thank D. Pellman and M. Knop for plasmids; I. Hagan, www.sciencemag.org/cgi/content/full/science.1199945/DC1 Published online 24 February 2011;
J. Ellenberg, and M. Kaksonen for critically reading the Materials and Methods 10.1126/science.1199945
The C-Terminal Domain of RNA The largest subunit of RNAPII contains two
arginine residues within the CTD; one is present
within the N-terminal half of the CTD (R1603,
Polymerase II Is Modified by second repeat), and the other within the C-terminal
half (R1810, repeat number 31) (8). We tested
Site-Specific Methylation whether both arginines are targets of CARM1
using methylation assays with GST fusion proteins
containing either the N-terminal (GST-N-CTD)
Robert J. Sims III,1*† Luis Alejandro Rojas,1* David Beck,1 Roberto Bonasio,1 Roland Schüller,2 or C-terminal (GST-C-CTD) portions of the CTD.
William J. Drury III,1 Dirk Eick,2 Danny Reinberg1‡ Only the GST-C-CTD substrate was methylated
by recombinant CARM1, indicating that CARM1
The carboxy-terminal domain (CTD) of RNA polymerase II (RNAPII) in mammals undergoes targets R1810 (Fig. 2A). An alignment of the
extensive posttranslational modification, which is essential for transcriptional initiation and residues surrounding R1810 from different species
elongation. Here, we show that the CTD of RNAPII is methylated at a single arginine (R1810) by the suggests that CARM1 methylation may be con-
coactivator-associated arginine methyltransferase 1 (CARM1). Although methylation at R1810 is served throughout evolution (Fig. 2B).
present on the hyperphosphorylated form of RNAPII in vivo, Ser2 or Ser5 phosphorylation inhibits CARM1 methylated highly purified RNAP II
CARM1 activity toward this site in vitro, suggesting that methylation occurs before transcription derived from HeLa-S3 cells (Fig. 2C): Only the
initiation. Mutation of R1810 results in the misexpression of a variety of small nuclear RNAs hypophosphorylated (IIA) form of RNAPII was
and small nucleolar RNAs, an effect that is also observed in Carm1−/− mouse embryo fibroblasts. methylated; the hyperphosphorylated form of
These results demonstrate that CTD methylation facilitates the expression of select RNAs, perhaps RNAPII (IIO) was not. Methylation experiments
serving to discriminate the RNAPII-associated machinery recruited to distinct gene types. by use of the CTD fusion protein that was pre-
phosphorylated by Ser5- (CAK) or Ser2-specific
he carboxy-terminal domain (CTD) of ferase enzyme from this extract (Fig. 1, B and C), (P-TEFb) kinases suggest that CARM1 methyl-
No CTD
No CTD
E Superose 6
ation assay with the same extracts. WT Carm1 -/-
500 kDa
Hydroxyapatite
0.8M
MT Activity 3
H-Fluorography
0.05M
CTDme activity
Kinase Activity 32
P-Fluorography
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methylates the CTD of RNAPII in vivo and does transcriptome analysis results suggest that steady- small RNAs, such as 5S and U6, was not affected
so before the CTD is phosphorylated. Yet given state levels of small nuclear RNAs (snRNAs) as (Fig. 4B, bottom plots). The misregulation of
that the methylated CTD is a substrate for sub- well as small nucleolar RNAs (snoRNAs) are snRNA expression was also detected in Carm1−/−
sequent phosphorylation and that phosphorylated affected in a general manner (Fig. 4B and fig. S3). MEFs through quantitative RT-PCR (Fig. 4D),
RNAPII exhibits this methylation state (Fig. 3D), We confirmed these results for a number of can- suggesting that the functions of CARM1 and
it is highly probable that R1810me is preserved didate transcripts through quantitative reverse tran- R1810me are related and that they are conserved,
on the transcribing polymerase, not having a major scription polymerase chain reaction (RT-PCR) at least in mammals.
impact on CTD phosphorylation. using total RNA derived from WT or R1810A cells The observed de-repression of snRNAs and
To address the function of RNAPII methyla- (Fig. 4C). Because a large number of snRNAs and snoRNAs in the absence of R1810me suggests
tion, we generated cell lines expressing an RNAPII snoRNAs were affected, we asked whether there that this CTD modification functions in opposi-
resistant to a-amanitin and carrying either wild- was a general correlation between the size of the tion to the activating effect of Ser phosphoryla-
type (WT) R1810 or an arginine-to-alanine substi- RNA species whose expression was affected as tion (12–14). In addition to the direct function of
tution at that same residue, abolishing R1810 a consequence of the absence of R1810me (fig. CARM1 in splicing, in which it modulates the
methylation of the CTD (Fig. 4A). In cells cultured S4). The effect appeared specific to snRNAs and recognition of 5′ splice sites through its interaction
in a-amanitin, the a-amanitin–resistant mutants ful- snoRNAs, however, because transcripts of com- with U1 small nuclear ribonucleoprotein complex
ly replaced the functions of endogenous RNAPII, parable size with that of snRNAs and snoRNAs but (15), CARM1 may also contribute to splicing indi-
allowing us to study whether gene expression is belonging to different classes of RNAwere not up- rectly through modulating the levels of spliceosome
affected by the absence of R1810me (11). Our regulated. Also, expression of RNAPIII-transcribed components, such as U1 and U2 (Fig. 4).
CTDme0
CTDme2a
IIO + PPase
IIO + PPase
D
RNAP IIO
RNAP IIO
H4R3me2s H3R26me2a
IIO
250kDa
IIA
anti-CTDme2 anti-CTD
A RPB1-αAmr-WT
6-10 days 10 days RNA extraction,
Transfection rRNA depletion, Illumina
Selection on Selection on
library preparation sequencing
Neomycin α−Amanitin
RPB1-αAmr-R1810A
C 3000 U1 RNA 6 U2 RNA 0.08 SNORA55 0.10 SNORA74
processed_transcr 0.02
0.02
protein_coding
U1 pseudogene 0 0 0.00 0.00
4
t
A
A
t
A
SNORA55 scRNA_pseudogene
iw
iw
iw
iw
10
10
10
10
aj
aj
aj
aj
18
18
18
18
R
R
R
snoRNA
iR
iR
iR
iR
aj
aj
aj
aj
snRNA
R
R
20 0.06 0.8 1.5
U6 RNA TERC RNA CARM1 mRNA 5S RNA
10 0.4
0.02 0.5
5 0.2
t
t
A
A
t
t
A
iw
iw
iw
iw
10
10
10
10
aj
aj
aj
aj
18
18
18
18
R
R
iR
iR
iR
iR
CARM1
aj
aj
aj
aj
WT
R
R
R
D 400
−2 U1 RNA U2 RNA 200
5S RNA 250
Atp5b mRNA
20000 150
200 100
100
10000 100 50
−5 0 5 10 15 50
0 0 0 0
A
t
t
/-
/-
t
/-
/-
w
w
w
1-
1-
1-
1-
EF
EF
EF
EF
m
m
m
ar
ar
ar
M
ar
M
M
C
C
C
EF
EF
EF
EF
M
M
M
Fig. 4. R1810A mutation affects snRNA and snoRNA expression. (A) Sche- Raji cells carrying WT or R1810A a-amanitin–resistant RNAPII. Top four
matic of the generation of Raji cells containing R1810A mutation and RNA-seq plots show affected snRNAs and snoRNAs. Bottom four plots show expression
library preparation. (B) MA plot of genome-wide expression changes as deter- levels of RNAs that were unaffected. Bars represent mean + SEM from two
mined with RNA-seq. Log2 fold-changes (M) in normalized number of reads are (WT) or three (R1810A) biological replicates and two independent cDNA prep-
plotted on the y axis, and average intensities (A) are plotted on the x axis. Each arations. (D) Quantitative RT-PCR analysis of WT and Carm1−/− MEF cells. Bars
dot represents a gene from ENSEMBL59. Colors indicate gene biotypes; only the represent mean + SEM from two independent RNA preparations from MEFs at
eight most numerous are depicted here. (C) Quantitative RT-PCR validation on different passages.
R1810me2s
R1810me1
10% Input
cifically associate with methylated arginine resi- S5), suggesting that TDRD3 may be involved in a
dues (16–18). Tudor domain–containing proteins different function of CTD methylation, unrelated
SMN, SPF30, and TDRD3 bind preferentially to to snRNA and snoRNA regulation.
both symmetric and asymmetric dimethyl arginine We have shown here that the CTD of RNAPII
in the context of Gly-Arg patches (GR motifs). is methylated at R1810 by CARM1 in vitro and in
TDRD3-GST TDRD3 displayed a specific interaction with the vivo. This modification plays a role in the regu-
R1810me2a-containing CTD peptide, as opposed lation of snRNA and snoRNA expression. In ad-
to the unmodified CTD or mono- or symmetric- dition, the tudor domain of TDRD3 specifically
SMN-GST
dimethylated R1810 (Fig. 5). In contrast, SMN recognizes CTD-R1810me2a. Although TDRD3
and SPF30 did not exhibit affinity for either the does not play a role in the regulation of snoRNA
SPF30-GST unmodified CTD or any methylated version there- expression, it could very well participate in dif-
of. TDRD3 can be recruited to chromatin in a ferent downstream functions of CTD-R1810me2a.
CARM1-dependent manner, although it is not
TDRD3-GST clear whether histones or other substrates of
Y573A CARM1 are recognized by this Tudor domain–
References and Notes
containing protein (19). On the basis of the crystal 1. S. Egloff, S. Murphy, Trends Genet. 24, 280
TDRD3-GST structure of the TDRD3 tudor domain (Protein (2008).
Y566A W567A
Data Bank ID 2D9T), we mutated residues typi- 2. N. Fong, D. L. Bentley, Genes Dev. 15, 1783
Silver stain cally responsible for binding to methylated arginines (2001).
3. T. Misteli, D. L. Spector, Mol. Cell 3, 697 (1999).
Fig. 5. The methylated CTD is recognized selectively (Fig. 5, bottom). The relevant TDRD3 mutants did 4. K. Ryan, K. G. K. Murthy, S. Kaneko, J. L. Manley,
by TDRD3. Shown are silver staining of fractions eluted not bind R1810me2a, demonstrating that TDRD3 Mol. Cell. Biol. 22, 1684 (2002).
from the immobilized biotinylated peptides containing interaction with dimethyl-R1810 probably depends 5. Materials and methods are available as supporting
on an aromatic cage structure within its tudor do- material on Science Online.
different modifications at R1810, as indicated on 6. D. Cheng, J. Côté, S. Shaaban, M. T. Bedford, Mol. Cell
top. TDRD3 tudor domain selectively recognized main. However, knockdown of TDRD3 did not 25, 71 (2007).
the R1810me2a peptide. Mutations at the indi- result in the same genome-wide alterations of 7. N. Ohkura, M. Takahashi, H. Yaguchi, Y. Nagamura,
cated TDRD3 aromatic residues abolished binding. snRNA and snoRNA expression as in the case of T. Tsukada, Biol. Chem. 280, 28927 (2005).
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102 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
REPORTS
8. Single-letter abbreviations for the amino acid residues 15. N. Ohkura, M. Takahashi, H. Yaguchi, Y. Nagamura, careful reading of the manuscript; R. D. Chapman and
are as follows: A, Ala; C, Cys; D, Asp; E, Glu; F, Phe; G, T. Tsukada, J. Biol. Chem. 280, 28927 (2005). K. Burger for technical support; and members of the
Gly; H, His; I, Ile; K, Lys; L, Leu; M, Met; N, Asn; P, Pro; Q, 16. J. Côté, S. Richard, J. Biol. Chem. 280, 28476 Reinberg lab for critical commentaries during the
Gln; R, Arg; S, Ser; T, Thr; V, Val; W, Trp; and Y, Tyr. (2005). development of this project. RNA-seq data have been
In the mutants, other amino acids were substituted at 17. N. Shaw et al., Nat. Struct. Mol. Biol. 14, 779 deposited in the National Center for Biotechnology
certain locations; for example, H134R indicates that (2007). Information’s Gene Expression Omnibus as GEO series
histidine at position 134 was replaced by arginine. 18. R. Sprangers, M. R. Groves, I. Sinning, M. Sattler, GSE27315.
9. W. An, J. Kim, R. G. Roeder, Cell 117, 735 (2004). J. Mol. Biol. 327, 507 (2003).
10. R. Métivier et al., Cell 115, 751 (2003). 19. Y. Z. Yang et al., Mol. Cell 40, 1016 (2010). Supporting Online Material
20. These studies were supported by the HHMI (to D.R.) and www.sciencemag.org/cgi/content/full/332/6025/99/DC1
11. M. Meininghaus, R. D. Chapman, M. Horndasch, D. Eick,
J. Biol. Chem. 275, 24375 (2000). grants from NIH (GM-37120 to D.R. and GM-71166 to Materials and Methods
R.J.S.). R.B. is a fellow of the Helen Hay Whitney foundation. Figs. S1 to S5
12. D. Baillat et al., Cell 123, 265 (2005).
13. S. Egloff et al., J. Biol. Chem. 285, 20564 D.E. was supported by Deutsche Forschungsgemeinschaft References
(2010). (SFB/Transregio-5, SFB684) and José Carreras Leukämie- 10 January 2011; accepted 22 February 2011
14. S. Egloff et al., Science 318, 1777 (2007). Stiftung eV. We thank L. Vales, E. Lecona, and P. Voigt for 10.1126/science.1202663
A B
Pro35S :YFP-COP1
- YFP-COP1 - Ig
specifically sensing UV-B radiation has yet been - IIg - UVR8
molecularly identified. - UVR8
We previously provided evidence for a spe- - UVR8
ut
input
- UVR8
inpu
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104 1 APRIL 2011 VOL 332 SCIENCE www.sciencemag.org
REPORTS
protein extracts on ice (Fig. 2C). Moreover, UVR8 irradiated with supplemental UV-B (Fig. 3A). sulted in a constitutive UVR8 dimer with no
monomerization was fluence rate–dependent UVR8 mutants that are nonfunctional and in- response to UV-B (Fig. 3D and fig. S4). Yeast
and displayed a reciprocal relationship between capable of interacting with COP1 were also un- two-hybrid analysis revealed a constitutive in-
treatment duration and fluence rate under the able to form dimers (Fig. 3A). Similar to yeast, teraction of UVR8W285A with COP1, although
tested conditions (fig. S2). Finally, the decrease UVR8 dimers from transfected human embryon- not as strong as the UV-B–induced interaction of
of UVR8 dimers upon UV-B irradiation was also ic kidney (HEK) 293T cells monomerized in the wild-type proteins, and absolutely no inter-
apparent when proteins were cross-linked using response to UV-B (Fig. 3B). action of UVR8W285F with COP1 (Fig. 3E). The
dithiobis(succinimidyl propionate) (DSP) (Fig. 2D, Aromatic amino acids absorb UV-B radia- latter was of particular interest, because dimer
upper panel), which generates reversible protein- tion. Tryptophan, with an absorption maximum formation indicated that the overall structure
protein cross-links that can be cleaved by b- in solution at around 280 nm (which extends was largely unaffected by the moderate single
mercaptoethanol (b-ME) (Fig. 2D, lower panel). to 300 nm and is likely to be further shifted in a tryptophan-to-phenylalanine exchange, whereas
To investigate whether COP1 affects UVR8 protein environment), is particularly suited as UV-B perception was abrogated (absorption max-
monomerization, we used DSP cross-linking on a potential UV-B chromophore (20, 21) (UV-B: imum of phenylalanine at 257 nm).
protein extracts from cop1-4 seedlings treated or 280 to 315 nm). This is in agreement with a Taken together, the results presented here
not treated with UV-B. UVR8 monomerization recent action spectrum for HY5 gene activa- provide strong evidence that plant perception of
was similar in cop1-4 and the wild type, dem- tion by UVR8 that identified peaks at 280 and UV-B is mediated by UVR8 as a UV-B–specific
onstrating that UVR8 monomerization does 300 nm (22). Structure modeling according to photoreceptor, and they support a tryptophan-based
not require functional COP1 protein (Fig. 2D). the structurally related human RCC1 protein perception mechanism, with tryptophan-285 as a
Together, these results demonstrate rapid mono- (12, 23) identified 14 tryptophans of UVR8 (the key residue. The UV-B–driven monomerization
merization of UVR8 dimers, probably as the re- similarly sized human RCC1 contains only four), of the UVR8 dimers signals the receptor activa-
sult of the direct perception of UV-B by UVR8 all located at the top of the predicted UVR8 tion, which then is followed by interaction with
and an associated conformational change (as sug- b-propeller structure (fig. S3), with a particular- COP1 to relay the signal. The constitutive ex-
gested by epitope detection only after UV-B ir- ly intriguing cluster at positions 233, 285, and pression of UVR8 throughout the plant (fig. S5)
radiation of UVR8 before or after electrophoresis, 337 in the center of the protein structure (Fig. 3C (4, 13) allows any plant organ to immediately
or after heat denaturation). and fig. S3). To examine the potential involvement respond to UV-B exposure and to mount pro-
To further challenge the conclusion that the of these tryptophans in UV-B sensing, they were tective measures. UVR8 proteins are broadly pre-
UVR8 protein has UV-B photoreceptor proper- targeted by mutagenesis, changing them to ala- sent and well conserved among plants (fig. S6).
ties, we examined whether UVR8 monomer- nine (UVR8W285A and UVR8W337A) or phenylala- This raises the intriguing possibility that, together
ization also happens in heterologous systems. nine (UVR8W233F, UVR8W285F, and UVR8W337F). with the development of an ozone layer in the
Indeed, dimers were detected when UVR8 was Whereas the W285A, W337A, and W233F mu- stratosphere of Earth (24), the evolution of ter-
expressed in yeast cells grown under conditions tations abrogated dimerization and W337F still restrial plants may be coincident with the acqui-
devoid of UV-B radiation. In contrast, only showed UV-B–induced monomerization, mu- sition of the UV-induced responses mediated by
UVR8 monomers were found after yeast was tation of tryptophan-285 to phenylalanine re- the UVR8 UV-B photoreceptor.
A B GST-UVR8 UVR8 C
- + - + UV B
UV-B
pBTM116 UVR8 UVR8G145S UVR8G202R
- + - + - + - + UV-B dimer 285
100 Le A UVR8dimer
- LexA-UVR8 monomer dimer 337
233
75 - LexA-UVR8 monomer
* **
50
CBB
IB: anti-UVR8
a t U 8
Fig. 3. Tryptophan-285 is required for
UV-B–dependent monomerization of UVR8 E 250
in yeast and human cells. (A) LexA-UVR8 D UVR8 UVR8W285A UVR8 W285F - UV-B
protein expressed in yeast monomerized - + - + - + UV-B 200 +UV-B
MU)
−2 −1
in response to UV-B (5 min, 21 mmol m s ).
activity (M
- LexA-UVR8
one S-transferase (GST)–UVR8 and UVR8 50
proteins expressed in HEK293T cell ex- 50 *
tracts monomerized in response to UV-B 0
CBB
(60 min, 1.5 mmol m−2 s−1). Proteins were UVR8 UVR8 W285A UVR8 W285F UVR8 W285A -
electrophoretically separated without pre- COP1 COP1 COP1 - COP1
W285F
vious heat denaturation. (C) Predicted structure of UVR8, including in particular whereas UVR8 was impaired in its interaction with COP1 (16 hours of
the tryptophan cluster with the tryptophan-233, -285, and -337 residues. (D) UV-B, 1.5 mmol m−2 s−1). (A) and (D) Proteins were electrophoretically
Dependence on tryptophan-285 for UV-B–mediated UVR8 monomerization separated without previous heat denaturation. The protein gel blot was probed
in yeast. UVR8W285A did not form dimers, whereas UVR8W285F formed dimers with an antibody to LexA, and the Coomassie brilliant blue (CBB)–stained
but did not monomerize in response to UV-B (5 min, 21 mmol m−2 s−1). (E) membrane is shown as a loading control. In (A), (B), and (D), the asterisks
UVR8W285A interacted constitutively with COP1 in a yeast two-hybrid assay, indicate degradation products.
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REPORTS
phage, which is infectious to SBW25, can only resistance and infectivity of the focal bacteria and not increase P. fluorescens density in the presence
be transmitted by lysis of the bacterial cell, re- phage, as well as densities of the culturable com- of the natural community because this commu-
sulting in the reciprocal evolution of resistant ponent of the total bacterial community, by plat- nity also inevitably contained growing cells of
bacteria and infectious phages in nutrient media ing onto antibiotic-free agar. different species.
(18). Having established that no culturable bac- Phages reduced the mean density of the P. Coevolution between this bacteria and phage
teria in our soil were resistant to the antibiotic fluorescens population in the presence of the nat- in laboratory media typically results in the
gentamicin (or could be infected by the experi- ural community, whereas in the absence of the evolution of increased resistance and infectivity
mental phage), we used an engineered gentamicin- natural community phages actually increased mean ranges through time (arms race dynamics) (13).
resistant strain of P. fluorescens SBW25 (3) to P. fluorescens density (generalized linear mixed Specifically, bacteria are more resistant to past
inoculate the soil microcosms. All recovered bac- model, interaction between presence/absence of than contemporary phages and more resistant to
teria that could grow on gentamicin therefore natural community and phages: F1,28 = 60, P < contemporary than future phages (13, 21); the
descended from the inoculated ancestral popula- 0.0001) (Fig. 1). In cases in which both bacteria same pattern holds for phage infectivity. To de-
tion. Similarly, we established that there were and phages were co-inoculated, the presence of termine whether this coevolutionary dynamic oc-
no phages in the soil that were able to infect the natural community significantly reduced den- curred in soil, we measured the infectivity to
P. fluorescens SBW25; hence, all recovered sities of bacteria (F1,14 = 23.5, P < 0.001) and bacteria isolated from day 24 of ancestral (day 0)
phages that could infect P. fluorescens SBW25 phages (F1,14 = 132.4, P < 0.001) (Fig. 1B). The phages (past) and phages isolated from days 24
descended from the inoculated phage population. density-increasing effect of phages in the absence (contemporary) and 48 (future) within each rep-
In an attempt to disentangle effects of the phys- of the natural community is surprising, and its licate. Similarly, we measured the resistance of
ical and biotic components of the soil environ- potential implications for the therapeutic use of ancestral (day 0) bacteria (past) and bacteria from
ment, we cultured our bacteria and phage in sterilized phages warrants extensive future investigation. days 24 (contemporary) and 48 (future) to phages
soil, in which the resident microbial community However, we speculated that phages selectively from day 24. In contrast to results in laboratory
had been reinoculated in some replicate com- killed growing and not stationary cells (19), and media, bacteria were more resistant to their con-
munities but not in others. Samples from the the presence of high frequencies of growing cells temporary than past and future phages (Friedman
replicate soil communities (eight per treatment [growth advantage in stationary phase (GASP) test of effect of time, with replicate fitted as a
combination) were collected every 4 days for 24 mutants] under nutrient limitation reduced pop- blocking factor: P < 0.01; n = 16 populations)
days, with a further sample taken after 48 days. ulation sizes (20). In contrast, selective elimina- (Fig. 2, A and B), and phages were least infective
At each time point, we determined densities and tion of growing P. fluorescens cells by phages did to contemporary than past and future bacteria
(P < 0.01; n = 16 populations) (Fig. 2, C and D),
with no effect of the presence of the natural com-
munity on resistance/infectivity patterns (Mann-
Whitney tests: P > 0.2 for resistance/infectivity at
each time point, and changes in time). This sig-
nificantly greater resistance of bacteria to con-
temporary than to noncontemporary phages (and
corresponding lower infectivity of phages) held
when comparisons were made only between
days 24 and 48 (Wilcoxon paired sample test:
P = 0.02; n = 16 populations). We extended our
measurements to all sampled time points and
found the frequency of bacteria resistant to the
ancestral (time zero) and contemporary phages
to be approximately 2 and 10%, respectively
(paired t tests of resistance to contemporary ver-
sus ancestral phages, averaged through time: t =
3.5, P < 0.01; t = 10.2, P < 0.001, n = 16 pop-
ulations, for absence and presence of natural
community, respectively) (Fig. 3), with the dif-
ference in resistance to contemporary and ances-
tral phages greater for populations evolved in the
presence of the natural community (independent
sample t test: t = 6.0, P < 0.01, n = 16 popula-
tions). Taken together, these results demonstrate
that bacteria and phage rapidly evolve, but that
they are not undergoing arms race coevolution.
The data are, however, consistent with co-
evolution in which parasite genotypes specialize
on host genotypes, and fitness of a given geno-
type fluctuates through time (fluctuating selec-
tion dynamics) (2, 5, 6). If parasites adapt more
Fig. 2. Coevolutionary dynamics of bacteria and phages. Proportion of P. fluorescens isolated from day rapidly than do hosts, fluctuating selection dynam-
24 resistant to ancestral (day 0) phage, contemporary (day 24), and future (day 48) phage populations ics are on average expected to result in parasites
evolved in the (A) absence and (B) presence of the natural community. Proportion of ancestral (day 0), better adapted to their contemporary compared
day 24, and day 48 P. fluorescens susceptible to day 24 phages evolved in the (C) absence and (D) with past and future hosts, and vice versa if hosts
presence of the natural community. Individual thin lines indicate the eight separate replicates in each adapt more rapidly than do parasites (6). Our data
treatment; bold lines indicate means for all populations. show the latter pattern, unequivocally demon-
Fig. 3. Resistance of bacteria to ancestral and contemporary phages. Pro- presence of the natural community for all populations through time. No
portion of P. fluorescens resistant to the common ancestral (day 0) (○) and resistance to phages was detected in P. fluorescens populations evolved in the
contemporary (●) phage populations evolved in the (A) absence and (B) absence of phages.
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REPORTS
microbial community. Coevolution altered eco- 7. C. M. Lively, M. F. Dybdahl, Nature 405, 679 (2000). 24. A. Agrawal, C. M. Lively, Evol. Ecol. Res. 4, 79
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in high-nutrient broth, coevolutionary dynam- 11. B. R. Levin, J. J. Bull, Nat. Rev. Microbiol. 2, 166 27. J. T. Lennon, S. A. M. Khatana, M. F. Marston,
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gest that rapid bacteria-phage coevolution, and 14. M. Vos, P. J. Birkett, E. Birch, R. I. Griffiths, A. Buckling, manuscript. The work was supported by the European
not just purely ecological interactions, are likely Science 325, 833 (2009). Research Council. P.G. was supported from Ministerio
15. N. L. Held, R. J. Whitaker, Environ. Microbiol. 11, de Ciencia e Innovación (MICINN, Spain) by National
to be crucial in explaining the structure, popula- 457 (2009). Mobility Program of Human Resources “Jose Castillejo.”
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natural microbial communities. (2005). assigned to the European Nucleotide Archive, European
17. Materials and methods are available as supporting Molecular Biology Laboratory–European Bioinformatics
material on Science Online. Institute, under accession numbers FR746065 to
References and Notes 18. A. Buckling, P. B. Rainey, Proc. R. Soc. Biol. 269, FR746094.
1. J. J. Bull, Evolution 48, 1423 (1994). 931 (2002).
2. W. D. Hamilton, Oikos 35, 282 (1980). 19. M. H. Adams, Bacteriophages (Wiley, New York, 1959). Supporting Online Material
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Fig. 1. (A) Population-specific estimates of aerobic (colored lines), cardiac two temperature histograms are presented, one for the historical river entry
(black lines), and heart rate (gray lines) scopes in relation to water tem- (blue), the other for the current early entry phenomenon (gray) (16). Aerobic
perature. The frequency histogram shows simulated distributions of average scope data for Gates and Weaver sockeye salmon provided by (17). (B) Map
river temperatures encountered by individual modeled fish from each pop- of the Fraser River, British Columbia, Canada, indicating the spawning loca-
ulation during their upriver migration from 1995 to 2008. For Weaver fish, tions for the eight sockeye salmon populations included in this study.
a range of river migration difficulties. Popula- shed. In addition, significant differences in max- heart rate collapsed at a lower temperature than
tions were first categorized into those that pass imum aerobic scope among the populations (table aerobic scope in two populations (Fig. 1A), sug-
through Hells Gate, a hydraulically challenging S4) were positively correlated with the distance gesting that reduced scope for heart rate above
river segment (upriver populations) and those to the spawning ground (Fig. 2A and table S5). Topt may limit maximum cardiac output and the
that do not [coastal populations (table S1)]. Mi- These results suggest population level adapta- capacity of the cardiorespiratory system to trans-
gration difficulty was further quantified using tion of maximum aerobic scope to the selection port oxygen. Interestingly, neither maximum car-
various environmental characteristics: distance, imposed by river conditions encountered during diac scope nor maximum scope for heart rate
elevation gain, temperature, migration rate, du- migration (18–20). differed significantly among the upriver popu-
ration, work, river slope, and migration effort Given that cardiac capacity and aerobic lations tested (table S4). Therefore, future studies
(Fig. 1B and table S1). We predicted that mi- scope are tightly related (21), we expected pop- should examine cardiovascular function in coastal
gration distance, elevation gain, and work would ulations with the greatest migratory demands to populations and consider the possibility of pop-
exert the strongest selection pressure on aerobic display similar adaptations in cardiac morphol- ulation differences in arterial oxygen-carrying
scope, given their importance in selecting for ogy and performance. Relative ventricular mass capacity and tissue oxygen extraction ability to
morphological traits (12). We measured individ- (RVM), percentage compact myocardium (% com- provide greater insight into local adaptation of
ual cardiorespiratory performance (N = 97) as pact; the proportion of the ventricle supplied cardiovascular performance.
a function of temperature in four populations with coronary blood flow), and relative dry com- Next, we sought a mechanistic explanation
(16). Many fish could not swim at the highest pact mass (RDCM) significantly differed among for the observed intraspecific variation in ther-
test temperatures, presumably reflecting a col- populations (table S4). All three morphological mal tolerance. Cardiac adrenergic stimulation
lapse of aerobic scope above Topt (Fig. 1A and parameters were significantly greater for upriver protects salmonid cardiac function at low tem-
fig. S2). Moreover, aerobic scope curves for compared with coastal populations (P < 0.01; t peratures (23, 24) and against the negative ef-
each population were significantly related to the test), suggesting that the hydraulically challenging fects of acidosis and hypoxia during exercise
historic range in river temperature they expe- sections of the river impose selection on heart (25), but protection diminishes at high temper-
rienced (table S2), a finding consistent with two morphology. In addition, correlations between atures associated with declining aerobic scope
additional Fraser River sockeye salmon popula- cardiac morphology and migration difficulty (23–25). Therefore, we hypothesized that the un-
tions (17) (Fig. 1A and table S2). The coastal (Fig. 2, B to D, and table S5), and maximum usually broad and high thermal tolerance of the
Weaver sockeye salmon experience the coldest aerobic scope with RDCM (table S5), provide Chilko population would reflect a greater density
temperatures and had the lowest Topt (14.5°C), promising evidence for local adaptation to river of adrenaline-binding ventricular b-adrenoceptors
whereas the upriver populations experience sim- conditions on an even finer scale (18–20). Fur- compared with the comigrating Nechako popu-
ilar river temperatures and accordingly had a thermore, aerobic scope, cardiac scope, and scope lation that has a narrower and lower thermal
similar Topt [range 16.4° to 17.2°C (Fig. 1A and for heart rate were all positively correlated (fig. tolerance (Fig. 1A and table S3). We determined
tables S1 and S3)]. The Chilko population S3) and varied in parallel with river temperature ventricular b-adrenoceptor density (Bmax) and
displayed an unusually broad optimal thermal (Fig. 1A), suggesting that the temperature de- binding affinity (Kd) in fish that had been held
range (Fig. 1A and table S3) that corresponded pendence of cardiac performance is linked to for 4 days at 13°, 19°, or 21°C. At all three
with the lower temperatures encountered during that of aerobic capacity at the population level. temperatures, Chilko had a significantly higher
their difficult migration in the Chilcotin water- Corroborating earlier work (21, 22), scope for Bmax compared with Nechako sockeye salmon
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REPORTS
Fig. 2. Linear regressions between migration difficulty indices and (A) ficulty indices with the strongest Pearson correlation coefficient are
aerobic scope at Topt, (B) relative ventricular mass, (C) relative dry presented (table S5). FM, Fraser River discharge; DM, distance to spawning
compact mass, and (D) percentage compact myocardium (tables S1, S3, grounds. Only female sockeye salmon were compared for heart mor-
and S4). Population means T SEM are presented. The migration dif- phology (16).
(Fig. 3) [Kd did not differ (fig. S4)] and more Fig. 3. Ventricular b-
than twice that previously measured for salmonids. adrenoceptor density
In contrast to rainbow trout (24), Bmax increased (Bmax). Significant dif-
significantly when Chilko sockeye salmon were ferences between pop-
warmed to 19° and 21°C from 13°C. Consequent- ulations are indicated
ly, elevated ventricular b-adrenoceptor expres- by * (P < 0.001). Signifi-
sion for Chilko sockeye salmon may provide cant differences between
greater cardiac capacity and protection at tem- temperature treatments
perature extremes, expanding their thermal tol- existed only for Chilko
sockeye salmon and are
erance compared with the Nechako population.
indicated by differing let-
Our results support the hypothesis that con-
ters (i.e., a and b; P <
tinued increases in summer river temperatures 0.001, 2-way analysis of
will result in population-specific responses of variance). Rainbow trout
sockeye salmon (5). Comparison of temperature were included as a ref-
profiles for aerobic scope (as a percentage of max- erence group to confirm
imum) among six populations (Fig. 4) reveal the assay technique.
clear differences across populations in Tcrit (when
aerobic scope is zero and fish survival is pas-
sive, time-limited, and supported by anaerobic
metabolism). Although upstream migration is
clearly impossible at Tcrit, exactly how much aero- reached their spawning area at 18° to 21°C when toric temperatures encountered (table S3), we
bic scope is required for successful river mi- aerobic scope is 0 to 68% of maximal (5, 26)]. suggest that perhaps ~90% of aerobic scope is
gration is unknown. A biotelemetry study with However, given that all the upriver populations necessary over a broader time scale for upriver
Weaver sockeye salmon suggests that at least studied here have 89 to 97% of maximum aer- populations experiencing greater migration dif-
50% of aerobic scope is needed [<10% of fish obic scope at the upper 90th percentile of his- ficulty. Accordingly, temperatures exceeding the
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AAAS/Science Business Office Feature LIFE SCIENCE TECHNOLOGIES
SMALL DEVICES
ric Schulze used to think the best lab devices are the ones
globally, pretty much at most major biotechs and most major cially beneficial in developing countries. The company has sold
academic institutions,” she adds. According to Johnston, the more than 300 instruments to laboratories in rural areas of Africa
company sold more than 1,000 units in the first six months after for monitoring HIV therapy. The instruments are not currently ap-
its introduction. proved for HIV monitoring in North America, Europe, or Japan.
Scepter uses a Coulter principle-based system, with a current Most of these new devices feature touch screen interfaces
across an opening that breaks every time a cell passes through, and many, like Illumina’s MiSeq DNA sequencing system, have
creating voltage changes that the device records and plots, dramatically simplified sample preparation and workflow. The
giving readings within 20 seconds. Its operating range is from MiSeq takes up two square feet on the bench, and continued »
10,000 to 500,000 cells per milliliter. Users can store up to 72
histograms on the device, while its battery will run for at least 72
hours. They can also upload data from the Scepter to a PC. EMD
UPCOMING FEATURES
Millipore plans to release a Mac-compatible version this year.
Cell Separation Technologies—May 6
TECHNOLOGY AT YOUR FINGERTIPS
Food Safety—June 24
New compact devices like the Scepter are about more than
just saving benchtop space, although that’s a key consideration. Proteomics: Protein Folding—August 26
Manufacturers are increasingly building them to be multifunc-
SMALL DEVICES
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AAAS/Science Business Office Feature LIFE SCIENCE TECHNOLOGIES
SMALL DEVICES
three separate instruments to dispense, they would typically want with confo-
wash, and serial dilute. There’s quite a cal microscopy, but with a very small
bit more functionality to it.” footprint and for less than $150,000,”
The company also introduced a explains Dennis Donley, group manager
96-channel pipette, the Viaflo 96, last for laser scanning confocal microscopes
January. The device works just like a at Olympus. Compared to some con-
regular Viaflo pipette, times 96, Harkins ventional confocal microscopes that al-
explains. “Rather than create a large ways seem to require tuning and tweak-
piece of automated equipment that is ing, he added, “the FV10i is a shift in the
difficult to operate, we combined the workflow that brings the technology to
well-known Viaflo pipette user-interface the people—like when cars stepped up
with the effortless control of a joystick- to auto transmission.”
like pipette handle.” The handle “acts
just like a handheld pipette,” he adds, COMPACT IMAGER SLASHES
allowing users to easily move between PROCESSING TIME
multiple standard plates and reservoirs. Bio-Rad’s Gel Doc EZ Imager is another
The handheld approach also allows for newly compact device with major advan-
touching off and for partial loading of pi- tages in terms of ease of use. The EZ Im-
pette tips. It takes up a square foot of ager has about half the footprint of the
bench space and is about a foot and a Gel Doc XR+, while the new device is
half tall. just 15 inches tall, compared to about 38
“People don’t need to read the manual inches for its predecessor. “It’s also sig-
to know how to use it,” Harkins says. nificantly smaller than every other inte-
“Between the ease of use and the “People don’t need to grated gel documentation system on the
price point, we think it’s something that market,” says Ryan Short, imaging mar-
any lab could really benefit from.” The
read the manual to know keting manager at Bio-Rad Laboratories.
base cost is less than $15,000; other how to use it.” What’s more, says Short, “it truly is a
96-channel instruments for similar appli- one-button-push imaging system.” The
cations can cost three times as much, user places a gel on a tray, inserts it into
Harkins estimates. the machine, pushes a green button
that will run a predefined protocol (which can include multiple
TEACHING AN OLD ROBOT NEW TRICKS analyses), and gets a publication-quality image back within
Redd & Whyte’s Preddator S1 Microplate Dispenser offers yet five seconds. “To acquire an image on most systems and to
another entry into the compact dispensing market. “Its really do an analysis can take five minutes per gel,” Short adds. “In
key features are that it can dispense all types of reagents,” ex- this case, we’re doing it in about 10 seconds.” The device can
plains the virtual start up’s CEO, Roger Poole. “It can do that ac- also perform stain-free imaging using precast gels, saving time
curately and repeatedly, and that’s the key. That’s what scientists by transforming traditional two-hour staining protocols into one
have been missing out on.” five-minute step.
The Preddator can dispense cells, gels and matrigels, oils and The device offers four trays in all: a UV tray, a white tray (for
greases, and other complex materials, and has been specifically Coomassie blue, copper, silver, and zinc stains), a blue tray for
designed to avoid the tip blockage that plagues other dispensing nondestructive nucleic acid applications (SYBR Green), and a
devices. stain-free tray for use with stain-free gels. Prices can range from
Designed as a “value-added” version of a robot long used in $9,000 to $13,000, depending on desired applications; Short
the automotive and printed circuit board market, the Predda- says an EZ Imager well equipped for most applications would
tor is now available in four-channel and single-channel versions. run about $10,000.
“One of the reasons why we chose that specific robot is it has “It’s safe to say that we see this as the way of the future,”
a very small footprint and a very open architecture, so the re- says Short. “Our customers appreciate the smaller format. We’ll
search scientists can get at it,” Poole says. continue to develop products down this line.”
Compactness has been key for Olympus in developing The FDA’s Schulze says he’d love to see more lab devices that
two new products: the FluoView FV10i, a completely self- look like consumer electronics; in fact, he argues, why not an
CREDIT: © ISTOCKPHOTO.COM/GERENME
contained laser-scanning microscope that sits comfortably on app that allows scientists to collect data and beam it to a col-
the benchtop, and the FSX100 Bio Imaging Navigator, another league, or beam it up into “the cloud” for sharing with the scien-
compact microscope. The first generation FV10i uses an oil- tific community as a whole.
based objective, and Olympus has developed a new version “The fact that smartphones aren’t used for this kind of thing, it
with components “inside the box” that will allow the user to kind of blows my mind,” he says.
do long-term, live-cell imaging, while using carbon dioxide, heat,
a water objective, and hardware to ensure that the sample will Anne Harding is a freelance science writer based near New York City.
stay hydrated.
“This allows researchers to accomplish almost everything that DOI: 10.1126/science.opms.p1100054
Electronically submit your new product description or product literature information! Go to www.sciencemag.org/products/newproducts.dtl for more information.
Newly offered instrumentation, apparatus, and laboratory materials of interest to researchers in all disciplines in academic, industrial, and governmental organizations are
featured in this space. Emphasis is given to purpose, chief characteristics, and availability of products and materials. Endorsement by Science or AAAS of any products or
materials mentioned is not implied. Additional information may be obtained from the manufacturer or supplier.
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POSITIONS OPEN POSITIONS OPEN
online @sciencecareers.org
OPEN FACULTY SEARCH
Dorothy M. Davis FACULTY POSITION OPENING at
Heart and Lung Research Institute Hunan University
The Ohio State University The College of Biology at Hunan University
The Dorothy M. Davis Heart and Lung Research is expanding and will recruit up to 10 faculty
Institute (DHLRI) at The Ohio State University Med- in 2011. We welcome applicants in the follow-
ical Center is a 100,000 square foot, comprehensive, ing three widely defined areas: Life Sciences
state-of-the-art research facility opened in October (plant molecular biology and plant biotechnol-
2000. The DHLRI is under new leadership and initiat- ogy), biomedical engineering, and molecular med-
ing a search for outstanding scientists for tenure-track icine. Applicants should have a Ph.D. or M.D.
faculty positions at the ASSISTANT or ASSOCIATE in related areas such as biology, medicine, bio-
PROFESSOR level. Candidates should have a relevant medical engineering, and chemistry, etc. Appli-
doctoral degree, at least two years of postdoctoral train- cants at all academic levels are welcome to apply
ing, a commitment to basic/translational cardiovascular with the following materials: curriculum vitae, re-
or pulmonary science, and a history of strong research search and teaching statements, and the names
productivity. Individuals will be evaluated on their abil- of five references. These materials can be sent to
ity to establish innovative independent research pro- e-mail: hudabiology@gmail.com. Competitive
grams as well as develop collaborative areas of focus salary and startup will be offered based on qual-
with existing programs. Individuals must have strong ifications. Review of applications will begin on
communication and interpersonal skills. May 1, 2011, and continue until the positions
Applications should include a detailed curriculum vi- are filled. Hunan University is a 985 Project
tae, a description of research experience, and statement University with intensive research and teaching
concerning the nature of the planned independent re- programs.
search program. Information about the University and
the DHLRI can be obtained by accessing our websites:
http://www.osu.edu and http://heartlung.osu.edu.
Application material should be sent to: ASSISTANT PROFESSOR
Lorri A. Fowler, MBA ACADEMIC PATHOLOGIST
Administrative Director New York College of Osteopathic Medicine (NYCOM)
473 West 12th Avenue of New York Institute of Technology (NYIT) seeks an
Columbus, Ohio 43210-1252 Academic Pathologist/Assistant Professor (rank nego-
E-mail: fowler.142@osu.edu tiable) for its Biomedical Sciences department. Under
The Ohio State University is an Equal Opportunity/Affirmative the leadership of a new Chair, the department of Bio-
Action Employer. Women and members of underrepresented minority medical Sciences seeks to build competitive research
groups are especially encouraged to apply. programs. The successful candidate will focus primarily
on research (60 to 75 percent effort) with the remain-
ing effort in teaching and service. The preferred area
POSTDOCTORAL POSITION of research is Cardiovascular but other areas will be
School of Molecular Biosciences considered.
Washington State University A private, non-profit, independent institution of
Postdoctoral position to study the role of chromatin higher education, NYIT attracts students from 106
structure in regulating DNA repair in yeast (e.g., nations and 50 states. NYIT_s 15,000 students are en-
Kyriss et al., Mol. Cell. Biology 30:3503, 2010; Nag rolled in seven schools and attend classes at the univer-
et al., Nucleic Acids Res. 38:1450, 2010; Chaudhuri sity_s New York campuses in Manhattan (at Columbus
et al., Nucleic Acids Res. 37:1690, 2009). The successful Circle) and on Long Island (on 300 beautiful, wooded
applicant will investigate the role of histone domains acres in Old Westbury), at five sites/campuses around
and modifications in excision repair as part of a joint the world, and online. Offering more than 90 courses
collaborative project between Dr. John Wyrick of study leading to undergraduate, graduate, and pro-
(website: http://www.wsu.edu/Èjwyrick) and Dr. fessional degrees, NYIT has conscientiously followed
Michael Smerdon (website: http://www.wsu.edu/ its mission of providing career-oriented professional
Èsmerdon/index.html) in the School of Molecular education. Its academic programs, in areas including
Biosciences at Washington State University. Candidates engineering, architecture, business, communication and
should have a Ph.D. in molecular biology, biochemistry, graphic arts, and medicine, prepare students for some
or genetics. Prior experience with yeast is not required. of the most in-demand careers in today_s global econ-
Send statement of interests, curriculum vitae, and names omy. NYIT has been recognized by The Chronicle of
of three references to e-mail: dsmerdon@wsu.edu. Higher Education as a BGreat College to Work For
WSU is an Equal Opportunity/Affirmative Action Educator and 2010[ and has been consistently ranked in Tier 1 by
Employer. U.S. News & World Report for more than a decade.
The successful candidate will possess a D.O., M.D.,
D.V.M., and/or Ph.D. in Pathology and two or more
TENURE-TRACK VISITING ASSISTANT OR years of postdoctoral teaching experience. NYCOM of-
ASSOCIATE PROFESSOR of fers a competitive salary and attractive benefits package
Dental Sciences and Biological Sciences including tuition remission, along with a professional
The Departments of Dental Sciences (website: environment designed to enhance your career devel-
http://www.isu.edu/dentsci/) and Biological Sci- opment. To apply, please electronically send your cover
ences (website: http://www.isu.edu/departments/ letter and resume to: Dr. A. Martin Gerdes, Chair of
bios) at Idaho State University seek applicants for a Biomedical Sciences at e-mail: agerdes@nyit.edu or
tenure-track Visiting Assistant/Associate Professor mail to: P.O. Box 8000 Northern Blvd, NY 11568-
position to begin August 2011. Applicants must have 8000. Equal Opportunity Employer for Minorities/Females/
a Doctorate (postdoctoral experience preferred). For Persons with Disabilities/Veterans.
a complete job description, requirements, and appli-
cation instructions visit us at website: http://www.
isujobs.net. Priority consideration will be given to SENIOR POSTDOCTORAL ASSOCIATE
those who apply by May 1, 2011; position will remain Boston University
open until filled. ISU is an Equal Opportunity/Affirmative Required expertise in transgenic rats, ultrasound
Action Employer. We have an institution-wide commitment to molecular imaging, arterial stiffness analysis, and sono-
inclusion and diversity and encourage all qualified individuals to poration, FACS, MoFlo, confocal microscopy. M.D.
apply. Veterans’ preference. Upon request, reasonable accommo- or Ph.D., $40,000/year. Send curriculum vitae to Nancy
dations in the application process will be provided to individuals Clinton, nclinton@bu.edu. Equal Opportunity Employer/
with disabilities. Affirmative Action.
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Tenure-Track/Tenure-Eligible Investigator
Hepatitis Virus Vaccine Research
The Laboratory of Infectious Diseases Additional information about Applicants must have an M.D., Ph.D.,
(LID), Division of Intramural Research LID is available online at M.D./Ph.D., or equivalent degree in
(DIR), National Institute of Allergy and www.niaid.nih.gov/LabsAnd a relevant field with extensive
Infectious Diseases is seeking an Resources/labs/aboutlabs/lid. postdoctoral experience, as well as a
outstanding individual to study the strong publication record demonstrating
molecular biology and pathogenesis of DIR provides support for salary, potential for creative research.
hepatitis C virus and to develop and test technical personnel, postdoctoral Interested candidates may contact Jeffrey
candidate vaccines, immunotherapy, fellows, equipment, and research Cohen, LID Chief, at 301-496-5265 or
and immunoprophylaxis strategies. supplies. Salary is dependent on jcohen@niaid.nih.gov for additional
Studies of other human hepatitis experience and qualifications. information about this position.
viruses are also encouraged.
NIAID
characterization of candidate vaccines, detailed statement of how your expertise can contribute to the
and testing of vaccines and antibodies success of the hepatitis virus program to Ms. Bao-Hahn Ngo at
in animal models including nonhuman LIDViralHepatitisSearch@niaid.nih.gov. In addition, three
primates. The incumbent will benefit letters of reference must be sent directly from the referee to
from unique opportunities to interact Dr. Bernard Moss, Chair, NIAID Search Committee, c/o
with other members of LID and DIR who Ms. Bao-Hahn Ngo at LIDViralHepatitisSearch@niaid.nih.gov
perform basic and translational research or 10 Center Drive, MSC 1356, Building 10, Room 4A22,
on hepatitis and other viruses. Bethesda, MD 20892-1356. E-mail is preferred.
Applications will be reviewed starting on April 25, 2011
LID has a diverse portfolio of virus and will be accepted until the position is filled. Further
vaccine research and an extensive information regarding DIR laboratories is available
collection of hepatitis specimens from at www.niaid.nih.gov/about/organization/dir,
humans and nonhuman primates. and information on working at NIAID is available
Access to nonhuman primates, state- at www.niaid.nih.gov/careers/dat.
of-the-art core research support, and A full package of benefits (including retirement and health,
the NIH Clinical Center—a premier life, and long-term care insurance) is available. Women and
research hospital on the main NIH minority candidates are especially encouraged to apply. U.S.
campus—is available. citizenship is not required.
U.S. DEPARTMENT OF HEALTH AND HUMAN SERVICES National Institute of Allergy and Infectious Diseases
National Institutes of Health
Proud to be Equal Opportunity Employers
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FACULTY POSITION
The Vaccine and Infectious Disease Division (VIDD) at the Fred Hutchinson
Assistant Professor in Nutritional Sciences Cancer Research Center (FHCRC) is soliciting applications to fill a faculty
position with an individual conducting innovative translational research in
The Department of Nutritional Sciences in the Faculty of Medicine pathogen-associated cancers. Areas of research interest may include viral
invites applications for a tenure-track Assistant Professorship. The immunology, mechanisms of oncogenesis of cancer-related pathogens, vac-
research interests of the Department range from basic science to clinical cine development or virus/pathogen discovery.
investigation and population health. Applications are encouraged from VIDD is one of five divisions within the FHCRC that focuses on a wide range
candidates with an excellent record of research accomplishments in any of infectious pathogens. There are opportunities for translational research as the
one of our four core research platforms: healthy human development Seattle Cancer Care Alliance (SCCA) provides treatment and care for interna-
and aging; nutrigenomics and personalized nutrition; chronic disease tional and domestic patients with a wide variety of cancers, including the hema-
prevention and treatment; and nutrition, food and public policy, profiled topoietic stem cell transplant population. Valuable resources will be available
on www.utoronto.ca/nutrisci/. Successful candidates will be expected to the candidate through ongoing collaborations between the FHCRC, SCCA
to mount an independent, externally funded research program and to and the Uganda Cancer Institute. These collaborations provide a rich source
participate in some teaching at the undergraduate or graduate level. for translational research in HIV-related malignancies, especially Kaposi’s
sarcoma and Burkitt’s lymphoma. Candidates at any rank will be considered.
Applicants should send curriculum vitae, description of research interests Opportunities exist for joint (secondary) appointment in the Divisions of Clinical
and the names and addresses of 3 references by April 30, 2011 to: Research, Public Health Sciences or Human Biology at FHCRC, as well as an
Dr Mary L’Abbé, Chair, affiliate appointment at the University of Washington.
Department of Nutritional Sciences VIDD occupies state-of-the-art research laboratories on a beautiful lakeside
Faculty of Medicine, University of Toronto campus. The Center offers outstanding shared resources, including computa-
150 College St., FitzGerald Building tional biology, genomics, proteomics, and imaging facilities. The Center has
Toronto, ON, Canada M5S 3E2 active training programs for graduate students and postdoctoral fellows and
offers exceptional opportunities for scientific interactions with other inves-
Mary.Labbe@utoronto.ca
tigators in the Seattle area. Additional information about VIDD and Center
Phone: 416-978-7235 Fax: 416-971-2366 can be found at: http://www.fhcrc.org/science/vidd/about.html and http:
//www.fhcrc.org/science/.
The University of Toronto is strongly committed to diversity within its
Candidates should submit a curriculum vitae, a concise statement of research
community and especially welcomes applications from visible minority
plans, and names of three references to Dr. Corey Casper, 1100 Fairview
group members, women, Aboriginal persons, persons with disability, Ave. N, M1-B140, Seattle, WA 98109. The application deadline is open until
members of sexual minority groups and others who may contribute to filled.
further diversification of ideas. All qualified candidates are encouraged
The Fred Hutchinson Cancer Research Center is an Equal Opportunity
to apply; however, Canadians and permanent residents will
Employer committed to work force diversity. Applications from female and
be given priority. minority candidates are strongly encouraged.
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School of Public Health
Salary Range:
Lecturer: £42,500 - £47,450 p.a.
Senior Lecturer/Reader: £52,400 minimum p.a. (level of appointment dependent
on experience)
The School of Public Health was recently launched with the aim of addressing the major
public health challenges of the 21st Century. It undertakes world-class research at local,
national and international levels, with translation into improvements in disease
prevention. The School’s research scored in the top two epidemiology and public health
submissions to the UK’s 2009 Research Assessment Exercise and has a significant
research portfolio with total grants and contracts in excess of £25 million per year.
Applications are now sought for four academic positions in the School of Public Health.
The three posts in the Department of Epidemiology and Biostatistics are based at the
College’s St. Mary’s campus, while the post in the Department of Genomics of Common
Disease is based at the Hammersmith campus. The successful candidates will be
appointed at Lecturer, Senior Lecturer or Reader level and will have a proven, world-
class research track record.
For further details on the School of Public Health see our website:
www.imperial.ac.uk/publichealth
For informal discussions please contact Professor Elio Riboli, (Director School of Public
Health, e-mail: e.riboli@imperial.ac.uk), Professor Paul Elliott (Department of
Epidemiology and Biostatistics, e-mail: p.elliott@imperial.ac.uk), Professor Philippe
Froguel (Department of Genomics of Common Diseases, e-mail:
p.froguel@imperial.ac.uk), Professor Sylvia Richardson (Department of Epidemiology
and Biostatistics, e-mail: sylvia.richardson@imperial.ac.uk).
All posts are full time permanent contracts based at Imperial College London within the
School of Public Health. Further details on the positions can be found at the College
website and our preferred method of application is online via our website
http://www3.imperial.ac.uk/employment Please complete and upload an application form
as directed quoting the relevant reference number.
Committed to equality and valuing diversity. We are also an Athena Silver SWAN Award
winner and a Stonewall Diversity Champion.
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BIO-PROCESSING UNIT
(NATIONAL AGRI-FOOD BIOTECHNOLOGY INSTITUTE) WOMEN IN SCIENCE
(An Autonomous Institute of Department of Biotechnology, Ministry forging new pathways in green science
of Science and Technology, Government of India)
C-127, Industrial Area, S A S Nagar, Phase 8, Mohali, Punjab,
India-160071
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Faculty of Medicine
The Faculty of Medicine of Imperial College London wishes to invite applications for a Professor or
Reader in Preclinical Imaging and Physiology, based on the Hammersmith campus. The successful
applicant will be appointed in the National Heart and Lung Institute (NHLI), if a cardiovascular
researcher, or in alternative departments as most appropriate. The Faculty of Medicine is organised into
six Schools, Institutes and Departments (SIDs), details of which can be found at
http://www1.imperial.ac.uk/medicine/divisions
The post will be full-time and will provide a leadership role for large mammal research and education by
investigators throughout Imperial College London.
The post holder will be responsible for initiating and sustaining research in the new Preclinical Imaging
Centre (PCIF), based on the Hammersmith campus. This was commissioned in 2010 and houses an
angiography suite integrated with 3T MRI, as well as an integrated PET-CT and a state-of-the-art facility
comprised of a digital Siemens Artis Zee fluoroscopy system with full haemodynamic monitoring. In
addition to its local role, the PCIF is intended to provide a national facility for large mammal research, in
particular using porcine and ovine in vivo models, with users drawn both from academia and industry.
The successful candidate will be a leader in the field of large mammal physiology, with extensive
research experience, including hands on experience of acute and chronic animal models of
cardiovascular disease. The post holder will also be expected to have hands on experience in one or
more of the following: animal imaging with MRI, PET-CT or percutaneous cardiovascular
catheterisation. The successful candidate will also have gained high achievement in a chosen field,
reflected in national and international reputation.
A proven record of extensive publications and successful research funding is essential, as is experience
of undergraduate and postgraduate teaching, and with also a proven ability to supervise research staff
and students.
The appointed individual will be expected to develop a personal program of competitive, peer-reviewed
research relevant to the Institute’s cardiovascular strategy, and also to champion, facilitate and promote
the use of the PCIF both within Imperial College London and by appropriate external users. You will play
a major role in enabling the translation of biomedical research outcomes from rodents into clinical
research and eventually clinical practice.
The level of the appointment will be determined by the appointed candidate’s level of attainment.
For informal enquiries please contact Professor Michael D. Schneider on +44 (0)207 594 3027;
e-mail: m.d.schneider@imperial.ac.uk
Our preferred method of application is online via our website at the following link:
http://www3.imperial.ac.uk/employment (select “Job Search”). Please complete and upload an
application form as directed and submit any other relevant supporting documents such as your full CV.
Please quote reference number: RB016-11.
Alternatively, you may e-mail your application and CV to Maria Monteiro; m.monteiro@imperial.ac.uk;
tel: +44 (0)207 594 5498.
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Neuroscience
Center Director
Download The University of Texas Health Science
Center at San Antonio (UTHSCSA) has
today. Neuroscience and has provided generous space for the establishment of a
Neuroscience Research Center in the South Texas Research Facility (STRF).
The STRF, now in the final stages of construction, is a state-of-the-art, the-
matic Research Building that is slated for occupancy in the fall of 2011.
ScienceCareers.org/booklets The latest information about the STRF may be found on its website: http:
//research.uthscsa.edu/STRF/index.shtml. We are recruiting a founding
Director that can develop and lead the Neuroscience Center. The dedicated
space within the STRF is capable of housing 12-15 Neuroscientists. The
Director, along with a select group of active UTHSCSA Neuroscientists that
will move into the STRF, will play a key role in the recruitment of additional
investigators to this group.
CAREER Careers Away UTHSCSA is a research institution intent on establishing itself as a premier
Health Science Center in the United States. The STRF is strategically located
TRENDS from the Bench Advice and Options for Scie
ntists
on a section of campus adjacent to the newly-constructed, state-of-the-art
Medical Arts and Research Center (MARC), the world-renowned Research
Imaging Institute (RII), and several other research facilities. The UTHSCSA
campus is located in the Northwest section of San Antonio and sits as a
gateway to the picturesque Texas Hill Country. San Antonio is a vibrant,
dynamic, and multicultural city with much to offer including an attractive
cost-of-living and a resilient economy.
Applications should include a curriculum vitae, a list of four references, as
well as statements of research interests and academic vision. The search
will remain open until the position is filled. Send materials electronically to:
Randolph D. Glickman, Ph.D.; E-Mail:NeuroSearch@uthscsa.edu
All faculty appointments are designated as security sensitive positions.
The University of Texas Health Science Center at San Antonio is an Equal
Employment Opportunity/Affirmative Action Employer.
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Yale Cancer Center
Cancer Biology Institute Health Sustainability
The Yale Comprehensive Cancer Center, its brand new Cancer Biology Insti-
tute, and the Yale School of Medicine invite applications from basic science
Policy Technology
investigators for junior or senior appointments with interests in cancer biology,
in the areas of cancer genetics and genomics, signal transduction, structural
LIVING THE
biology, proteomics, and mass spectrometry, as well as drug discovery. The
Cancer Biology Institute is one of 5 newly formed multi-disciplinary research
institutes at Yale’s West Campus, a 136 acre parcel located 7 miles from Yale’s
New Haven campus that includes 20 buildings and 1.6 million square feet
of research, office, and warehousing space. Additional West Campus assets
include the Institute of Chemical Biology, Institute of Microbial Diversity,
Institute of Systems Biology, Institute of Biodesign, as well as core facili-
ties in high throughput cell biology, small molecule discovery, and genomic
analysis. The position will have a role in defining and implementing the vision
for cancer biology research at Yale going forward. This includes develop-
ing translational research opportunities with the recently opened Smilow
Cancer Hospital at Yale-New Haven. Appointment at Yale Medical School
is available in a number of departments and will be commensurate with a
PROMISE
demonstrated record of scholarly achievement. Of particular importance is
experience in one or more of the following; a record of original research in
cancer biology, independent extramurally funded laboratory investigation
for senior applicants, engagement in translational research activities, and/or
the development of strong cooperative teams across disciplines. Women and
minority candidates are urged to apply.
Please submit a letter describing qualifications, with a CV and three letters
of reference by [30 days from publication date] to: Dr. Joseph Schlessinger,
Director, Cancer Biology Institute, Yale Cancer Center, c/o Vickie John-
son, 333 Cedar St., PO Box 208028, New Haven, CT 06520-8028.
Yale University is an Equal Opportunity/Affirmative Action Employer.
INNOVATIVE THINKING
DEANS: Three Posts – Direct Recruitment or Deputation
(Advt. No.NABI-5/2011) BREAKTHROUGH RESEARCH
The Department of Biotechnology, Government of India has REAL-WORLD SOLUTIONS
established National Agri-Food Biotechnology Institute (NABI) in
the ‘Knowledge City’ at Mohali, Punjab. The institute will establish
three Centres of Excellence for research and for preparing human
resource with expertise in high-end knowledge and technology at
the interphase of agriculture, food and nutrition.
NABI invites applications and nominations for the position of
Deans in three departments. The Deans will be responsible for the
HEALTH SOLUTIONS
development of centres for knowledge creation and high learning
at NABI.
(i) Dean, Department of Agricultural Biotechnology UCR neuroscientists are developing
(ii) Dean, Department of Food Biotechnology
(iii) Dean, Department of Nutritional Biotechnology. powerful new diagnostic tools and
The positions are in PB-4 in the Scale Rs. 37400-67000 plus
Grade pay 12000 plus allowances and IP related benefits as per
targeted treatments for autism, fragile
government norms. Interested candidates may visit www.nabi.res. X syndrome and other disorders.
in for details and apply or be nominated by April 30, 2011 to the
following address:
Executive Director, National Agri-Food Biotechnology Institute,
C-127, Industrial Area, Phase-8, SAS Nagar, Mohali-160 071, Punjab, Explore more solutions:
India. Fax No. 0172-4604888. E-mail edoffice-deannabi@nabi.res.
in. A format for the application and other details can be taken from promise.ucr.edu
www.nabi.res.in.
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NATIONAL AGRI-FOOD BIOTECHNOLOGY INSTITUTE FACULTY
(Dept. of Biotechnology, Ministry of Science & Technology, Govt. of India)
OPENINGS
WERE BUILDING A MEDICAL SCHOOL
FROM THE GROUND UPJOIN US.
An exciting opportunity is unfolding at Quinnipiac University. Work has
SCIENTISTS IN FOOD AND NUTRITIONAL BIOTECHNOLOGY AND begun on our School of Medicine, and we are looking for people who
BIOINFORMATICS – DIRECT RECRUITMENT OR ON DEPUTATION will join us in first developing and then implementing a program of study
that is not just practical, relevant, and comprehensive, but visionary as
(Advt. No. 3/2011) well. We are committed to creating a School of Medicine that embraces
The Department of Biotechnology, Government of India has our core values—excellent academic programs, an environment that
established National Agri-Food Biotechnology Institute (NABI) in focuses on the student, and a strong sense of community.
the ‘Knowledge City’ at Mohali, Punjab. The institute nurtures We seek faculty members who are broadly trained in their disciplines and
skills and state-of-art infrastructure for plant genomic, nutritional passionate about educational excellence: faculty members who can
and food science research. The research programmes are meant contribute to multi-discipline, integrated medical instruction in lectures,
to catalyse knowledge-driven growth of agri-food sector in laboratories, and conferences as well as facilitate problem-based learning
with small groups of students. We plan to welcome students in the Fall
India.
of 2013.
A number of positions for faculty at several levels of seniority Currently, we are accepting applications for faculty positions within
are available in the areas of nutritional biotechnology, genomics, the Department of Basic Medical Sciences at the PROFESSOR,
nanoscience and bioinformatics applications to food science. ASSOCIATE PROFESSOR, AND ASSISTANT PROFESSOR
Scientists with creativity, and drive for applied research may apply LEVELS. Previous experience in undergraduate medical education is
individually or as teams in the specified areas of research. required for consideration for appointment at the ranks of associate
professor or professor. We are especially interested in receiving
Interested candidates may visit www.nabi.res.in for details applications from individuals with broad training and experience in
and apply or be nominated by April 15, 2011 to the following the basic medical sciences, including curriculum and course
address: development Candidates must have training and experience in one of
the following areas:
Executive Director, National Agri-Food Biotechnology Institute, ANATOMY NEUROSCIENCES
C-127, Industrial Area, Phase-8, SAS Nagar, Mohali-160071,
BIOCHEMISTRY PATHOLOGY
Punjab, India. Fax No: 0172-4604888. E-mail: edoffice@nabi.res.
in. A format for the application and other details can be taken CELL BIOLOGY PHARMACOLOGY
from www.nabi.res.in. GENETICS PHYSIOLOGY
MOLECULAR BIOLOGY BEHAVIORAL
MICROBIOLOGY SCIENCE
AND IMMUNOLOGY
Call for applications for the positions of
Applicants should submit a letter of interest, a curriculum vitae, a
Research Scientist statement describing your teaching philosophy, a statement of plans
Permanent position, RIKEN, JAPAN for ongoing scholarly activity, and at least three references with
complete contact information.
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WEBINaAbleR
Now avail
on demand.
FACTS&FICTION
Careers in Industry and Academia
Trying to figure out the next step in your career? Join us for a roundtable
discussion that will look at facts and fiction surrounding academic and
industry career options for PhD-level scientists. Get some nuts and bolts
advice on how to research career options, what questions to ask, and
how to best prepare for various careers.
• Do industry and academic careers require different skill sets?
• Do industry jobs have better compensation? Less autonomy?
• Do academic scientists have less work/life balance?
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Heal the sick, advance the science, share the knowledge.
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POSITIONS OPEN POSITIONS OPEN
online @sciencecareers.org
ANATOMY FACULTY
The Basic Sciences Division, Osteopathic Medical
Program of the Georgia Campus of Philadelphia Col-
lege of Osteopathic Medicine (625 Old Peachtree Road
SENIOR RESEARCH ASSOCIATE NW, Suwanee, Georgia) seeks a full-time anatomist at
Cornell Laboratory for Accelerator-based Sciences the ASSOCIATE PROFESSOR level.
and Education Duties include: teaching in the anatomical sciences
The Cornell Laboratory for Accelerator-based Sci- including gross anatomy, histology, and embryology;
ences and Education (CLASSE) seeks an individual to serving in leadership and membership capacities on
take a lead role in the management and development committees; actively pursuing scientific research or
of major accelerator systems. The specific research and other scholarly activity; participating in professional
development activities will be in one of the accelerator- and scientific meetings; preparing and delivering pre-
associated fields that are part of the mission of CLASSE sentations; evaluating student progress; communicat-
(X-ray science, accelerator science, or elementary par- ing evaluations to students and administrative/faculty
ticle physics). These activities will be determined in members; publishing results of scientific research or
consultation with the CLASSE Director, to whom this other scholarly activity in professional journals.
position reports. Duties will also include overseeing ac- Candidates must have five to eight years of expe-
celerator radiation protection and safety systems; per- rience, be capable of teaching medical gross anatomy,
forming radiation shielding calculations using Monte including dissection instruction in a cadaver-based lab-
Carlo codes such as MARS, FLUKA, EGS5, or MCNPX; oratory. Teaching experience in histology and embry-
calculating radioactivity induced in materials by stray ology preferred, with experience in neuroanatomy/
radiation fields around electron accelerators; assessing biomechanics/kinesiology is strongly preferred.
radiation damage in electronics; making measurements This position offers a competitive salary and an ex-
of photon and neutron spectra over a wide energy cellent benefits package. The minimum level of formal
Nontraditional range; and reviewing and approving safety analysis doc-
uments for laboratory operations, working with staff
education required for this position is an earned doc-
torate (i.e., Ph.D., D.O., M.D.) in an appropriate or
Careers: at all levels to analyze and set procedures for unusual
or new safety issues.
related field.
Applicants should submit curriculum vitae that in-
Opportunities Requirements: A Ph.D. in one of the physical sci-
ences or engineering, and several years of experience in
clude the names of three references and a description
of teaching experience to: Rita C. Forde, Director of
experimental high-energy accelerator physics or nu-
Away From clear science and engineering. Must be familiar with bi-
ological effects from natural and man-made sources of
Human Resources, Philadelphia College of Osteo-
pathic Medicine, 4190 City Avenue, Philadelphia,
PA 19131. E-mail: ritaforde@pcom.edu.
the Bench environmental radioactivity; federal, state, and local laws
governing radiation; photon and neutron dosimetry;
PCOM is an Equal Opportunity Employer.
and occupational, chemical, biological, and laser safety.
here.
↓
open to scientists and strategies POSTDOCTORAL FELLOW positions are avail-
you can use to pursue a able at University of California, Los Angeles (UCLA)
to study chromatin remodeling in cardiovascular dis-
nonresearch career. ease. Ongoing research projects are examining the role
of histone variants, global chromatin structure, and
histone modifying enzymes in controlling complex car-
diac phenotypes during health and disease. The proj-
ects employ a systems approach utilizing proteomics,
genomics, network biology, imaging, and animal/cell
physiology. Strong collaborations exist in this highly
creative environment, which spans multiple basic and
Now Available clinical Departments at UCLA, and training opportuni-
On Demand ties exist in the aforementioned high throughput biol-
ogy techniques as well as in cardiovascular physiology.
www.ScienceCareers.org
www.sciencecareers.org/ Successful candidates should have a Ph.D. or MD, ex-
webinar ceptional motivation, and demonstrated research ex-
perience in chromatin regulation and/or proteomics/
genomics. Individuals with extensive credentials in mo-
lecular imaging in eukaryotes are also encouraged to apply.
Please send curriculum vitae, cover letter, and contact
information for three references to: Thomas Vondriska,
Ph.D. (e-mail: tvondriska@mednet.ucla.edu).
√ More scientists agree —we
are the most useful website.
MEDICAL SCHOOL FACULTY POSITIONS www.ScienceCareers.org
The Saint James School of Medicine, an international
medical school (website: http://www.sjsm.org), in-
vites applications from candidates with teaching and/or
research experience in any of the basic medical sciences MARKETPLACE
Produced by the
for its Caribbean campuses.
Science/AAAS Business Office. SENIOR FACULTY positions currently available Promab Biotechnologies Inc.
in Pharmacology, Biochemistry, and Physiology. Ap-
plicants must be M.D., D.O., and/or Ph.D. Custom Monoclonal
Teaching experience in the U.S. system is desirable
but not required. Retired persons are encouraged to Antibody $4,200
apply. Attractive salary and benefits. Submit curriculum >3,000 CLONES WILL BE SCREENED
vitae electronically to e-mail: sjsmcoordinator@sjsm. 1-866-339-0871
org or mail to: HRDS Inc., 1480 Renaissance Drive. www.promab.com info@promab.com
Suite 300, Park Ridge, IL 60068.
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130 1 APRIL 2011 VOL 332 SCIENCE www.sciencecareers.org
2012 AAAS ANNUAL MEETING
16–20 February • Vancouver, Canada
The 21st century is shaping up to be a challenging one. The issues that face us are many: climate change,
energy, agriculture, health, water, biodiversity and ecosystems, population growth, and economic development.
The 2012 program will focus on the complex challenges of the 21st century that are both global in their
scope and profoundly interconnected as well as ways to tackle them on a global scale through international,
multidisciplinary efforts.
Symposium proposals for the 2012 meeting are now being solicited. To submit a proposal, visit
www.aaas.org/meetings. The deadline for submission is Tuesday, 26 April 2011.
Information about the call for poster submissions for the 2012 Annual Meeting will be available at
aaas.org/meetings on 12 May 2011.
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